ENCORE eCLIP:246

AUH eCLIP in K562

Experiment Information (Status: Revoked)

	246	246-control
Exp_UID	246	246
RBPARK_Exp_name
ENCODE_ACCESSION	ENCSR541QHS	ENCSR943ZKM
ENCODE_alias	gene-yeo:246	gene-yeo:246-control-control
RBP	AUH	AUH
Cell_Line	K562	K562
Batch
Exp_type	eCLIP	control
ENCODE_Antibody_ID	ENCAB000BFE	ENCAB000BFE
Antibody	RN037P	RN037P
Lot_num	1	1
crosslinking_method	ultraviolet irradiation	ultraviolet irradiation
queried_RNP_size_range	175-300	175-300
Self_consistency_hg38
rescue_GRCh38
Status	Revoked	Revoked
Project	ENCODE3	ENCODE3
ID	23	60

Replicate Information


Rep_UID	246_01	246_02	246_INPUT
Exp UID	246	246	246
Replicate_type	rep1	rep2	control
ENCODE_ACCESSION	ENCLB274RLM	ENCLB441HJU	ENCLB320EKU
ENCODE_alias	gene-yeo:246_01	gene-yeo:246_02	gene-yeo:246_INPUT
Biosample Name	K562_110314A	K562_110314B	K562_110314A
Biosample_ENCODE_Accession	ENCBS126AJR	ENCBS658KIL	ENCBS126AJR
Biosample_ENCODE_Alias	gene-yeo:K562_110314A	gene-yeo:K562_110314B	gene-yeo:K562_110314A
Cell_Line	K562	K562	K562
Culture_Start_Date	2014-10-03	2014-10-06	2014-10-03
Culture_End_Date	2014-11-03	2014-11-03	2014-11-03
Passage	6	5	6

QC Stats

Experiment QC

	246	246-control
Self_consistency_hg38
rescue_GRCh38

Replicate QC


Rep_UID	246_01	246_02	246_INPUT
eCT
Usable_reads
Entropy_hg38

Library-Prep
Sequencing

Library-Prep Information


Rep_UID	246_01	246_02	246_INPUT
library_size_selection_method	agarose gel extraction	agarose gel extraction	agarose gel extraction
strand_specificity	reverse	reverse	reverse
inline_barcode_1	A03	A04	none
inline_barcode_2	G07	F05	none
i5_barcode	504	504	504
i7_barcode	706	706	704

Sequencing Information


Rep_UID	246_01	246_02	246_INPUT
seq_read_type	paired-ended	paired-ended	paired-ended
read_length	50	50	50
machine
flowcell
lane

File Information No files are available for eCLIP experiment (Exp_UID=)246

Data Submission Information No DCC registered objects are available for eCLIP experiment (Exp_UID=246)