ZNF706

General Information

Gene Name : ZNF706
Gene ID : ENSG00000120963.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF706)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF706	ENSG00000120963.11	86.96	70.82	78.89	ENCSR000AEF
HepG2	ZNF706	ENSG00000120963.11	52.00	71.72	61.86	ENCSR985KAT
K562	ZNF706	ENSG00000120963.11	90.81	92.96	91.88	ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	Target label	Biosample	Status	Method	Note
knockdown followed by RNA-seq	ZNF706-BGRSLV03-RS293	ZNF706	Ribo-STAMP-293T	Released	shRNA	KD% = ,
knockdown followed by RNA-seq	ZNF706-BGRSDLV04-RSD293	ZNF706	Ribo-STAMP-293T	Released	shRNA	KD% =
knockdown followed by RNA-seq	ZNF706-BGRSDLV04-RSD293	ZNF706	Ribo-STAMP-293T	Released	shRNA	KD% = ,

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
ZNF706	Ribo-STAMP-293T	shRNA	ZNF706-BGRSLV03-67,ZNF706-BGRSLV03-68	NT-BGRSLV03-1,NT-BGRSLV03-2	,	Released	ENCORE2
ZNF706	Ribo-STAMP-293T	shRNA	BGRSDLV04-77,BGRSDLV04-78	BGRSDLV04-1,BGRSDLV04-2		Released	ENCORE2
ZNF706	Ribo-STAMP-293T	shRNA	ZNF706-BGRSDLV04-79dox,ZNF706-BGRSDLV04-80dox	NT-BGRSDLV04-3dox,NT-BGRSDLV04-4dox	,	Released	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF706 is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF706 RNA is bound by 34 proteins.

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eCLIP assay for ZNF706 is not avaliable on ENCORE database.

34 proteins are bound to ZNF706 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	102217426	102217580	-	5'-UTR,intron-Distal,intron-Proximal	3.69571	59.67465	K562	DROSHA
chr8	102217535	102217609	-	5'-UTR,intron-Distal,intron-Proximal	4.21841	45.61751	K562	AQR
chr8	102217441	102217513	-	5'-UTR,intron-Distal	3.91500	41.80181	K562	AQR
chr8	102211292	102211350	-	3'-UTR,intron-Distal,intron-Proximal	4.52622	40.61163	K562	PUM2
chr8	102217417	102217586	-	5'-UTR,intron-Distal,intron-Proximal	3.93131	40.23414	K562	CSTF2T
chr8	102217182	102217273	-	5'-UTR,intron-Distal	4.23551	35.56076	K562	CSTF2T
chr8	102217454	102217523	-	5'-UTR,intron-Distal,intron-Proximal	4.37843	35.21960	K562	GEMIN5
chr8	102217609	102217664	-	5'-UTR,intron-Distal,intron-Proximal	5.63481	28.17552	K562	AQR
chr8	102214633	102214694	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.76469	26.55250	K562	AQR
chr8	102211229	102211292	-	3'-UTR,intron-Distal,intron-Proximal	4.69012	25.29520	K562	PUM2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 79 entries

eCLIP assay for ZNF706 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF706 is not available on ENCORE database.
96 RBPs can affect the levels of ZNF706.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZNF706 is not available on ENCORE database.

96 RBPs can affect the gene expression of ZNF706 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF706	ENSG00000120963.7	1374.06840	410.92230	1.74140	43.25340	40.91740	HepG2	HNRNPC
ZNF706	ENSG00000120963.7	1653.04200	3299.64000	-0.99720	40.84040	38.61960	K562	DDX47
ZNF706	ENSG00000120963.7	1997.15870	972.51540	1.03810	38.37390	37.06990	HepG2	SRFBP1
ZNF706	ENSG00000120963.7	1177.06270	642.39500	0.87360	21.48390	20.14670	HepG2	ACO1
ZNF706	ENSG00000120963.7	1598.62250	472.69910	1.75770	21.10490	19.33060	HepG2	RAVER1
ZNF706	ENSG00000120963.7	2760.97560	1481.11590	0.89840	19.99880	18.47470	K562	HNRNPC
ZNF706	ENSG00000120963.7	880.02840	1473.18150	-0.74330	14.18150	12.32550	K562	EIF3G
ZNF706	ENSG00000120963.7	4840.35530	2854.63450	0.76170	13.37260	12.22350	K562	PUS1
ZNF706	ENSG00000120963.7	1246.44540	824.63600	0.59590	12.76940	11.69320	HepG2	PUM1
ZNF706	ENSG00000120963.7	1040.72540	1826.95990	-0.81190	13.22800	11.37570	K562	EIF4A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF706 is not available on ENCORE database.

21 RBPs can affect the splicing of ZNF706 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	-0.31400	0.00000	excluded	K562	SRSF1
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213834	102213971	102217662	102217960	0.07200	0.00004	included	K562	WDR3
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	0.10600	0.00000	included	K562	FMR1
SE	ZNF706	ENSG00000120963.7	chr8	-	102212217	102212325	102211422	102211467	102213834	102213971	-0.09000	0.00000	excluded	HepG2	U2AF2
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213834	102213971	102217662	102217960	0.09000	0.00007	included	K562	AQR
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	0.46100	0.00000	included	K562	U2AF1
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	0.10700	0.00010	included	HepG2	CDC40
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	-0.31800	0.00004	excluded	K562	RBM22
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	-0.29700	0.00001	excluded	K562	TARDBP
SE	ZNF706	ENSG00000120963.7	chr8	-	102214560	102214675	102213842	102213971	102217662	102217960	0.56900	0.00003	included	HepG2	HNRNPC

Showing 1 to 10 of 23 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF706

General Information

Functions

Localization

Domains (AlphaFold: ZNF706)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF706 is not avaliable on ENCORE database.

34 proteins are bound to ZNF706 RNA:

eCLIP assay for ZNF706 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF706 is not available on ENCORE database.

96 RBPs can affect the gene expression of ZNF706 :

The Knockdown/knockout RNA-Seq assay for ZNF706 is not available on ENCORE database.

21 RBPs can affect the splicing of ZNF706 :

The Knockdown/knockout RNA-Seq assay for ZNF706 is not avaliable on ENCORE database.