TRMT2A

General Information

Gene Name       : TRMT2A
Gene ID             : ENSG00000099899.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TRMT2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRMT2AENSG00000099899.146.6920.8613.78ENCSR000AEF
HepG2TRMT2AENSG00000099899.1433.4810.2621.87ENCSR985KAT
K562TRMT2AENSG00000099899.14128.0993.93111.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRMT2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRMT2A RNA is bound by 33 proteins.  







eCLIP assay for TRMT2A is not avaliable on ENCORE database.





33 proteins are bound to TRMT2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr222009959720099684-3'-UTR,intron-Distal4.025049.36957K562FUS
chr222009986620099883-3'-UTR,intron-Distal4.890764.34551K562ZC3H11A
chr222009950220099696-3'-UTR,intron-Distal4.2680314.24877K562UPF1
chr222009988420099924-3'-UTR,intron-Distal,intron-Proximal3.308863.95732K562LSM11
chr222010023920100281-3'-UTR,CDS,intron-Distal3.422894.68114K562DDX55
chr222009944220099498-3'-UTR,intron-Distal,intron-Proximal4.155164.28365K562NOLC1
chr222009985820099950-3'-UTR,intron-Distal,intron-Proximal3.105513.01779K562NOLC1
chr222010012720100196-3'-UTR,CDS,intron-Distal4.7184510.67414K562LSM11
chr222009989920099976-3'-UTR,intron-Distal,intron-Proximal4.190453.61803HepG2ZC3H11A
chr222009989320099927-3'-UTR,intron-Distal,intron-Proximal3.666743.04470K562FUS
chr222010411420104168-3'-UTR,CDS,intron-Distal,intron-Proximal4.699636.99120K562AQR
chr222010001120100063-3'-UTR,intron-Distal,intron-Proximal3.007953.47856K562LSM11
chr222010022220100280-3'-UTR,CDS,intron-Distal3.358624.32859K562LSM11
chr222009994820100013-3'-UTR,intron-Distal,intron-Proximal4.133034.50258HepG2LSM11
chr222009957320099649-3'-UTR,intron-Distal3.731207.44673K562ZC3H11A
chr222010002420100116-3'-UTR,CDS,intron-Distal,intron-Proximal3.2467710.15910K562DDX55
chr222009995420100007-3'-UTR,intron-Distal,intron-Proximal4.212068.58756K562LIN28B
chr222010012320100218-3'-UTR,CDS,intron-Distal3.618463.40404HepG2LSM11
chr222009972420099805-3'-UTR,intron-Distal,intron-Proximal3.457463.95966K562FUS
chr222009990820099957-3'-UTR,intron-Distal,intron-Proximal5.0941311.85921K562ZC3H11A
chr222010456520104623-5'-UTR,intron-Distal,intron-Proximal4.305686.98150K562DDX3X
chr222010464720104704-5'-UTR,intron-Distal3.411405.06399K562DDX3X
chr222010324020103303-CDS,intron-Distal,intron-Proximal3.230745.82857K562SRSF1
chr222010096620101021-CDS,intron-Distal,intron-Proximal3.345704.08845K562SRSF1
chr222010355920103602-CDS,intron-Distal,intron-Proximal3.686454.13746HepG2PPIG
chr222010286120102929-CDS,intron-Distal,intron-Proximal3.8651320.93107K562DDX24
chr222010069520100749-CDS,intron-Distal,intron-Proximal4.1791013.49366K562DDX24
chr222010255420102662-CDS,intron-Distal,intron-Proximal4.4319627.04294K562DDX24
chr222010375020103815-CDS,intron-Distal,intron-Proximal3.176956.07803K562FMR1
chr222010105720101210-CDS,intron-Distal,intron-Proximal3.602065.23111K562HNRNPK
chr222010103820101077-CDS,intron-Distal,intron-Proximal4.100693.98315HepG2SF3B4
