RP5-1000K24.2

General Information

Gene Name : RP5-1000K24.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP5-1000K24.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP5-1000K24.2 RNA is bound by 1 proteins.

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

1 proteins are bound to RP5-1000K24.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	77193331	77193472	+	intron-Distal	3.50157	6.43604	K562	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP5-1000K24.2 is not available on ENCORE database.
43 RBPs can affect the levels of RP5-1000K24.2.

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

43 RBPs can affect the gene expression of RP5-1000K24.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP5-1000K24.2	ENSG00000248503.2	812.25390	132.64480	2.61430	72.23140	69.38000	K562	AGGF1
RP5-1000K24.2	ENSG00000248503.2	328.33520	145.81590	1.17090	2.35250	1.45830	K562	AKAP8
RP5-1000K24.2	ENSG00000248503.2	703.95070	138.03750	2.35030	10.58720	9.20360	K562	AKAP8L
RP5-1000K24.2	ENSG00000248503.2	43.21150	88.17370	-1.02890	2.91000	1.63720	K562	APOBEC3C
RP5-1000K24.2	ENSG00000248503.2	313.57770	144.86220	1.11400	2.08810	1.30380	K562	ATP5C1
RP5-1000K24.2	ENSG00000248503.2	28.14360	81.46110	-1.53330	5.32540	4.46290	K562	DDX47
RP5-1000K24.2	ENSG00000248503.2	37.25340	112.38860	-1.59310	3.83440	2.87200	K562	EIF4A3
RP5-1000K24.2	ENSG00000248503.2	19.80230	116.88180	-2.56130	7.75390	6.80880	K562	FXR1
RP5-1000K24.2	ENSG00000248503.2	191.54680	96.13690	0.99440	5.68230	3.52920	K562	G3BP1
RP5-1000K24.2	ENSG00000248503.2	425.28730	102.09730	2.05840	14.72020	11.24060	K562	HNRNPA2B1
RP5-1000K24.2	ENSG00000248503.2	20.33050	75.31020	-1.88920	5.96020	5.11740	K562	HNRNPC
RP5-1000K24.2	ENSG00000248503.2	48.49120	100.41590	-1.05020	3.25880	1.90540	K562	HNRNPK
RP5-1000K24.2	ENSG00000248503.2	466.02740	146.44110	1.67000	4.39660	3.32500	K562	KIF1C
RP5-1000K24.2	ENSG00000248503.2	33.41090	105.67750	-1.66130	8.17610	6.69470	K562	MAGOH
RP5-1000K24.2	ENSG00000248503.2	520.20750	114.99740	2.17740	5.38870	4.01790	K562	NAA15
RP5-1000K24.2	ENSG00000248503.2	228.97580	118.51040	0.95010	5.22130	2.74250	K562	PABPC4
RP5-1000K24.2	ENSG00000248503.2	468.18150	89.27600	2.39060	8.20200	6.17460	K562	PABPN1
RP5-1000K24.2	ENSG00000248503.2	46.62960	94.01860	-1.01170	2.92140	1.91780	K562	PCBP2
RP5-1000K24.2	ENSG00000248503.2	23.12820	69.37310	-1.58470	4.44870	3.39540	K562	PCBP3
RP5-1000K24.2	ENSG00000248503.2	20.99000	53.21140	-1.34200	2.95830	2.12920	K562	POLR2G
RP5-1000K24.2	ENSG00000248503.2	293.86020	106.10960	1.46950	6.97890	4.28320	K562	PPP1R8
RP5-1000K24.2	ENSG00000248503.2	7.10600	38.40870	-2.43430	4.35520	3.41500	K562	PRPF8
RP5-1000K24.2	ENSG00000248503.2	29.53280	109.03110	-1.88430	8.33380	6.91210	K562	PUF60
RP5-1000K24.2	ENSG00000248503.2	72.81380	116.02650	-0.67220	2.31630	1.34750	K562	PUM1
RP5-1000K24.2	ENSG00000248503.2	72.17250	113.62700	-0.65480	2.15940	1.31000	K562	PUM2
RP5-1000K24.2	ENSG00000248503.2	992.28350	136.79100	2.85870	6.35040	5.56640	K562	PUS1
RP5-1000K24.2	ENSG00000248503.2	700.68270	133.36870	2.39320	41.39310	38.98810	K562	RBM15
RP5-1000K24.2	ENSG00000248503.2	178.11280	106.34120	0.74400	2.95480	1.57250	K562	RBM25
RP5-1000K24.2	ENSG00000248503.2	337.61660	109.82980	1.62000	3.20800	1.52180	K562	RBM39
RP5-1000K24.2	ENSG00000248503.2	32.69400	103.58670	-1.66370	7.52230	5.64110	K562	NELFE
RP5-1000K24.2	ENSG00000248503.2	7.13220	39.12030	-2.45550	4.70020	3.63320	K562	RPS19
RP5-1000K24.2	ENSG00000248503.2	59.31470	138.93270	-1.22790	4.53790	3.21700	K562	RPS3
RP5-1000K24.2	ENSG00000248503.2	190.33210	81.62780	1.22130	3.83110	2.34900	K562	SF1
RP5-1000K24.2	ENSG00000248503.2	247.22580	93.77160	1.39850	5.92970	3.90670	K562	SNRNP200
RP5-1000K24.2	ENSG00000248503.2	43.38100	100.66140	-1.21440	4.39660	3.50990	K562	SRSF1
RP5-1000K24.2	ENSG00000248503.2	72.20350	33.41880	1.11130	2.69160	1.43610	K562	SSB
RP5-1000K24.2	ENSG00000248503.2	305.54460	114.98990	1.40980	5.29190	2.50450	K562	SUGP2
RP5-1000K24.2	ENSG00000248503.2	372.70080	112.14690	1.73250	3.65400	1.92680	K562	SUPT6H
RP5-1000K24.2	ENSG00000248503.2	25.98720	53.37260	-1.03830	2.12460	1.40380	K562	SYNCRIP
RP5-1000K24.2	ENSG00000248503.2	29.70780	101.86510	-1.77770	7.94850	6.67180	K562	TARDBP
RP5-1000K24.2	ENSG00000248503.2	203.64790	112.30890	0.85850	4.27610	3.28190	K562	U2AF2
RP5-1000K24.2	ENSG00000248503.2	38.46910	68.51460	-0.83270	2.06650	1.32760	K562	WDR43
RP5-1000K24.2	ENSG00000248503.2	296.26810	110.33460	1.42490	3.45290	1.62100	K562	YTHDC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

