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NONO
eCLIP
in K562
Experiment Information
Sequencing Information
File Information
Data Submission
Experiment Information
Replicate Information
QC Stats
Experiment Information (Status:
Released
)
405
405-control
Exp_UID
405
405
RBPARK_Exp_name
ENCODE_ACCESSION
ENCSR861PAR
ENCSR487EUV
ENCODE_alias
gene-yeo:405
gene-yeo:405-control
RBP
NONO
NONO
Cell_Line
K562
K562
Batch
Exp_type
eCLIP
control
ENCODE_Antibody_ID
ENCAB467FVY
ENCAB467FVY
Antibody
A300-587A
A300-587A
Lot_num
1
1
crosslinking_method
ultraviolet irradiation
ultraviolet irradiation
queried_RNP_size_range
175-300
175-300
Self_consistency_hg38
rescue_GRCh38
Status
Released
Released
Project
ENCODE3
ENCODE3
ID
153
168
Replicate Information
Rep_UID
405_01
405_02
405_INPUT
Exp UID
405
405
405
Replicate_type
rep1
rep2
control
ENCODE_ACCESSION
ENCLB635FWC
ENCLB674FXL
ENCLB742PBR
ENCODE_alias
gene-yeo:405_01
gene-yeo:405_02
gene-yeo:405_INPUT
Biosample Name
K562_040915
K562_051215
K562_040915
Biosample_ENCODE_Accession
ENCBS931MQO
ENCBS489LOC
ENCBS931MQO
Biosample_ENCODE_Alias
gene-yeo:K562_040915
gene-yeo:K562_051215
gene-yeo:K562_040915
Cell_Line
K562
K562
K562
Culture_Start_Date
2015-04-09
2015-05-12
2015-04-09
Culture_End_Date
2015-05-08
2015-06-11
2015-05-08
Passage
5
4
5
QC Stats
Experiment QC
405
405-control
Self_consistency_hg38
rescue_GRCh38
Replicate QC
Rep_UID
405_01
405_02
405_INPUT
eCT
Usable_reads
Entropy_hg38
Library-Prep
Sequencing
Library-Prep Information
Rep_UID
405_01
405_02
405_INPUT
library_size_selection_method
agarose gel extraction
agarose gel extraction
agarose gel extraction
strand_specificity
reverse
reverse
reverse
inline_barcode_1
A04
A03
none
inline_barcode_2
F05
G07
none
i5_barcode
501
501
501
i7_barcode
706
706
705
Sequencing Information
Rep_UID
405_01
405_02
405_INPUT
seq_read_type
paired-ended
paired-ended
paired-ended
read_length
50
50
50
machine
flowcell
lane
File Information
GRCh38
file_name
Sample ID
file_format
output_type
assay_type
assembly
genome_annotation
Note
GRCh38/405.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz
405
final_peaks
peaks
eCLIP
GRCh38
hg19
file_name
Sample ID
file_format
output_type
assay_type
assembly
genome_annotation
Note
405.01v02.IDR.out.0102merged.bed.blacklist_removed.bed.narrowPeak.encode.bed.gz
405
final_peaks
peaks
eCLIP
hg19
Data Submission Information
No DCC registered objects are available for eCLIP experiment (Exp_UID=405)
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