FAM209A

General Information

Gene Name : FAM209A
Gene ID : ENSG00000124103.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM209A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FAM209A	ENSG00000124103.8	0.00	0.35	0.17	ENCSR000AEF
HepG2	FAM209A	ENSG00000124103.8	0.14	0.25	0.20	ENCSR985KAT
K562	FAM209A	ENSG00000124103.8	0.08	0.03	0.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM209A is not avaliable on ENCORE database.

Proteins bound to RNA

FAM209A RNA is bound by 9 proteins.

CanvasJS.com

eCLIP assay for FAM209A is not avaliable on ENCORE database.

9 proteins are bound to FAM209A RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	55093414	55093471	+	3'-UTR,intron-Distal,intron-Proximal	5.01099	25.79661	HepG2	SUB1
chr20	55093675	55093725	+	3'-UTR,intron-Distal	5.25476	17.53659	K562	PABPC4
chr20	55093826	55093902	+	3'-UTR,intron-Distal	4.79552	16.83921	K562	PABPC4
chr20	55093471	55093527	+	3'-UTR,intron-Distal	4.41725	15.27671	HepG2	SUB1
chr20	55093747	55093839	+	3'-UTR,intron-Distal	5.07257	14.08080	K562	LIN28B
chr20	55093614	55093631	+	3'-UTR,intron-Distal	3.78634	14.00943	K562	YBX3
chr20	55093631	55093646	+	3'-UTR,intron-Distal	3.81069	13.60526	K562	YBX3
chr20	55093348	55093413	+	3'-UTR,intron-Proximal	4.87947	12.61077	K562	PABPC4
chr20	55093839	55093885	+	3'-UTR,intron-Distal	5.67267	9.64995	K562	LIN28B
chr20	55093528	55093598	+	3'-UTR,intron-Distal	3.59657	9.09662	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 23 entries

eCLIP assay for FAM209A is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for FAM209A is not available on ENCORE database.
5 RBPs can affect the levels of FAM209A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM209A is not available on ENCORE database.

5 RBPs can affect the gene expression of FAM209A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM209A	ENSG00000124103.8	84.91330	2.50610	5.08240	18.40220	17.05510	K562	AQR
FAM209A	ENSG00000124103.8	38.73550	1.92100	4.33360	7.21140	5.89020	K562	PUF60
FAM209A	ENSG00000124103.8	17.90770	2.13300	3.06950	2.85640	2.25120	K562	HNRNPC
FAM209A	ENSG00000124103.8	11.71720	1.68750	2.79560	1.97820	1.53300	HepG2	SRFBP1
FAM209A	ENSG00000124103.8	10.45500	0.82340	3.66630	1.96490	1.42570	HepG2	U2AF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM209A

General Information

Functions

Localization

Domains (AlphaFold: FAM209A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM209A is not avaliable on ENCORE database.

9 proteins are bound to FAM209A RNA:

eCLIP assay for FAM209A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM209A is not available on ENCORE database.

5 RBPs can affect the gene expression of FAM209A :

The Knockdown/knockout RNA-Seq assay for FAM209A is not available on ENCORE database.

No RBPs affect the alternative splcing events of FAM209A on ENCORE database.

The Knockdown/knockout RNA-Seq assay for FAM209A is not avaliable on ENCORE database.