9 RBPs can affect the splicing of RP5-1000K24.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	0.20600	0.00230	0.04072	included	K562	SF3B4
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.16100	0.00000	0.00008	excluded	K562	AKAP8L
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	0.37900	0.00006	0.00421	included	K562	FXR1
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.17000	0.00000	0.00000	excluded	K562	PUS1
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178549	77166237	77166332	77218119	77220387	-0.20300	0.00016	0.03500	excluded	K562	LARP4
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.13400	0.00065	0.02471	excluded	K562	UTP18
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.15400	0.00000	0.00024	excluded	K562	RBM15
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	-0.18400	0.00000	0.00000	excluded	K562	AGGF1
SE	RP5-1000K24.2	ENSG00000248503.2	chrX	+	77178495	77178539	77166237	77166332	77218119	77220387	0.45300	0.00038	0.07409	included	K562	SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP5-1000K24.2

General Information

Functions

Localization

Domains (AlphaFold: RP5-1000K24.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

1 proteins are bound to RP5-1000K24.2 RNA:

eCLIP assay for RP5-1000K24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

43 RBPs can affect the gene expression of RP5-1000K24.2 :

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not available on ENCORE database.

9 RBPs can affect the splicing of RP5-1000K24.2 :

The Knockdown/knockout RNA-Seq assay for RP5-1000K24.2 is not avaliable on ENCORE database.