NFX1      eCLIP in K562

Experiment Information (Status: Revoked)
567567-control
Exp_UID567567
RBPARK_Exp_name
ENCODE_ACCESSIONENCSR276LGLENCSR821ESG
ENCODE_aliasgene-yeo:567gene-yeo:567-control-control
RBPNFX1NFX1
Cell_LineK562K562
Batch
Exp_typeeCLIPcontrol
ENCODE_Antibody_IDENCAB841CSSENCAB841CSS
AntibodyA302-914AA302-914A
Lot_num11
crosslinking_methodultraviolet irradiationultraviolet irradiation
queried_RNP_size_range175-300175-300
Self_consistency_hg38
rescue_GRCh38
StatusRevokedRevoked
ProjectENCODE3ENCODE3
ID284314




Replicate Information
Rep_UID567_01567_02567_INPUT
Exp UID567567567
Replicate_typerep1rep2control
ENCODE_ACCESSIONENCLB700JSPENCLB188GIDENCLB175DEY
ENCODE_aliasgene-yeo:567_01gene-yeo:567_02gene-yeo:567_INPUT
Biosample NameK562_070715K562_081815K562_070715
Biosample_ENCODE_AccessionENCBS517UIRENCBS175JIHENCBS517UIR
Biosample_ENCODE_Aliasgene-yeo:K562_070715gene-yeo:K562_081815gene-yeo:K562_070715
Cell_LineK562K562K562
Culture_Start_Date2015-07-072015-08-182015-07-07
Culture_End_Date2015-08-042015-09-082015-08-04
Passage555




QC Stats
Experiment QC
567567-control
Self_consistency_hg38
rescue_GRCh38


Replicate QC
Rep_UID567_01567_02567_INPUT
eCT
Usable_reads
Entropy_hg38




Library-Prep Information
Rep_UID567_01567_02567_INPUT
library_size_selection_methodagarose gel extractionagarose gel extractionagarose gel extraction
strand_specificityreversereversereverse
inline_barcode_1A04A03none
inline_barcode_2F05G07none
i5_barcode502502501
i7_barcode706706705




Sequencing Information
Rep_UID567_01567_02567_INPUT
seq_read_typepaired-endedpaired-endedpaired-ended
read_length505050
machine
flowcell
lane




File Information
No files are available for eCLIP experiment (Exp_UID=)567




Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=567)