CTD-2337A12.1

General Information

Gene Name       : CTD-2337A12.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTD-2337A12.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTD-2337A12.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTD-2337A12.1 RNA is bound by 8 proteins.  







eCLIP assay for CTD-2337A12.1 is not avaliable on ENCORE database.





8 proteins are bound to CTD-2337A12.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr59566941295669489+intron-Distal3.885023.63454HepG2SUGP2
chr59552488395524926+intron-Distal3.905603.29248HepG2SUGP2
chr59579945895799597+intron-Distal4.027764.19039HepG2PTBP1
chr59537013095370207+intron-Distal4.246434.91164HepG2HNRNPL
chr59561449495614552+intron-Distal4.869907.74530HepG2HNRNPL
chr59552328595523350+intron-Distal4.074273.39864HepG2SUGP2
chr59581248295812595+intron-Distal4.957165.88023HepG2HNRNPL
chr59578311895783227+intron-Distal4.9403611.95802HepG2HNRNPL
chr59554274295542816+intron-Distal3.936303.29248HepG2SUGP2
chr59583833695838446+intron-Distal4.614803.74583HepG2PTBP1
chr59595249495952557+intron-Distal3.933163.50031HepG2HNRNPL
chr59543574495435841+intron-Distal3.077194.86332HepG2SUGP2
chr59552708095527188+intron-Distal4.622485.58765HepG2QKI
chr59530974795309805+intron-Distal4.905527.48584HepG2HNRNPL
chr59546182395461890+intron-Distal4.074273.79098HepG2SUGP2
chr59552592995525979+intron-Distal3.315323.84025HepG2SUGP2
chr59578918195789341+intron-Distal3.979953.69311HepG2CSTF2
chr59552501595525109+intron-Distal5.004578.39510HepG2SUGP2
chr59556094495561037+intron-Distal3.755624.59863HepG2PTBP1
chr59552354095523603+intron-Distal4.146474.28663HepG2SUGP2
chr59548592795485977+intron-Distal4.230543.18269HepG2XPO5
chr59550166295501753+intron-Distal4.564234.89163HepG2HNRNPL
chr59530968195309747+intron-Distal3.676536.39350HepG2HNRNPL
chr59552575895525813+intron-Distal3.304793.10640HepG2SUGP2
chr59543613995436226+intron-Distal3.465754.33009HepG2SUGP2
chr59567092195670998+intron-Distal3.846023.54208HepG2SUGP2
chr59552581995525915+intron-Distal4.921127.39957HepG2SUGP2
chr59545271995452840+intron-Distal5.072795.81375HepG2XPO5
chr59552584195525932+intron-Distal4.602245.70028HepG2MATR3
chr59530980595309880+intron-Distal3.495474.45128HepG2HNRNPL
chr59557406395574151+intron-Distal3.780443.89405HepG2PTBP1
chr59529770995297758+intron-Proximal3.905393.19625HepG2NCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTD-2337A12.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTD-2337A12.1 is not available on ENCORE database.

  • No RBPs affect the gene expression of CTD-2337A12.1 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for CTD-2337A12.1 is not available on ENCORE database.






No RBPs affect the gene expression of CTD-2337A12.1 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for CTD-2337A12.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTD-2337A12.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTD-2337A12.1 is not avaliable on ENCORE database.