DDX20      eCLIP in HepG2

Experiment Information (Status: Revoked)
390390-control
Exp_UID390390
RBPARK_Exp_name
ENCODE_ACCESSIONENCSR722KBGENCSR240ZFU
ENCODE_aliasgene-yeo:390gene-yeo:390-control-control
RBPDDX20DDX20
Cell_LineHepG2HepG2
Batch
Exp_typeeCLIPcontrol
ENCODE_Antibody_IDENCAB711GMEENCAB711GME
AntibodyA300-651AA300-651A
Lot_num11
crosslinking_methodultraviolet irradiationultraviolet irradiation
queried_RNP_size_range175-300175-300
Self_consistency_hg38
rescue_GRCh38
StatusRevokedRevoked
ProjectENCODE3ENCODE3
ID274304




Replicate Information
Rep_UID390_01390_02390_INPUT
Exp UID390390390
Replicate_typerep1rep2control
ENCODE_ACCESSIONENCLB812WQEENCLB834HCVENCLB275PAJ
ENCODE_aliasgene-yeo:390_01gene-yeo:390_02gene-yeo:390_INPUT
Biosample NameHepG2_061215HepG2_040915HepG2_061215
Biosample_ENCODE_AccessionENCBS308ZPAENCBS362ASGENCBS308ZPA
Biosample_ENCODE_Aliasgene-yeo:HepG2_061215gene-yeo:HepG2_040915gene-yeo:HepG2_061215
Cell_LineHepG2HepG2HepG2
Culture_Start_Date2015-06-122015-04-092015-06-12
Culture_End_Date2015-06-302015-05-082015-06-30
Passage353




QC Stats
Experiment QC
390390-control
Self_consistency_hg38
rescue_GRCh38


Replicate QC
Rep_UID390_01390_02390_INPUT
eCT
Usable_reads
Entropy_hg38




Library-Prep Information
Rep_UID390_01390_02390_INPUT
library_size_selection_methodagarose gel extractionagarose gel extractionagarose gel extraction
strand_specificityreversereversereverse
inline_barcode_1A04A03none
inline_barcode_2F05G07none
i5_barcode506506506
i7_barcode706706705




Sequencing Information
Rep_UID390_01390_02390_INPUT
seq_read_typepaired-endedpaired-endedpaired-ended
read_length505050
machine
flowcell
lane




File Information
No files are available for eCLIP experiment (Exp_UID=)390




Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=390)