IDH3G

General Information

Gene Name       : IDH3G
Gene ID             : ENSG00000067829.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IDH3G)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IDH3GENSG00000067829.1820.6443.7232.18ENCSR000AEF
HepG2IDH3GENSG00000067829.1846.1919.0432.61ENCSR985KAT
K562IDH3GENSG00000067829.1857.8848.7853.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IDH3G is not avaliable on ENCORE database.



Proteins bound to RNA
  • IDH3G RNA is bound by 16 proteins.  







eCLIP assay for IDH3G is not avaliable on ENCORE database.





16 proteins are bound to IDH3G RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX153051296153051406-3'-UTR,CDS,intron-Distal3.125833.01207K562IGF2BP2
chrX153051313153051363-3'-UTR,CDS,intron-Distal4.205847.70480K562YBX3
chrX153059699153059723-5'-UTR,CDS,intron-Distal3.733923.08493K562DDX3X
chrX153059723153059822-5'-UTR,CDS,intron-Distal,intron-Proximal3.072954.03406K562DDX3X
chrX153056222153056268-5'-UTR,CDS,intron-Distal,intron-Proximal3.8281910.55329K562PRPF8
chrX153059658153059720-5'-UTR,CDS,intron-Distal4.431319.10443HepG2PRPF8
chrX153056230153056316-5'-UTR,CDS,intron-Distal,intron-Proximal4.3124116.80068HepG2PRPF8
chrX153056236153056265-5'-UTR,intron-Distal,intron-Proximal3.199633.49168K562AQR
chrX153053529153053541-CDS,intron-Distal,intron-Proximal3.181614.29172K562YBX3
chrX153055993153056030-CDS,intron-Distal,intron-Proximal4.986076.04760K562AQR
chrX153052557153052621-CDS,intron-Distal,intron-Proximal3.699634.41130K562AQR
chrX153053350153053358-CDS,intron-Distal4.4569733.37057K562YBX3
chrX153055271153055309-CDS,intron-Distal,intron-Proximal4.275874.49756K562BUD13
chrX153055268153055327-CDS,intron-Distal,intron-Proximal3.742255.55667K562MTPAP
chrX153053336153053344-CDS,intron-Distal3.047689.49523K562YBX3
chrX153052505153052570-CDS,intron-Distal,intron-Proximal4.591935.27053HepG2PPIG
chrX153053375153053384-CDS,intron-Distal4.8026326.65096K562YBX3
chrX153052941153053042-CDS,intron-Distal,intron-Proximal3.070366.35635K562UCHL5
chrX153051840153051855-CDS,intron-Distal4.030333.01531K562YBX3
chrX153052563153052585-CDS,intron-Distal,intron-Proximal4.111724.32914K562YBX3
chrX153054583153054664-CDS,intron-Distal,intron-Proximal3.568846.30554K562U2AF2
chrX153052938153052996-CDS,intron-Distal3.478934.13746HepG2PPIG
chrX153055613153055652-CDS,intron-Distal,intron-Proximal4.031285.05356HepG2PRPF8
chrX153053344153053350-CDS,intron-Distal4.3768230.06581K562YBX3
chrX153052977153053021-CDS,intron-Distal,intron-Proximal3.109037.19068K562YBX3
chrX153055753153055812-intron-Distal,intron-Proximal3.363685.67192K562SF3B4
chrX153059358153059590-intron-Distal3.362956.32455K562NONO
chrX153055548153055611-intron-Distal,intron-Proximal3.369585.03897K562PRPF8
chrX153056221153056236-intron-Distal,intron-Proximal5.123636.44303K562AQR
chrX153055031153055090-intron-Distal,intron-Proximal3.912526.52981K562MTPAP
chrX153059603153059651-intron-Distal5.041955.24235HepG2EFTUD2
chrX153054988153055108-intron-Distal,intron-Proximal3.907637.33269K562PTBP1
chrX153058549153058628-intron-Distal3.176214.63993K562TARDBP
chrX153055905153055957-intron-Distal,intron-Proximal3.162636.02419K562AQR
chrX153059535153059622-intron-Distal4.271098.48965K562EFTUD2
chrX153055899153055956-intron-Distal,intron-Proximal3.844743.50006HepG2SF3B4
chrX153058529153058618-intron-Distal3.436784.71513K562NONO
chrX153055922153055970-intron-Distal,intron-Proximal4.738117.37772HepG2EFTUD2
chrX153053599153053676-intron-Distal,intron-Proximal4.3634610.47661K562SF3B4
chrX153055907153055970-intron-Distal,intron-Proximal3.972483.84029K562DROSHA
chrX153055587153055650-intron-Distal,intron-Proximal6.3587916.13178K562AQR
chrX153059450153059591-intron-Distal4.3018511.04858HepG2EFTUD2
chrX153054940153055091-intron-Distal,intron-Proximal4.6595015.67482K562U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IDH3G is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IDH3G is not available on ENCORE database.

