AP000487.6

General Information

Gene Name       : AP000487.6
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AP000487.6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AP000487.6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AP000487.6 RNA is bound by 2 proteins.  







eCLIP assay for AP000487.6 is not avaliable on ENCORE database.





2 proteins are bound to AP000487.6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr117020006470200071-intron-Distal6.544016.15474HepG2TROVE2
chr117020006270200071-intron-Distal3.543555.17849HepG2RBM5
chr117020005370200064-intron-Distal6.544016.15474HepG2TROVE2
chr117020005370200062-intron-Distal3.543555.17849HepG2RBM5
chr117020004970200053-intron-Distal3.543555.17849HepG2RBM5
chr117020004970200053-intron-Distal6.544016.15474HepG2TROVE2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AP000487.6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AP000487.6 is not available on ENCORE database.

  • No RBPs affect the gene expression of AP000487.6 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for AP000487.6 is not available on ENCORE database.






No RBPs affect the gene expression of AP000487.6 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for AP000487.6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AP000487.6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AP000487.6 is not avaliable on ENCORE database.