ENCORE eCLIP:280

AUH eCLIP in HepG2

Experiment Information (Status: Revoked)

	280	280-control
Exp_UID	280	280
RBPARK_Exp_name
ENCODE_ACCESSION	ENCSR334QFR	ENCSR821VMD
ENCODE_alias	gene-yeo:280	gene-yeo:280-control-control
RBP	AUH	AUH
Cell_Line	HepG2	HepG2
Batch
Exp_type	eCLIP	control
ENCODE_Antibody_ID	ENCAB000BFE	ENCAB000BFE
Antibody	RN037P	RN037P
Lot_num	1	1
crosslinking_method	ultraviolet irradiation	ultraviolet irradiation
queried_RNP_size_range	175-300	175-300
Self_consistency_hg38
rescue_GRCh38
Status	Revoked	Revoked
Project	ENCODE3	ENCODE3
ID	34	71

Replicate Information


Rep_UID	280_01	280_02	280_INPUT
Exp UID	280	280	280
Replicate_type	rep1	rep2	control
ENCODE_ACCESSION	ENCLB381KLL	ENCLB814JNF	ENCLB828TBY
ENCODE_alias	gene-yeo:280_01	gene-yeo:280_02	gene-yeo:280_INPUT
Biosample Name	HepG2_032015	HepG2_082214_batchB	HepG2_032015
Biosample_ENCODE_Accession	ENCBS548DJV	ENCBS861HMN	ENCBS548DJV
Biosample_ENCODE_Alias	gene-yeo:HepG2_032015	gene-yeo:HepG2_082214_batchB	gene-yeo:HepG2_032015
Cell_Line	HepG2	HepG2	HepG2
Culture_Start_Date	2015-02-27	2014-07-23	2015-02-27
Culture_End_Date	2015-03-20	2014-08-22	2015-03-20
Passage	4	4	4

QC Stats

Experiment QC

	280	280-control
Self_consistency_hg38
rescue_GRCh38

Replicate QC


Rep_UID	280_01	280_02	280_INPUT
eCT
Usable_reads
Entropy_hg38

Library-Prep
Sequencing

Library-Prep Information


Rep_UID	280_01	280_02	280_INPUT
library_size_selection_method	agarose gel extraction	agarose gel extraction	agarose gel extraction
strand_specificity	reverse	reverse	reverse
inline_barcode_1	C01	A03	none
inline_barcode_2	D08fixed	G07	none
i5_barcode	501	501	501
i7_barcode	702	702	701

Sequencing Information


Rep_UID	280_01	280_02	280_INPUT
seq_read_type	paired-ended	paired-ended	paired-ended
read_length	50	50	50
machine
flowcell
lane

File Information No files are available for eCLIP experiment (Exp_UID=)280

Data Submission Information No DCC registered objects are available for eCLIP experiment (Exp_UID=280)