AC084082.3

General Information

Gene Name : AC084082.3
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AC084082.3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AC084082.3 is not avaliable on ENCORE database.

Proteins bound to RNA

AC084082.3 RNA is bound by 3 proteins.

CanvasJS.com

eCLIP assay for AC084082.3 is not avaliable on ENCORE database.

3 proteins are bound to AC084082.3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	67025637	67025707	+	intron-Distal	3.68349	18.97510	K562	SSB
chr8	67025593	67025637	+	intron-Distal	5.10348	15.65606	K562	SSB
chr8	67025594	67025631	+	intron-Distal	4.26616	9.00103	HepG2	SSB
chr8	67026498	67026529	+	intron-Distal	3.36072	8.84070	K562	LIN28B
chr8	67026474	67026498	+	intron-Distal	3.17518	7.69052	K562	LIN28B
chr8	67025631	67025638	+	intron-Distal	3.63083	7.48413	HepG2	SSB
chr8	67026452	67026474	+	intron-Distal	4.17518	4.72426	K562	LIN28B
chr8	67026278	67026329	+	intron-Distal	4.81550	4.22343	HepG2	XPO5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 8 of 8 entries

eCLIP assay for AC084082.3 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for AC084082.3 is not available on ENCORE database.
9 RBPs can affect the levels of AC084082.3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AC084082.3 is not available on ENCORE database.

9 RBPs can affect the gene expression of AC084082.3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AC084082.3	ENSG00000253190.2	17.02420	0.40600	5.39000	4.73780	4.10260	HepG2	SSB
AC084082.3	ENSG00000253190.2	19.05830	0.51650	5.20540	4.27590	3.00320	HepG2	SRSF3
AC084082.3	ENSG00000253190.2	10.44080	0.00000	99999.99990	3.20130	2.66970	HepG2	TIAL1
AC084082.3	ENSG00000253190.2	10.46210	0.00000	99999.99990	2.93830	2.27860	HepG2	EIF4A3
AC084082.3	ENSG00000253190.2	7.89200	0.00000	99999.99990	2.42910	1.85810	HepG2	HNRNPU
AC084082.3	ENSG00000253190.2	8.42600	0.00000	99999.99990	2.26000	1.66490	HepG2	MAGOH
AC084082.3	ENSG00000253190.2	12.79460	1.63290	2.96990	2.27490	1.66280	HepG2	CKAP4
AC084082.3	ENSG00000253190.2	7.29780	0.00000	99999.99990	1.98100	1.42280	HepG2	HNRNPA1
AC084082.3	ENSG00000253190.2	8.34860	0.41460	4.33160	1.82990	1.38580	HepG2	RBM22
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AC084082.3

General Information

Functions

Localization

Domains (AlphaFold: AC084082.3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AC084082.3 is not avaliable on ENCORE database.

3 proteins are bound to AC084082.3 RNA:

eCLIP assay for AC084082.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AC084082.3 is not available on ENCORE database.

9 RBPs can affect the gene expression of AC084082.3 :

The Knockdown/knockout RNA-Seq assay for AC084082.3 is not available on ENCORE database.

No RBPs affect the alternative splcing events of AC084082.3 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for AC084082.3 is not avaliable on ENCORE database.