ENCORE RBNS:SRSF10

Experiment Information (Status: Released)


RBP	SRSF10
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	37

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
SRSF10-mockPD	CN	20-20	0	SRSF10_0.fastq.gz
SRSF10-1300	RBNS	20-20	1300	SRSF10_1300.fastq.gz
SRSF10-20	RBNS	20-20	20	SRSF10_20.fastq.gz
SRSF10-320	RBNS	20-20	320	SRSF10_320.fastq.gz
SRSF10-5	RBNS	20-20	5	SRSF10_5.fastq.gz
SRSF10-80	RBNS	20-20	80	SRSF10_80.fastq.gz
SRSF10-input	CN	20-20	0	SRSF10_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	ID
chris-burge:SRSF10	ENCSR744POX	experiment	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-12	ENCODE3	8114
chris-burge:SRSF10-input-cntl	ENCSR187FJB	experiment	RNA Bind-n-Seq	SRSF10	XRCC6-BGKcLV15-62	Yes	Released	2022-07-12	ENCODE3	8115
chris-burge:SRSF10-mockPD-cntl	ENCSR416ZAE	experiment	RNA Bind-n-Seq	SRSF10	RPL28-BGKcLV15-54	Yes	Released	2022-07-12	ENCODE3	8116
chris-burge:lib-SRSF10-1	ENCLB152XJM	library	RNA Bind-n-Seq	SRSF10	THOC1-BGKcLV15-60	Yes	Released	2022-07-12	ENCODE3	8536
chris-burge:lib-SRSF10-2	ENCLB148SRS	library	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-56	Yes	Released	2022-07-12	ENCODE3	8537
chris-burge:lib-SRSF10-3	ENCLB669NDQ	library	RNA Bind-n-Seq	SRSF10	XRCC6-BGKcLV15-61	Yes	Released	2022-07-12	ENCODE3	8538
chris-burge:lib-SRSF10-4	ENCLB879IWC	library	RNA Bind-n-Seq	SRSF10	THOC1-BGKcLV15-59	Yes	Released	2022-07-12	ENCODE3	8539
chris-burge:lib-SRSF10-5	ENCLB726ZGW	library	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-12	ENCODE3	8540
chris-burge:lib-SRSF10-input-cntl	ENCLB033WQU	library	RNA Bind-n-Seq	SRSF10	XRCC6-BGKcLV15-62	Yes	Released	2022-07-12	ENCODE3	8541
chris-burge:lib-SRSF10-mockPD-cntl	ENCLB492TQC	library	RNA Bind-n-Seq	SRSF10	RPL28-BGKcLV15-54	Yes	Released	2022-07-12	ENCODE3	8542
chris-burge:SRSF10_0.fastq.gz	ENCFF208GAK	file_fastq	RNA Bind-n-Seq	SRSF10	RPL28-BGKcLV15-54	Yes	Released	2022-07-14	ENCODE3	8937
chris-burge:SRSF10_1300.fastq.gz	ENCFF457XQS	file_fastq	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	8938
chris-burge:SRSF10_20.fastq.gz	ENCFF593KNI	file_fastq	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-56	Yes	Released	2022-07-14	ENCODE3	8939
chris-burge:SRSF10_320.fastq.gz	ENCFF908JKG	file_fastq	RNA Bind-n-Seq	SRSF10	THOC1-BGKcLV15-59	Yes	Released	2022-07-14	ENCODE3	8940
chris-burge:SRSF10_5.fastq.gz	ENCFF272IIN	file_fastq	RNA Bind-n-Seq	SRSF10	THOC1-BGKcLV15-60	Yes	Released	2022-07-14	ENCODE3	8941
chris-burge:SRSF10_80.fastq.gz	ENCFF386EWB	file_fastq	RNA Bind-n-Seq	SRSF10	XRCC6-BGKcLV15-61	Yes	Released	2022-07-14	ENCODE3	8942
chris-burge:SRSF10_input.fastq.gz	ENCFF532AHD	file_fastq	RNA Bind-n-Seq	SRSF10	XRCC6-BGKcLV15-62	Yes	Released	2022-07-14	ENCODE3	8943
chris-burge:SRSF10_enrichment_R.4mers.txt	ENCFF057FSE	file_enrichment	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	9461
chris-burge:SRSF10_enrichment_R.5mers.txt	ENCFF855MSY	file_enrichment	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	9462
chris-burge:SRSF10_enrichment_R.6mers.txt	ENCFF896LEJ	file_enrichment	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	9463
chris-burge:SRSF10_est_binding_frac.4mers.txt	ENCFF820MRK	file_library-fraction	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	9464
chris-burge:SRSF10_est_binding_frac.5mers.txt	ENCFF590LJM	file_library-fraction	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	9465
chris-burge:SRSF10_est_binding_frac.6mers.txt	ENCFF645LFQ	file_library-fraction	RNA Bind-n-Seq	SRSF10	SMAD2-BGKcLV15-55	Yes	Released	2022-07-14	ENCODE3	9466

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project
SRSF10.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF10_0.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF10_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF10_0.fastq.gz,SRSF10_input.fastq.gz	ENCODE3
SRSF10_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF10_0.fastq.gz,SRSF10_input.fastq.gz	ENCODE3
SRSF10_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF10_0.fastq.gz,SRSF10_input.fastq.gz	ENCODE3
SRSF10_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF10_0.fastq.gz,SRSF10_input.fastq.gz	ENCODE3
SRSF10_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		SRSF10_0.fastq.gz,SRSF10_input.fastq.gz	ENCODE3
SRSF10_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
SRSF10_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF10_0.fastq.gz,SRSF10_1300.fastq.gz,SRSF10_20.fastq.gz,SRSF10_320.fastq.gz,SRSF10_5.fastq.gz,SRSF10_80.fastq.gz,SRSF10_input.fastq.gz		ENCODE3
SRSF10_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF10_0.fastq.gz,SRSF10_1300.fastq.gz,SRSF10_20.fastq.gz,SRSF10_320.fastq.gz,SRSF10_5.fastq.gz,SRSF10_80.fastq.gz,SRSF10_input.fastq.gz		ENCODE3
SRSF10_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF10_0.fastq.gz,SRSF10_1300.fastq.gz,SRSF10_20.fastq.gz,SRSF10_320.fastq.gz,SRSF10_5.fastq.gz,SRSF10_80.fastq.gz,SRSF10_input.fastq.gz		ENCODE3
SRSF10_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF10_0.fastq.gz,SRSF10_1300.fastq.gz,SRSF10_20.fastq.gz,SRSF10_320.fastq.gz,SRSF10_5.fastq.gz,SRSF10_80.fastq.gz,SRSF10_input.fastq.gz		ENCODE3
SRSF10_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF10_0.fastq.gz,SRSF10_1300.fastq.gz,SRSF10_20.fastq.gz,SRSF10_320.fastq.gz,SRSF10_5.fastq.gz,SRSF10_80.fastq.gz,SRSF10_input.fastq.gz		ENCODE3
SRSF10_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	SRSF10_0.fastq.gz,SRSF10_1300.fastq.gz,SRSF10_20.fastq.gz,SRSF10_320.fastq.gz,SRSF10_5.fastq.gz,SRSF10_80.fastq.gz,SRSF10_input.fastq.gz		ENCODE3