NDUFA8

General Information

Gene Name : NDUFA8
Gene ID : ENSG00000119421.6
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFA8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFA8	ENSG00000119421.6	52.57	64.17	58.37	ENCSR000AEF
HepG2	NDUFA8	ENSG00000119421.6	74.60	78.07	76.33	ENCSR985KAT
K562	NDUFA8	ENSG00000119421.6	143.30	137.06	140.18	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFA8 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFA8 RNA is bound by 9 proteins.

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eCLIP assay for NDUFA8 is not avaliable on ENCORE database.

9 proteins are bound to NDUFA8 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	124921905	124922034	-	5'-UTR,CDS,intron-Distal	4.85168	68.57616	K562	DDX3X
chr9	124914630	124914685	-	CDS,intron-Distal	3.40837	17.28467	K562	DDX3X
chr9	124906349	124906504	-	3'-UTR,intron-Distal	6.53715	16.77041	HepG2	SUB1
chr9	124914521	124914541	-	CDS,intron-Distal,intron-Proximal	3.97414	15.21546	K562	YBX3
chr9	124921905	124921998	-	5'-UTR,CDS,intron-Distal	3.63733	13.78383	HepG2	DDX3X
chr9	124921905	124922005	-	5'-UTR,CDS,intron-Distal	3.05848	9.94907	K562	DROSHA
chr9	124906549	124906621	-	CDS,intron-Distal	3.34235	9.11396	K562	YBX3
chr9	124921904	124922005	-	5'-UTR,CDS,intron-Distal	3.87295	8.13606	K562	UCHL5
chr9	124914541	124914552	-	CDS,intron-Distal	3.28260	7.33020	K562	YBX3
chr9	124910551	124910556	-	CDS,intron-Distal	3.56340	5.95282	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 15 entries

eCLIP assay for NDUFA8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFA8 is not available on ENCORE database.
66 RBPs can affect the levels of NDUFA8.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFA8 is not available on ENCORE database.

66 RBPs can affect the gene expression of NDUFA8 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFA8	ENSG00000119421.5	602.80900	1151.98260	-0.93430	20.75270	19.33310	HepG2	RECQL
NDUFA8	ENSG00000119421.5	455.98780	929.52230	-1.02750	18.68650	17.58350	HepG2	RBM22
NDUFA8	ENSG00000119421.5	559.40120	982.56150	-0.81270	16.36890	15.22830	HepG2	SRSF9
NDUFA8	ENSG00000119421.5	626.31550	1207.52320	-0.94710	15.72070	14.38210	K562	HNRNPC
NDUFA8	ENSG00000119421.5	746.30350	1236.83710	-0.72880	13.60340	12.57230	HepG2	NELFE
NDUFA8	ENSG00000119421.5	682.56130	1111.37840	-0.70330	12.54400	11.54540	HepG2	PTBP1
NDUFA8	ENSG00000119421.5	646.97830	1085.59730	-0.74670	12.20580	11.15650	HepG2	TAF15
NDUFA8	ENSG00000119421.5	1523.99460	2531.85950	-0.73230	11.38020	10.30910	K562	AQR
NDUFA8	ENSG00000119421.5	696.14080	1092.19950	-0.64980	11.15040	10.06540	HepG2	PCBP1
NDUFA8	ENSG00000119421.5	759.73630	1157.04440	-0.60690	9.71530	8.70680	HepG2	SF3B4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 74 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFA8 is not available on ENCORE database.

13 RBPs can affect the splicing of NDUFA8 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.05900	0.00000	0.00057	excluded	K562	HNRNPK
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	0.08600	0.00000	0.00168	included	HepG2	PRPF4
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.09500	0.00000	0.00008	excluded	K562	HNRNPC
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.07600	0.00001	0.00117	excluded	K562	PRPF8
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.07100	0.00001	0.00016	excluded	HepG2	U2AF2
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914720			124910390	124910556	124921905	124922066	-0.06700	0.00001	0.00408	excluded	K562	APOBEC3C
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.10100	0.00001	0.00105	excluded	HepG2	HNRNPC
MXE	NDUFA8	ENSG00000119421.5	chr9	-	124910390	124910556	124914523	124914687	124906336	124906657	124921905	124922098	-0.13300	0.00001	0.00324	2included	K562	XRCC6
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.08300	0.00004	0.00526	excluded	HepG2	RBM22
SE	NDUFA8	ENSG00000119421.5	chr9	-	124914523	124914687			124910390	124910556	124921905	124922066	-0.07800	0.00017	0.01741	excluded	HepG2	TIAL1

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFA8

General Information

Functions

Localization

Domains (AlphaFold: NDUFA8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFA8 is not avaliable on ENCORE database.

9 proteins are bound to NDUFA8 RNA:

eCLIP assay for NDUFA8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFA8 is not available on ENCORE database.

66 RBPs can affect the gene expression of NDUFA8 :

The Knockdown/knockout RNA-Seq assay for NDUFA8 is not available on ENCORE database.

13 RBPs can affect the splicing of NDUFA8 :

The Knockdown/knockout RNA-Seq assay for NDUFA8 is not avaliable on ENCORE database.