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HNRNPA1
eCLIP
in HepG2
Experiment Information
Sequencing Information
File Information
Data Submission
Experiment Information
Replicate Information
QC Stats
Experiment Information (Status:
Released
)
283
283-control
Exp_UID
283
283
RBPARK_Exp_name
ENCODE_ACCESSION
ENCSR769UEW
ENCSR110XNS
ENCODE_alias
gene-yeo:283
gene-yeo:283-control
RBP
HNRNPA1
HNRNPA1
Cell_Line
HepG2
HepG2
Batch
Exp_type
eCLIP
control
ENCODE_Antibody_ID
ENCAB603WLW
ENCAB603WLW
Antibody
sc-32301
sc-32301
Lot_num
12413
12413
crosslinking_method
ultraviolet irradiation
ultraviolet irradiation
queried_RNP_size_range
175-300
175-300
Self_consistency_hg38
rescue_GRCh38
Status
Released
Released
Project
ENCODE3
ENCODE3
ID
37
74
Replicate Information
Rep_UID
283_01
283_02
283_INPUT
Exp UID
283
283
283
Replicate_type
rep1
rep2
control
ENCODE_ACCESSION
ENCLB919ECK
ENCLB352MVW
ENCLB019DSE
ENCODE_alias
gene-yeo:283_01
gene-yeo:283_02
gene-yeo:283_INPUT
Biosample Name
HepG2_082214_batchB
HepG2_032015
HepG2_082214_batchB
Biosample_ENCODE_Accession
ENCBS861HMN
ENCBS548DJV
ENCBS861HMN
Biosample_ENCODE_Alias
gene-yeo:HepG2_082214_batchB
gene-yeo:HepG2_032015
gene-yeo:HepG2_082214_batchB
Cell_Line
HepG2
HepG2
HepG2
Culture_Start_Date
2014-07-23
2015-02-27
2014-07-23
Culture_End_Date
2014-08-22
2015-03-20
2014-08-22
Passage
4
4
4
QC Stats
Experiment QC
283
283-control
Self_consistency_hg38
rescue_GRCh38
Replicate QC
Rep_UID
283_01
283_02
283_INPUT
eCT
Usable_reads
Entropy_hg38
Library-Prep
Sequencing
Library-Prep Information
Rep_UID
283_01
283_02
283_INPUT
library_size_selection_method
agarose gel extraction
agarose gel extraction
agarose gel extraction
strand_specificity
reverse
reverse
reverse
inline_barcode_1
A01
A04
none
inline_barcode_2
B06
F05
none
i5_barcode
503
503
503
i7_barcode
706
706
703
Sequencing Information
Rep_UID
283_01
283_02
283_INPUT
seq_read_type
paired-ended
paired-ended
paired-ended
read_length
50
50
50
machine
flowcell
lane
File Information
GRCh38
file_name
Sample ID
file_format
output_type
assay_type
assembly
genome_annotation
Note
GRCh38/283.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz
283
final_peaks
peaks
eCLIP
GRCh38
hg19
file_name
Sample ID
file_format
output_type
assay_type
assembly
genome_annotation
Note
283.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz
283
final_peaks
peaks
eCLIP
hg19
Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=283)
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