chr222010371620103775-CDS,intron-Distal,intron-Proximal4.5975311.77933K562RBM15
chr222010064520100695-CDS,intron-Distal4.061176.82493K562DDX24
chr222010069320100747-CDS,intron-Distal,intron-Proximal3.237753.22948K562LSM11
chr222010126920101280-CDS,intron-Distal3.328133.69775K562YBX3
chr222010043320100482-CDS,intron-Distal,intron-Proximal3.491475.86107HepG2PPIG
chr222010130720101366-CDS,intron-Distal,intron-Proximal3.039037.94218K562BUD13
chr222010325820103302-CDS,intron-Distal,intron-Proximal3.466163.32039HepG2PPIG
chr222010257620102659-CDS,intron-Distal,intron-Proximal6.07565400.00000K562SF3B4
chr222010130220101360-CDS,intron-Distal,intron-Proximal4.5069811.58353K562AQR
chr222010289020102947-CDS,intron-Distal,intron-Proximal3.825903.48722HepG2PRPF4
chr222010067620100744-CDS,intron-Distal,intron-Proximal3.660687.55042HepG2PPIG
chr222010356020103569-CDS,intron-Distal,intron-Proximal3.434103.62863K562SRSF1
chr222010104320101067-CDS,intron-Distal,intron-Proximal3.324685.67192K562SF3B4
chr222010096620101029-CDS,intron-Distal,intron-Proximal4.371483.90287K562LIN28B
chr222010204220102148-CDS,intron-Distal,intron-Proximal4.9506212.18707HepG2PRPF8
chr222010284220102926-CDS,intron-Distal,intron-Proximal3.0232121.38109K562EFTUD2
chr222010233720102400-CDS,intron-Distal,intron-Proximal3.1111611.44762K562UCHL5
chr222010095920101019-CDS,intron-Distal,intron-Proximal5.116746.16445HepG2PPIG
chr222010075620100826-CDS,intron-Distal,intron-Proximal4.275883.74254HepG2SF3B4
chr222010325020103301-CDS,intron-Distal,intron-Proximal3.212187.63960K562UCHL5
chr222010203720102104-CDS,intron-Distal,intron-Proximal3.9013431.43150K562PRPF8
chr222010440520104414-CDS,intron-Distal,intron-Proximal4.437633.28019K562DDX3X
chr222010069120100744-CDS,intron-Distal,intron-Proximal3.259283.86151K562SRSF1
chr222010378520103831-CDS,intron-Distal3.094883.78791K562RBM15
chr222010070420100747-CDS,intron-Distal,intron-Proximal3.158263.84952K562DDX55
chr222010217420102202-CDS,intron-Distal,intron-Proximal5.179759.32383K562DDX24
chr222010228320102342-CDS,intron-Distal,intron-Proximal3.117366.89313K562ZNF622
chr222010258920102668-CDS,intron-Distal,intron-Proximal3.5382226.18245K562EFTUD2
chr222010095920101018-CDS,intron-Distal,intron-Proximal4.9285013.69276K562DDX24
chr222010159220101693-intron-Distal3.225438.14560K562EWSR1
chr222010308820103139-intron-Distal,intron-Proximal3.438926.68363K562TIA1
chr222010076820100830-intron-Distal,intron-Proximal5.4690613.59652K562EFTUD2
chr222010159820101726-intron-Distal4.4717310.66980K562FUS
chr222010158120101690-intron-Distal4.1287513.41139K562GTF2F1
chr222010352120103559-intron-Distal,intron-Proximal5.021564.65563K562AQR
chr222010174620101799-intron-Distal3.573254.47051K562EWSR1
chr222010158120101674-intron-Distal5.4640918.76043K562AKAP8L
chr222010186820101903-intron-Distal3.312373.73564K562RBFOX2
chr222010195220102002-intron-Distal,intron-Proximal3.794949.43801K562BUD13
chr222010160420101666-intron-Distal4.289337.79539K562UCHL5
chr222010264820102673-intron-Distal,intron-Proximal4.026533.41594K562SMNDC1
