AJ003147.9

General Information

Gene Name       : AJ003147.9
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AJ003147.9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AJ003147.9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AJ003147.9 RNA is bound by 6 proteins.  







eCLIP assay for AJ003147.9 is not avaliable on ENCORE database.





6 proteins are bound to AJ003147.9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1632420523242076+intron-Distal8.10337400.00000K562NSUN2
chr1632420443242047+intron-Distal5.9652728.18828HepG2LIN28B
chr1632420443242074+intron-Distal3.0422146.57950K562PUM2
chr1632420393242043+intron-Distal8.75312400.00000K562NSUN2
chr1632415323241542+intron-Distal3.8261814.64539K562HNRNPM
chr1632420433242052+intron-Distal8.08855400.00000K562NSUN2
chr1632415423241562+intron-Distal3.5315720.20278K562HNRNPM
chr1632420473242073+intron-Distal5.7982329.67960HepG2LIN28B
chr1632415713241582+intron-Distal4.4706714.12716HepG2XPO5
chr1632415623241582+intron-Distal3.5494919.64520K562HNRNPM
chr1632415373241571+intron-Distal4.4820314.12716HepG2XPO5
chr1632420373242039+intron-Distal8.73560400.00000K562NSUN2
chr1632420353242075+intron-Distal5.498305.08739K562XRCC6
chr1632415583241580+intron-Distal6.49709400.00000K562NSUN2
chr1632396603239699+intron-Proximal4.1616113.84871K562LIN28B
chr1632396993239714+intron-Proximal4.7927814.85235K562LIN28B
chr1632396803239688+intron-Proximal8.30049400.00000K562NSUN2
chr1632396923239704+intron-Proximal8.82490400.00000K562NSUN2
chr1632396693239680+intron-Proximal7.16128400.00000K562NSUN2
chr1632397143239745+intron-Proximal3.598513.04123K562LIN28B
chr1632396883239692+intron-Proximal8.77004400.00000K562NSUN2
chr1632397043239720+intron-Proximal8.96152400.00000K562NSUN2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AJ003147.9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AJ003147.9 is not available on ENCORE database.

  • No RBPs affect the gene expression of AJ003147.9 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for AJ003147.9 is not available on ENCORE database.






No RBPs affect the gene expression of AJ003147.9 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for AJ003147.9 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AJ003147.9 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AJ003147.9 is not avaliable on ENCORE database.