LINC00472

General Information

Gene Name       : LINC00472
Gene ID             : ENSG00000233237.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LINC00472)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LINC00472ENSG00000233237.60.000.000.00ENCSR000AEF
HepG2LINC00472ENSG00000233237.60.000.000.00ENCSR985KAT
K562LINC00472ENSG00000233237.60.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LINC00472 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LINC00472 RNA is bound by 1 proteins.  







eCLIP assay for LINC00472 is not avaliable on ENCORE database.





1 proteins are bound to LINC00472 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr67205593972055945-intron-Distal7.9420549.13364K562NSUN2
chr67205593072055939-intron-Distal7.9420549.13364K562NSUN2
chr67205592172055930-intron-Distal7.9420549.13364K562NSUN2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LINC00472 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LINC00472 is not available on ENCORE database.

  • No RBPs affect the gene expression of LINC00472 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for LINC00472 is not available on ENCORE database.






No RBPs affect the gene expression of LINC00472 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for LINC00472 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LINC00472 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LINC00472 is not avaliable on ENCORE database.