chr222010414920104183-intron-Distal,intron-Proximal3.861538.44995K562PRPF8
chr222010158920101687-intron-Distal3.499846.23791HepG2PRPF4
chr222010159120101679-intron-Distal3.8077712.49655K562CSTF2T
chr222010413920104275-intron-Distal,intron-Proximal5.004448.62201K562GTF2F1
chr222010265620102731-intron-Distal,intron-Proximal3.566279.91173K562RBFOX2
chr222010268620102744-intron-Distal,intron-Proximal5.2818412.54693HepG2EFTUD2
chr222010087220100922-intron-Distal,intron-Proximal3.341188.23020K562EFTUD2
chr222010160020101650-intron-Distal3.663124.92987K562MTPAP
chr222010158920101667-intron-Distal4.355009.20374K562DDX51
chr222010076620100818-intron-Distal,intron-Proximal5.0906710.03191K562SF3B4
chr222010141520101466-intron-Distal,intron-Proximal3.131544.33160K562FUS
chr222010414820104192-intron-Distal,intron-Proximal4.393066.95984K562EFTUD2
chr222010160520101720-intron-Distal3.198828.14754K562DROSHA
chr222010087420100918-intron-Distal,intron-Proximal4.369183.02731K562AKAP8L
chr222010297820103060-intron-Distal,intron-Proximal3.390194.95463K562RBM15
chr222010195120101971-intron-Distal5.3492316.18931K562AQR
chr222010089320100924-intron-Distal,intron-Proximal4.556404.71718K562SMNDC1
chr222010161020101681-intron-Distal5.088338.08215HepG2EFTUD2
chr222010189720101946-intron-Distal3.582998.86113K562AQR
chr222010077720100819-intron-Distal,intron-Proximal4.5805910.08597K562PRPF8
chr222010266320102740-intron-Distal,intron-Proximal4.0697816.40089K562DDX24
chr222010260620102677-intron-Distal,intron-Proximal4.560564.82767HepG2SF3B4
chr222010419720104264-intron-Distal,intron-Proximal3.741254.70430K562CSTF2T
chr222010314520103178-intron-Distal,intron-Proximal3.124703.77680K562TIA1
chr222010088520100930-intron-Distal,intron-Proximal3.498544.76898K562CSTF2T
chr222010088520100925-intron-Distal,intron-Proximal4.281206.75234K562PRPF8
chr222010270120102753-intron-Distal,intron-Proximal3.6601610.21568K562BUD13
chr222010241820102478-intron-Distal,intron-Proximal5.3980512.58991K562EFTUD2
chr222010078920100840-intron-Distal,intron-Proximal3.131543.60351K562FUS
chr222010053120100578-intron-Distal,intron-Proximal5.5470717.59328K562SF3B4
chr222010192620102002-intron-Distal,intron-Proximal4.0593424.38050K562EFTUD2
chr222010268720102748-intron-Distal,intron-Proximal3.3052121.33403K562PRPF8
chr222010197120102013-intron-Distal,intron-Proximal4.6945418.21561K562AQR
chr222010159620101670-intron-Distal4.0756221.57180K562EFTUD2
chr222010160520101632-intron-Distal3.843545.20093K562DDX24
chr222010134220101390-intron-Distal,intron-Proximal3.310008.58414K562SF3B4
chr222010193920101982-intron-Distal3.034637.03485K562PRPF8
chr222010420620104251-intron-Distal,intron-Proximal3.274967.59392K562EFTUD2
chr222010201320102097-intron-Distal,intron-Proximal4.7167940.03645K562AQR
chr222010266820102746-intron-Distal,intron-Proximal4.0916223.06957K562EFTUD2
chr222010137520101495-intron-Distal,intron-Proximal5.3452010.25168K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRMT2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRMT2A is not available on ENCORE database.