  • 76 RBPs can affect the levels of IDH3G.  








The Knockdown/knockout RNA-Seq assay for IDH3G is not available on ENCORE database.





76 RBPs can affect the gene expression of IDH3G :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IDH3GENSG00000067829.14293.47990371.81220-0.341302.019501.48490HepG2ACO1
IDH3GENSG00000067829.14792.48910417.463500.924608.265207.39970HepG2AKAP1
IDH3GENSG00000067829.14536.68000365.060700.555803.394802.25100HepG2AKAP8
IDH3GENSG00000067829.14591.50640345.388500.776102.421101.68100HepG2ASCC1
IDH3GENSG00000067829.14779.07680497.712300.646405.852505.02110HepG2BOP1
IDH3GENSG00000067829.14384.24620231.541300.730703.420302.56270HepG2CNOT7
IDH3GENSG00000067829.14669.69670400.159200.742802.180601.59940HepG2CELF1
IDH3GENSG00000067829.14440.74510343.865200.358002.599601.78820HepG2DDX19B
IDH3GENSG00000067829.14169.73080264.94770-0.642502.742401.83500HepG2DDX24
IDH3GENSG00000067829.14494.85180264.225600.905106.462905.33940HepG2DDX55
IDH3GENSG00000067829.14546.98500343.609400.670604.391603.62760HepG2DDX6
IDH3GENSG00000067829.14331.88720243.200200.448402.604301.91740HepG2DNAJC21
IDH3GENSG00000067829.14319.09150241.019000.404702.483501.85990HepG2DNAJC2
IDH3GENSG00000067829.14501.96060330.182000.604203.844503.15270HepG2EIF2S1
IDH3GENSG00000067829.14334.42780424.49460-0.344102.079201.33630HepG2EIF4G1
IDH3GENSG00000067829.14752.78900554.240900.441604.076903.37210HepG2ETF1
IDH3GENSG00000067829.14576.29160341.539700.754605.866204.91250HepG2G3BP1
IDH3GENSG00000067829.14351.30540518.01950-0.560303.216402.53110HepG2GPKOW
IDH3GENSG00000067829.14533.76890392.014200.445203.780703.00040HepG2HNRNPL
IDH3GENSG00000067829.14662.51490494.351800.422302.619802.00420HepG2HNRNPLL
IDH3GENSG00000067829.14474.81040271.290600.807409.259708.19900HepG2HNRNPU
IDH3GENSG00000067829.14482.69850347.129900.475502.500201.85500HepG2IGF2BP2
IDH3GENSG00000067829.14366.55420277.116200.403402.822502.08360HepG2ILF2
IDH3GENSG00000067829.14565.39140376.638800.586003.195001.65640HepG2NKRF
IDH3GENSG00000067829.14516.56430377.307400.453103.736803.05360HepG2PCBP1
IDH3GENSG00000067829.14339.11040241.971400.486802.554201.84300HepG2PPIL4
IDH3GENSG00000067829.14569.76130407.315300.484103.273402.63240HepG2PUF60
IDH3GENSG00000067829.14598.23660432.364000.468404.648803.92270HepG2PUM1
IDH3GENSG00000067829.14534.84240378.712300.497904.750503.98470HepG2PUS1
IDH3GENSG00000067829.14309.73890415.79470-0.424802.479801.88300HepG2QKI
IDH3GENSG00000067829.14382.08470501.32090-0.391802.268301.64090HepG2RPLP0
IDH3GENSG00000067829.14321.79280239.253600.427501.987201.45810HepG2RPS19
IDH3GENSG00000067829.14451.42260241.602800.9017011.075009.92050HepG2SAFB2
IDH3GENSG00000067829.14353.03750489.33400-0.471002.687401.99210HepG2SF3B1
IDH3GENSG00000067829.14423.44050281.760800.587605.255904.41790HepG2SMN1
IDH3GENSG00000067829.14349.14050544.46150-0.641002.780801.99820HepG2SNRNP70
IDH3GENSG00000067829.14309.20890402.14150-0.379102.259401.68670HepG2SRSF5
IDH3GENSG00000067829.14246.70290339.43000-0.460302.919402.35570HepG2SRSF9
IDH3GENSG00000067829.14639.97680457.365400.484604.747403.97170HepG2SUCLG1
IDH3GENSG00000067829.14578.87120400.910900.529902.796101.46100HepG2SUGP2
IDH3GENSG00000067829.14255.60190375.01900-0.553103.737503.10220HepG2TAF15
IDH3GENSG00000067829.14436.66960265.963200.715207.262606.42470HepG2TRIM56
