LGALS1      shRNA in 293T      Batch: BG293LV06

Experiment Information (Status: Sequenced)
BG293LV06-101BG293LV06-102
idx00
TRCN#_or_BGC#TRCN0000057423TRCN0000057423
shRNA_or_gRNA_sequenceCCGGGCTGCCAGATGGATACGAATTCTCGAGAATTCGTATCCATCTGGCAGCTTTTTGCCGGGCTGCCAGATGGATACGAATTCTCGAGAATTCGTATCCATCTGGCAGCTTTTTG
PAM
NameLGALS1LGALS1
Sample_IDBG293LV06-101BG293LV06-102
transduction_Date9/5/249/5/24
daysD4D4
RBP_nameLGALS1LGALS1
qPCR_result97.899.1
Ave_qPCR98.4
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc00
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1018810189




Western Blot
Western Blot info was not avaliable




Experiment Status
BG293LV06-101BG293LV06-102
Sample_IDBG293LV06-101BG293LV06-102
Sample Name
Sample NameLGALS1-BG293LV06-101BLGALS1-BG293LV06-102B
RBPLGALS1LGALS1
Cell_Line293T293T
Exp UID
StatusSequencedSequenced
Status_date2024-10-162024-10-16
ProjectENCORE2ENCORE2
Note
ID1353813539




Library-Prep Information
BG293LV06-101BG293LV06-102
Sample #101102
Sample NameLGALS1-BG293LV06-101BLGALS1-BG293LV06-102B
Sample_Name_Alias
Index Well PositionE06F06
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2024-10-022024-10-02
Lib_IDLib-241002Lib-241002
Tecan_Location
Tecan
Tecan_date
Size_bp281283
Peak_Molarity59.8080.00
libSampleQC_DNA_WellDNA_Library_set72/set1/E6.pngDNA_Library_set72/set1/F6.png
RIN9.89.9
libSample_RNA_WellRNA_Library_set72/set1/E6.pngRNA_Library_set72/set1/F6.png
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2024-10-042024-10-04
Sample_IDBG293LV06-101BG293LV06-102
RBPLGALS1LGALS1
Batch_IDBG293LV06BG293LV06
WB_result0.0000.000
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_SuffixBB
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID45264527




Sequencing Information
BG293LV06-101BG293LV06-102
Sample_IDBG293LV06-101BG293LV06-102
Sample NameLGALS1-BG293LV06-101BLGALS1-BG293LV06-102B
Pool IDPool-241004Pool-241004
LocalServer_folderset72set72
total_reads49,380,35551,063,197
total_aligned_reads46,299,53647,490,550
unique_aligned_reads43,270,77244,442,008
percent_uniqueAligned0.876280.87033
correlation_replicates0.9975700.997570
spikein_reads110,100131,348
percent_spikeins0.002230.00257
original_ReadLength101101
QC_StatusReadyToSubmitReadyToSubmit
ID30953096




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database