  • 103 RBPs can affect the levels of TRMT2A.  








The Knockdown/knockout RNA-Seq assay for TRMT2A is not available on ENCORE database.





103 RBPs can affect the gene expression of TRMT2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRMT2AENSG00000099899.10200.46540352.22640-0.813107.813906.89650HepG2ACO1
TRMT2AENSG00000099899.10145.48620227.03810-0.642102.897002.11000HepG2CALR
TRMT2AENSG00000099899.10260.40320130.332800.998404.719503.71500HepG2CNOT7
TRMT2AENSG00000099899.10322.50400229.064900.493502.932602.27400HepG2CELF1
TRMT2AENSG00000099899.10324.81060246.315700.399002.318401.63190HepG2DAZAP1
TRMT2AENSG00000099899.10436.49560336.977600.373202.331601.70100HepG2DKC1
TRMT2AENSG00000099899.10204.53750144.290300.503302.227301.59040HepG2DNAJC21
TRMT2AENSG00000099899.10234.83320143.028100.715204.839804.01600HepG2DNAJC2
TRMT2AENSG00000099899.10319.96970222.345000.525002.221401.39350HepG2EEF2
TRMT2AENSG00000099899.10357.88480232.773900.620503.676002.74520HepG2EIF4G2
TRMT2AENSG00000099899.10198.14920120.671400.715402.694901.59680HepG2GRSF1
TRMT2AENSG00000099899.10234.78380110.322601.089503.291701.79640HepG2HNRNPA0
TRMT2AENSG00000099899.10215.87280145.672800.567402.016801.45510HepG2HNRNPA1
TRMT2AENSG00000099899.10513.43160366.478800.486302.115201.49890HepG2HNRNPK
TRMT2AENSG00000099899.10392.35670224.379200.806108.190807.08650HepG2HNRNPL
TRMT2AENSG00000099899.10292.67560160.966400.862405.702904.85750HepG2HNRNPU
TRMT2AENSG00000099899.10429.57460333.235000.366302.004501.38100HepG2IGF2BP1
TRMT2AENSG00000099899.10264.46710164.421200.685604.884003.93200HepG2ILF2
TRMT2AENSG00000099899.10215.16560127.080000.759602.616001.34160HepG2ILF3
TRMT2AENSG00000099899.10257.07150124.302401.048206.332904.44170HepG2KHDRBS1
TRMT2AENSG00000099899.10431.61210244.245300.821305.037104.01150HepG2NOL12
TRMT2AENSG00000099899.10249.58690149.219600.742002.977701.47220HepG2NOLC1
TRMT2AENSG00000099899.10196.45860119.159700.721202.461301.63400HepG2PABPC1
TRMT2AENSG00000099899.10232.99000149.244900.642503.250901.91480HepG2PKM
TRMT2AENSG00000099899.10276.18960143.568500.943807.694006.51340HepG2PPIL4
TRMT2AENSG00000099899.10207.18900288.92950-0.479802.674701.91240HepG2PRPF4
TRMT2AENSG00000099899.10358.34000233.149500.620003.862603.17120HepG2PUF60
TRMT2AENSG00000099899.10517.63500247.493701.0644017.0804015.86630HepG2PUM1
TRMT2AENSG00000099899.10365.21750247.315900.562303.508702.75720HepG2PUM2
TRMT2AENSG00000099899.10270.48740502.89160-0.8947010.336409.47730HepG2RBM22
TRMT2AENSG00000099899.10280.44200383.57020-0.451802.283701.66570HepG2RBM25
TRMT2AENSG00000099899.10362.92180192.535400.914402.673301.69700HepG2RBM27
TRMT2AENSG00000099899.10347.42780156.349401.151805.185903.72520HepG2RCC2
TRMT2AENSG00000099899.10269.98180175.630000.620203.167202.51590HepG2RPS19
TRMT2AENSG00000099899.10333.43100177.529800.909202.863702.05060HepG2RPS2
TRMT2AENSG00000099899.10311.42320130.983001.249408.695607.30490HepG2RPS3A
TRMT2AENSG00000099899.10285.39550143.345400.993408.875007.82160HepG2SAFB2