IDH3GENSG00000067829.14583.74290446.510000.386503.211102.46950HepG2UPF1
IDH3GENSG00000067829.14589.39060458.939900.360802.751701.70650HepG2UTP18
IDH3GENSG00000067829.14355.73630258.928500.458201.988101.36570HepG2XRN2
IDH3GENSG00000067829.141645.372701109.153400.5689011.2575010.20730K562AGGF1
IDH3GENSG00000067829.141576.893301218.819200.371503.421802.30320K562AKAP8
IDH3GENSG00000067829.141828.776101154.131100.664009.545508.24330K562AKAP8L
IDH3GENSG00000067829.14600.257801180.26210-0.9755014.0188012.84150K562AQR
IDH3GENSG00000067829.141559.238301210.974000.364604.462803.27320K562ATP5C1
IDH3GENSG00000067829.14720.38370889.07420-0.303502.153701.45340K562CPSF6
IDH3GENSG00000067829.141611.711901241.885600.376003.189202.24030K562DKC1
IDH3GENSG00000067829.14510.12810280.480900.862909.698208.20670K562EIF3G
IDH3GENSG00000067829.14826.10380632.610200.384903.505702.18000K562EIF4B
IDH3GENSG00000067829.14285.09090538.61490-0.917803.268701.36290K562FAM120A
IDH3GENSG00000067829.14629.87830458.841500.457003.257701.67630K562G3BP1
IDH3GENSG00000067829.1454.92130271.64570-2.3063011.313109.68610K562G3BP2
IDH3GENSG00000067829.14932.047101288.81340-0.467604.680903.69900K562GRSF1
IDH3GENSG00000067829.14518.28270874.44350-0.754609.097708.06650K562HNRNPC
IDH3GENSG00000067829.14902.336901127.60960-0.321502.744601.85450K562HNRNPU
IDH3GENSG00000067829.14994.78220480.292101.050404.681403.20360K562IGF2BP2
IDH3GENSG00000067829.14754.50870488.360200.627504.556002.94220K562IGF2BP3
IDH3GENSG00000067829.14518.63730724.86600-0.483002.641301.73150K562KRR1
IDH3GENSG00000067829.14660.73670503.283400.392602.650401.74910K562MATR3
IDH3GENSG00000067829.142048.351001372.086400.578008.591006.80540K562MBNL1
IDH3GENSG00000067829.14958.517401263.72710-0.398805.451304.33940K562MTPAP
IDH3GENSG00000067829.141411.95960961.735300.553904.008902.88970K562NAA15
IDH3GENSG00000067829.141213.060101404.14460-0.211002.443701.73830K562NSUN2
IDH3GENSG00000067829.141431.14310850.193000.751203.540902.38200K562PABPN1
IDH3GENSG00000067829.14780.43110493.206800.662007.456705.17290K562PCBP1
IDH3GENSG00000067829.14868.845101106.55070-0.348902.112701.38500K562PCBP3
IDH3GENSG00000067829.141368.197101811.56250-0.405003.519102.60130K562PUF60
IDH3GENSG00000067829.141454.261301926.88470-0.406004.660703.24580K562PUM1
IDH3GENSG00000067829.141494.273101887.96170-0.337404.005102.84670K562PUM2
IDH3GENSG00000067829.142202.763601144.533400.944504.356503.69760K562PUS1
IDH3GENSG00000067829.141648.671501115.215100.563904.958004.18520K562RBM15
IDH3GENSG00000067829.14362.81350257.355500.495402.856801.50420K562RBM25
IDH3GENSG00000067829.14598.63370807.36960-0.431602.620301.67450K562SF3B1
IDH3GENSG00000067829.141034.395701419.45750-0.456608.010706.51490K562SRPK2
IDH3GENSG00000067829.14632.92790480.461800.397502.229301.58650K562SRSF1
IDH3GENSG00000067829.14578.10250443.315600.382902.259901.32700K562SRSF4
IDH3GENSG00000067829.14735.23380453.871300.695802.434401.45840K562SRSF5
IDH3GENSG00000067829.14785.31930486.161800.691705.609604.58180K562TARDBP
IDH3GENSG00000067829.14660.43460468.983400.493802.529201.75160K562TIA1
IDH3GENSG00000067829.14794.26790460.441600.786503.334902.11490K562TRA2A
IDH3GENSG00000067829.14167.37010271.71840-0.699103.125502.27180K562U2AF2
IDH3GENSG00000067829.141258.614901488.84190-0.242402.642701.94060K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IDH3G is not available on ENCORE database.





