RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|---|---|---|---|---|---|---|
CPSF3 | Product_ID: A301-090A Lot_ID: 1 Source: Bethyl Labs Target Name: CPSF3-human | ![]() | ![]() | ![]() | |||
CPSF3 | Product_ID: A301-091A Lot_ID: 1 Source: Bethyl Labs Target Name: CPSF3-human | ![]() |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr2 | 9576407 | 9576493 | + | CDS,intron-Proximal | 4.89490 | 16.73160 | K562 | LIN28B |
chr2 | 9606531 | 9606637 | + | intron-Distal | 4.93265 | 12.18390 | K562 | AGGF1 |
chr2 | 9582056 | 9582105 | + | CDS | 4.08034 | 9.39582 | HepG2 | BCLAF1 |
chr2 | 9606000 | 9606080 | + | intron-Distal | 5.20166 | 7.88608 | K562 | AGGF1 |
chr2 | 9588400 | 9588469 | + | CDS | 3.96412 | 7.65975 | HepG2 | BCLAF1 |
chr2 | 9565879 | 9566065 | + | intron-Distal | 4.82038 | 7.07589 | HepG2 | HNRNPL |
chr2 | 9576339 | 9576399 | + | CDS,intron-Proximal | 3.43467 | 6.50801 | HepG2 | BCLAF1 |
chr2 | 9581763 | 9581826 | + | intron-Distal | 4.71951 | 6.21813 | K562 | TIA1 |
chr2 | 9581923 | 9581977 | + | CDS,intron-Proximal | 3.78689 | 6.17334 | HepG2 | U2AF2 |
chr2 | 9583644 | 9583669 | + | CDS | 3.99859 | 5.79432 | HepG2 | BCLAF1 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
CPSF3 | ENSG00000119203.9 | 1426.98280 | 3233.58970 | -1.18020 | 28.04360 | 26.37750 | K562 | AQR | |
CPSF3 | ENSG00000119203.9 | 981.97840 | 1713.20690 | -0.80290 | 20.81750 | 19.23560 | HepG2 | SRSF7 | |
CPSF3 | ENSG00000119203.9 | 785.35930 | 1386.43100 | -0.82000 | 19.60060 | 18.22170 | HepG2 | PCBP1 | |
CPSF3 | ENSG00000119203.9 | 1945.24660 | 3521.04880 | -0.85610 | 18.98020 | 16.92310 | K562 | GRSF1 | |
CPSF3 | ENSG00000119203.9 | 739.66860 | 1367.29680 | -0.88640 | 17.42370 | 16.36510 | HepG2 | TIAL1 | |
CPSF3 | ENSG00000119203.9 | 1905.22050 | 2703.62040 | -0.50490 | 16.43120 | 14.81980 | K562 | NSUN2 | |
CPSF3 | ENSG00000119203.9 | 1613.10560 | 2433.27520 | -0.59310 | 15.11430 | 13.41300 | K562 | MTPAP | |
CPSF3 | ENSG00000119203.9 | 1078.96770 | 1878.38100 | -0.79980 | 12.51150 | 11.24500 | HepG2 | RPLP0 | |
CPSF3 | ENSG00000119203.9 | 650.99920 | 1210.77580 | -0.89520 | 12.18720 | 10.86170 | HepG2 | CPSF6 | |
CPSF3 | ENSG00000119203.9 | 1418.04700 | 2020.28830 | -0.51070 | 11.83820 | 10.56040 | HepG2 | SLBP | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | CPSF3 | ENSG00000119203.9 | chr2 | + | 9570880 | 9571009 | 9570051 | 9570149 | 9572639 | 9572817 | -0.08100 | 0.00001 | 0.00088 | excluded | K562 | TARDBP | |||
SE | CPSF3 | ENSG00000119203.9 | chr2 | + | 9570880 | 9571009 | 9570051 | 9570149 | 9572639 | 9572817 | -0.08700 | 0.00011 | 0.00350 | excluded | K562 | U2AF1 | |||
SE | CPSF3 | ENSG00000119203.9 | chr2 | + | 9581663 | 9581730 | 9580619 | 9580795 | 9581946 | 9582105 | 0.09400 | 0.00024 | 0.09834 | included | HepG2 | GRSF1 | |||
SE | CPSF3 | ENSG00000119203.9 | chr2 | + | 9570880 | 9571009 | 9570051 | 9570149 | 9572639 | 9572817 | -0.07600 | 0.00029 | 0.00761 | excluded | K562 | SF3B4 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".