TRMT2AENSG00000099899.10217.86970123.340200.820703.770102.24820HepG2SART3
TRMT2AENSG00000099899.10222.42390124.366300.838603.504601.75510HepG2SBDS
TRMT2AENSG00000099899.10410.01340201.221801.026802.796201.43520HepG2SF1
TRMT2AENSG00000099899.10397.02070223.544200.828608.633907.50170HepG2SLBP
TRMT2AENSG00000099899.10277.55050167.161000.731405.461504.60940HepG2SMN1
TRMT2AENSG00000099899.10355.70220158.028601.170409.076407.28740HepG2SMNDC1
TRMT2AENSG00000099899.10288.26080150.815900.934504.904002.74100HepG2SND1
TRMT2AENSG00000099899.10294.29560567.98680-0.9486013.3509012.46980HepG2SRFBP1
TRMT2AENSG00000099899.10287.47730424.07540-0.560904.225503.67130HepG2SRSF1
TRMT2AENSG00000099899.10311.33680230.195400.435502.380301.79430HepG2SRSF5
TRMT2AENSG00000099899.10188.48100345.00210-0.872208.390707.52150HepG2SRSF9
TRMT2AENSG00000099899.10657.79860493.128200.415603.238602.69400HepG2SSB
TRMT2AENSG00000099899.10225.74780113.978200.985905.621204.00410HepG2STIP1
TRMT2AENSG00000099899.10499.87300261.800500.9330012.1160010.97160HepG2SUCLG1
TRMT2AENSG00000099899.10184.30670381.15690-1.0483010.823109.82960HepG2TAF15
TRMT2AENSG00000099899.10232.63590350.25100-0.590302.991802.12600HepG2TIA1
TRMT2AENSG00000099899.10303.03020156.394100.954207.688606.93180HepG2TIAL1
TRMT2AENSG00000099899.10278.45440157.808100.819206.372505.57980HepG2TRIM56
TRMT2AENSG00000099899.10455.19710227.769300.998809.077107.32320HepG2TUFM
TRMT2AENSG00000099899.10250.04790357.50100-0.515702.502401.90310HepG2U2AF1
TRMT2AENSG00000099899.10489.41640241.085101.021407.755806.32720HepG2UBE2L3
TRMT2AENSG00000099899.10247.96900135.727100.869404.591903.61020HepG2UCHL5
TRMT2AENSG00000099899.10224.86160117.327800.938404.896003.42570HepG2XPO5
TRMT2AENSG00000099899.10424.04840226.216800.906405.498204.48770HepG2XRN2
TRMT2AENSG00000099899.10277.30330369.89360-0.415602.832602.28100HepG2ZNF622
TRMT2AENSG00000099899.101783.106802490.36870-0.482005.204003.51690K562ABCF1
TRMT2AENSG00000099899.103395.215702580.418800.395807.899307.01010K562AGGF1
TRMT2AENSG00000099899.103163.501902685.062700.236501.920201.37180K562AKAP8L
TRMT2AENSG00000099899.103355.403302817.314900.252103.078802.11290K562ATP5C1
TRMT2AENSG00000099899.103780.705505049.21760-0.417406.735305.23070K562CELF1
TRMT2AENSG00000099899.102177.487201673.963300.379305.282103.27440K562DDX6
TRMT2AENSG00000099899.102066.050401271.720800.700002.777201.49620K562EEF2
TRMT2AENSG00000099899.10867.35260569.644000.606507.184105.91310K562EIF3G
TRMT2AENSG00000099899.101997.837501553.429500.362904.317302.81860K562EIF4B
TRMT2AENSG00000099899.10813.915201510.53850-0.892103.593702.28310K562FKBP4
TRMT2AENSG00000099899.10798.339301314.86700-0.719808.993007.40550K562FMR1
TRMT2AENSG00000099899.102125.577201793.888000.244702.695202.09670K562FXR1
TRMT2AENSG00000099899.1061.47560384.98680-2.6467014.9372012.99500K562G3BP2
TRMT2AENSG00000099899.103221.548002519.890300.354303.036901.92520K562HNRNPL
