SEC63 RNA-Seq in K562

General Information

Experiment Information (Status: NotSatisfied)

	BGKcLV33-35	BGKcLV33-35	BGKcLV33-36	BGKcLV33-36
idx	1137	1222	1138	1223
TRCN#_or_BGC#	BGC#0000853	BGC#0000848	BGC#0000853	BGC#0000848
shRNA_or_gRNA_sequence	GATCACGATGAGCCCCACGA	GCCGAGAGAAAACCTAACGG	GATCACGATGAGCCCCACGA	GCCGAGAGAAAACCTAACGG
PAM	AGG	TGG	AGG	TGG
Name	SEC63_94	SEC23IP_96	SEC63_94	SEC23IP_96
Sample_ID	BGKcLV33-35	BGKcLV33-35	BGKcLV33-36	BGKcLV33-36
transduction_Date	12/7/21	2/22/22	12/7/21	2/22/22
days	D6	D6	D6	D6
RBP_name	SEC63	SEC23IP	SEC63	SEC23IP
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc	374	2065	482	1800
WB_result	74.7	no band	72.1
Ave_WB	73.4
WB_DONE_date	1/24/22	3/14/22, 3/21/22,3/2		Licor, jess
MW	88kd	111kd
IP
antibody_Cat#	A305-084A	A300-592A	LOT #1	LOT #1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM	0	14.4	0	0
Rep2_TPM	0	17.3	0	0
Action
Library_start_date
repeat_library
Note
ID	5277	5364	5278	5365

Western Blot Western Blot info was not avaliable

Experiment Status

	BGKcLV33-35	BGKcLV33-35	BGKcLV33-36	BGKcLV33-36
Sample_ID	BGKcLV33-35	BGKcLV33-35	BGKcLV33-36	BGKcLV33-36
Sample Name
Sample Name
RBP	SEC63	SEC23IP	SEC63	SEC23IP
Cell_Line	K562	K562	K562	K562
Exp UID
Status	NotSatisfied	NotSatisfied	NotSatisfied	NotSatisfied
Status_date	2022-03-30	2022-03-30	2022-03-30	2022-03-30
Project	ENCODE4	ENCODE4	ENCODE4	ENCODE4
Note
ID	10721	10777	10722	10778

Library-Prep Information Library info was not avaliable

Sequencing Information Sequencing info was not avaliable

Data Submission Information DCC submission information was not avaliable

File Information Files of the experiment was not avaliable in the database