17 RBPs can affect the splicing of IDH3G :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIDH3GENSG00000067829.14chrX-153052255153052402153051809153051904153052505153052608-0.148000.000010.00091excludedK562PRPF8
SEIDH3GENSG00000067829.14chrX-153051666153051727153051220153051428153051809153051904-0.169000.000010.00070excludedK562PRPF8
SEIDH3GENSG00000067829.14chrX-153052255153052402153051809153051904153052505153052608-0.078000.000860.01804excludedHepG2U2AF1
SEIDH3GENSG00000067829.14chrX-153052255153052402153051809153051904153052505153052608-0.083000.000440.02054excludedK562FXR1
SEIDH3GENSG00000067829.14chrX-153052255153052402153051809153051904153052505153052608-0.105000.000900.04714excludedK562EFTUD2
SEIDH3GENSG00000067829.14chrX-153051666153051727153051220153051428153051809153051904-0.095000.001060.03209excludedHepG2SF3A3
SEIDH3GENSG00000067829.14chrX-153051666153051727153051220153051428153051809153051904-0.123000.000000.00002excludedK562SF3B1
A3SSIDH3GENSG00000067829.14chrX-153051220153051727153051220153051428153051809153051904-0.147000.000000.00039shorterK562SF3B1
A3SSIDH3GENSG00000067829.14chrX-153051220153051727153051220153051428153051809153051904-0.192000.000110.02058shorterK562PRPF8
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.155000.002460.08822includedHepG2BCCIP
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.077000.007620.04449includedK562PUS1
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.172000.010220.08722includedHepG2SF3A3
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.313000.000030.00085includedHepG2PRPF8
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.202000.000000.00028includedK562SRSF1
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.128000.000490.05405includedK562HNRNPK
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.251000.000000.00007includedK562PRPF8
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.145000.001530.03594includedHepG2FTO
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.263000.000000.00000includedK562RBM22
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.191000.000150.00233includedHepG2U2AF1
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.168000.001870.09265includedK562EIF3G
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.352000.000000.00000includedHepG2TIAL1
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.123000.015480.08919includedHepG2SF3B4
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.175000.001070.01334includedHepG2RBM22
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.414000.000000.00000includedK562EFTUD2
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.253000.000000.00000includedK562AQR
RIIDH3GENSG00000067829.14chrX-1530512201530517271530512201530514281530516661530517270.175000.000070.00269includedK562PTBP1
MXEIDH3GENSG00000067829.14chrX-153052505153052608153052918153053052153051809153051904153053277153053410-0.091000.000020.002132includedK562FXR1
MXEIDH3GENSG00000067829.14chrX-153052505153052608153052918153053052153051809153051904153053277153053410-0.094000.000820.028132includedK562EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IDH3G is not avaliable on ENCORE database.