TRMT2AENSG00000099899.101849.698101472.611000.328802.165601.34630K562HNRNPM
TRMT2AENSG00000099899.101667.32120891.056800.903803.538502.32420K562IGF2BP2
TRMT2AENSG00000099899.101292.45030906.049100.512302.512401.39000K562IGF2BP3
TRMT2AENSG00000099899.10637.262401053.52390-0.725304.546703.31480K562KRR1
TRMT2AENSG00000099899.101364.35000935.782100.543904.677303.57790K562MAGOH
TRMT2AENSG00000099899.103332.442704376.96920-0.393404.495203.05240K562MSI2
TRMT2AENSG00000099899.103512.953104491.73060-0.354603.430501.74940K562NOL12
TRMT2AENSG00000099899.101912.554601211.912100.658103.492902.00430K562NONO
TRMT2AENSG00000099899.102357.719401711.570600.462003.159501.60600K562NUSAP1
TRMT2AENSG00000099899.101597.664101983.03030-0.311703.115602.26300K562POLR2G
TRMT2AENSG00000099899.102626.552902032.436900.369903.420902.49250K562PPIG
TRMT2AENSG00000099899.102080.401701557.916700.417103.121202.15380K562PSIP1
TRMT2AENSG00000099899.101387.60300909.222000.609807.388306.34030K562PTBP1
TRMT2AENSG00000099899.103251.963004480.35090-0.462305.209304.09270K562PUF60
TRMT2AENSG00000099899.103678.305904765.66880-0.373605.361803.83600K562PUM1
TRMT2AENSG00000099899.103739.009104669.29690-0.320505.037803.72660K562PUM2
TRMT2AENSG00000099899.103266.691002662.702700.294802.695402.15750K562PUS1
TRMT2AENSG00000099899.10600.79320430.392200.481103.424901.40800K562QKI
TRMT2AENSG00000099899.103467.478202594.520900.418307.122806.20040K562RBM15
TRMT2AENSG00000099899.101364.71170871.462000.647003.419702.48010K562RBM22
TRMT2AENSG00000099899.102534.888101767.070200.520505.445203.92410K562SAFB
TRMT2AENSG00000099899.102301.387902739.92400-0.251603.106902.24290K562SF3A3
TRMT2AENSG00000099899.10653.195601173.39170-0.845108.597306.80760K562SF3B1
TRMT2AENSG00000099899.10635.43730399.908500.668006.491105.14200K562SF3B4
TRMT2AENSG00000099899.101765.519201348.148000.389002.426201.48210K562SRFBP1
TRMT2AENSG00000099899.102190.712502807.12100-0.357707.532906.06580K562SRPK2
TRMT2AENSG00000099899.101540.03860891.417500.788706.384505.32160K562SRSF1
TRMT2AENSG00000099899.101511.564301053.538100.520706.063904.39620K562SRSF4
TRMT2AENSG00000099899.101620.27300842.066600.944107.955806.07670K562SRSF5
TRMT2AENSG00000099899.101874.256802348.87220-0.325602.615201.30310K562SSRP1
TRMT2AENSG00000099899.102602.910801989.093700.387904.844803.75160K562SYNCRIP
TRMT2AENSG00000099899.101515.16610902.007300.748202.861902.14320K562TARDBP
TRMT2AENSG00000099899.101633.73150870.131300.908805.478204.26540K562TIA1
TRMT2AENSG00000099899.101639.25620854.249000.940208.063105.93790K562TRA2A
TRMT2AENSG00000099899.103317.254503953.00490-0.253003.626902.16360K562TROVE2
TRMT2AENSG00000099899.10195.09470385.08550-0.981005.146404.05550K562U2AF2
TRMT2AENSG00000099899.103438.105702944.116500.223703.236202.46190K562UPF1
TRMT2AENSG00000099899.103139.147803929.31650-0.323903.512802.04930K562WRN
TRMT2AENSG00000099899.103061.728703736.69710-0.287402.645301.80450K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRMT2A is not available on ENCORE database.





