ENCORE eCLIP:529

RPS24 eCLIP in K562

Experiment Information (Status: Revoked)

	529	529-control
Exp_UID	529	529
RBPARK_Exp_name
ENCODE_ACCESSION	ENCSR967IBA	ENCSR567ZND
ENCODE_alias	gene-yeo:529	gene-yeo:529-control-control
RBP	RPS24	RPS24
Cell_Line	K562	K562
Batch
Exp_type	eCLIP	control
ENCODE_Antibody_ID	ENCAB763EDX	ENCAB763EDX
Antibody	A303-842A	A303-842A
Lot_num	1	1
crosslinking_method	ultraviolet irradiation	ultraviolet irradiation
queried_RNP_size_range	175-300	175-300
Self_consistency_hg38
rescue_GRCh38
Status	Revoked	Revoked
Project	ENCODE3	ENCODE3
ID	278	308

Replicate Information


Rep_UID	529_01	529_02	529_INPUT
Exp UID	529	529	529
Replicate_type	rep1	rep2	control
ENCODE_ACCESSION	ENCLB624ERJ	ENCLB699HOE	ENCLB542ABH
ENCODE_alias	gene-yeo:529_01	gene-yeo:529_02	gene-yeo:529_INPUT
Biosample Name	K562_061215	K562_070715	K562_061215
Biosample_ENCODE_Accession	ENCBS318IMK	ENCBS517UIR	ENCBS318IMK
Biosample_ENCODE_Alias	gene-yeo:K562_061215	gene-yeo:K562_070715	gene-yeo:K562_061215
Cell_Line	K562	K562	K562
Culture_Start_Date	2015-06-12	2015-07-07	2015-06-12
Culture_End_Date	2015-06-30	2015-08-04	2015-06-30
Passage	4	5	4

QC Stats

Experiment QC

	529	529-control
Self_consistency_hg38
rescue_GRCh38

Replicate QC


Rep_UID	529_01	529_02	529_INPUT
eCT
Usable_reads
Entropy_hg38

Library-Prep
Sequencing

Library-Prep Information


Rep_UID	529_01	529_02	529_INPUT
library_size_selection_method	agarose gel extraction	agarose gel extraction	agarose gel extraction
strand_specificity	reverse	reverse	reverse
inline_barcode_1	A01	C01	none
inline_barcode_2	B06	D08fixed	none
i5_barcode	506	506	505
i7_barcode	702	702	701

Sequencing Information


Rep_UID	529_01	529_02	529_INPUT
seq_read_type	paired-ended	paired-ended	paired-ended
read_length	50	50	50
machine
flowcell
lane

File Information No files are available for eCLIP experiment (Exp_UID=)529

Data Submission Information No DCC registered objects are available for eCLIP experiment (Exp_UID=529)