AC084082.3

General Information

Gene Name       : AC084082.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC084082.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC084082.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC084082.3 RNA is bound by 3 proteins.  







eCLIP assay for AC084082.3 is not avaliable on ENCORE database.





3 proteins are bound to AC084082.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr86702647467026498+intron-Distal3.175187.69052K562LIN28B
chr86702563167025638+intron-Distal3.630837.48413HepG2SSB
chr86702645267026474+intron-Distal4.175184.72426K562LIN28B
chr86702627867026329+intron-Distal4.815504.22343HepG2XPO5
chr86702559367025637+intron-Distal5.1034815.65606K562SSB
chr86702563767025707+intron-Distal3.6834918.97510K562SSB
chr86702649867026529+intron-Distal3.360728.84070K562LIN28B
chr86702559467025631+intron-Distal4.266169.00103HepG2SSB
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC084082.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC084082.3 is not available on ENCORE database.

  • 9 RBPs can affect the levels of AC084082.3.  








The Knockdown/knockout RNA-Seq assay for AC084082.3 is not available on ENCORE database.





9 RBPs can affect the gene expression of AC084082.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC084082.3ENSG00000253190.212.794601.632902.969902.274901.66280HepG2CKAP4
AC084082.3ENSG00000253190.210.462100.0000099999.999902.938302.27860HepG2EIF4A3
AC084082.3ENSG00000253190.27.297800.0000099999.999901.981001.42280HepG2HNRNPA1
AC084082.3ENSG00000253190.27.892000.0000099999.999902.429101.85810HepG2HNRNPU
AC084082.3ENSG00000253190.28.426000.0000099999.999902.260001.66490HepG2MAGOH
AC084082.3ENSG00000253190.28.348600.414604.331601.829901.38580HepG2RBM22
AC084082.3ENSG00000253190.219.058300.516505.205404.275903.00320HepG2SRSF3
AC084082.3ENSG00000253190.217.024200.406005.390004.737804.10260HepG2SSB
AC084082.3ENSG00000253190.210.440800.0000099999.999903.201302.66970HepG2TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC084082.3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AC084082.3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AC084082.3 is not avaliable on ENCORE database.