7 RBPs can affect the splicing of TRMT2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRMT2AENSG00000099899.10chr22-201006402010075720100433201005302010095420101030-0.106000.000230.01145excludedK562PRPF8
SETRMT2AENSG00000099899.10chr22-201006402010077820100414201005302010095420101084-0.080000.000350.00503excludedK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010095420101139201009542010103020101208201013310.097000.000100.01398longerK562AKAP8L
A3SSTRMT2AENSG00000099899.10chr22-201027882010285820102788201028282010295120102970-0.301000.000240.05588shorterK562SUPV3L1
A3SSTRMT2AENSG00000099899.10chr22-201009542010111020100954201010302010120820101331-0.127000.000150.02387shorterK562FXR1
A3SSTRMT2AENSG00000099899.10chr22-2010041420100549201004142010053020100640201007570.267000.000000.00000longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010064020100827201006402010075720100954201010840.184000.000000.00000longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010295120103077201029512010297020103194201033030.184000.000000.00000longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010200820102229201020082010220820102283201023990.120000.000000.00000longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010095420101110201009542010103020101208201013310.201000.000000.00000longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010248720102690201024872010260220102788201029700.147000.000010.00012longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010440520104514201044052010449520104619201047260.241000.012020.06185longerK562AQR
A3SSTRMT2AENSG00000099899.10chr22-2010095420101139201009542010103020101208201013310.125000.000000.00020longerK562PUS1
A5SSTRMT2AENSG00000099899.10chr22-201027882010314520102997201031452010248720102602-0.215000.000360.04872shorterK562SUPV3L1
RITRMT2AENSG00000099899.10chr22-201027882010297020102788201028282010295120102970-0.074000.000870.03891excludedK562SUPV3L1
MXETRMT2AENSG00000099899.10chr22-20100640201007572010095420101110201004142010053020101208201013310.057000.000020.000311includedK562AQR
MXETRMT2AENSG00000099899.10chr22-20100640201007572010095420101084201004332010053020101208201013310.062000.001560.013411includedK562AQR
MXETRMT2AENSG00000099899.10chr22-20100954201010842010120820101331201006402010075720102096201022080.104000.005360.038131includedK562AQR
MXETRMT2AENSG00000099899.10chr22-20100954201011102010120820101331201006402010075720102096201022080.104000.005590.039551includedK562AQR
MXETRMT2AENSG00000099899.10chr22-20102951201029702010299720103077201024872010260220103194201033030.284000.000340.003531includedK562AQR
MXETRMT2AENSG00000099899.10chr22-20100954201010302010120820101331201006402010075720102096201022080.112000.003320.025531includedK562AQR
MXETRMT2AENSG00000099899.10chr22-20102788201029702010299720103077201024872010260220103194201033030.070000.000100.001231includedK562AQR
MXETRMT2AENSG00000099899.10chr22-2010278820102970201031942010330320102487201026022010356020104135-0.101000.004940.069082includedK562HNRNPC
MXETRMT2AENSG00000099899.10chr22-20102788201029702010299720103077201024872010260220103194201033030.118000.000030.001651includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRMT2A is not avaliable on ENCORE database.