TCEB2

General Information

Gene Name       : TCEB2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TCEB2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TCEB2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TCEB2 RNA is bound by 9 proteins.  







eCLIP assay for TCEB2 is not avaliable on ENCORE database.





9 proteins are bound to TCEB2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1628215792821653-3'-UTR,CDS,intron-Distal3.567923.77931K562UPF1
chr1628220112822090-3'-UTR,CDS,intron-Distal3.026215.14064K562METAP2
chr1628219852822096-3'-UTR,CDS,intron-Distal,intron-Proximal3.293869.78571HepG2LARP4
chr1628218662821949-3'-UTR,intron-Distal,intron-Proximal,polyA_site5.607856.66343K562FMR1
chr1628220262822071-3'-UTR,CDS,intron-Distal4.0079850.00924K562YBX3
chr1628219622821990-3'-UTR,intron-Distal,intron-Proximal3.979386.14390K562PABPC4
chr1628270452827120-5'-UTR,CDS,intron-Distal3.597389.94107K562PABPC4
chr1628271042827130-5'-UTR,CDS,intron-Distal,intron-Proximal3.191497.57419K562DDX3X
chr1628271042827159-5'-UTR,CDS,intron-Distal,intron-Proximal4.190234.38588HepG2DDX3X
chr1628254972825558-CDS,intron-Distal,intron-Proximal5.130018.10821K562RPS3
chr1628254512825476-CDS,intron-Distal,intron-Proximal4.2392538.49224K562YBX3
chr1628220982822103-CDS,intron-Distal3.6465613.93957K562YBX3
chr1628270192827070-CDS,intron-Distal3.0869122.23579K562YBX3
chr1628220862822096-CDS,intron-Distal4.1700231.00448K562YBX3
chr1628255022825558-CDS,intron-Distal,intron-Proximal3.372836.07797HepG2LARP4
chr1628220712822084-CDS,intron-Distal4.3996034.15411K562YBX3
chr1628254892825556-CDS,intron-Distal3.715839.81562K562PABPC4
chr1628254972825504-CDS,intron-Distal4.1938629.25640K562YBX3
chr1628255042825545-CDS,intron-Distal3.1032117.16035K562YBX3
chr1628269432827003-CDS,intron-Distal,intron-Proximal3.132104.78164HepG2PRPF8
chr1628254762825497-CDS,intron-Distal4.3823236.28467K562YBX3
chr1628269972827045-CDS,intron-Distal4.4062111.88113K562PABPC4
chr1628270912827104-CDS,intron-Distal3.093576.03957K562DDX3X
chr1628269912827020-CDS,intron-Distal,intron-Proximal5.214978.10698K562RPS3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TCEB2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TCEB2 is not available on ENCORE database.

  • 96 RBPs can affect the levels of TCEB2.  








The Knockdown/knockout RNA-Seq assay for TCEB2 is not available on ENCORE database.





96 RBPs can affect the gene expression of TCEB2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TCEB2ENSG00000103363.10163.31830289.09920-0.823905.069003.66070HepG2AATF
TCEB2ENSG00000103363.10752.07390429.148300.809302.175501.34740HepG2BCCIP
TCEB2ENSG00000103363.10606.72410315.869400.9416010.176409.12300HepG2BOP1
TCEB2ENSG00000103363.10810.02260561.102900.529607.337306.35020HepG2CKAP4
TCEB2ENSG00000103363.10345.45390211.693700.706405.520504.08330HepG2YBX3
TCEB2ENSG00000103363.10486.61390264.939200.877006.844705.26780HepG2CSTF2
TCEB2ENSG00000103363.10157.45820296.12090-0.911203.260501.74610HepG2CSTF2T
TCEB2ENSG00000103363.10786.49000435.172800.8537013.8762012.65210HepG2CELF1
TCEB2ENSG00000103363.10582.60480467.920700.316202.430801.72980HepG2DAZAP1
TCEB2ENSG00000103363.10706.55710519.091500.444705.132604.04360HepG2DDX19B
TCEB2ENSG00000103363.10300.69420211.989400.504202.686701.54510HepG2DDX1
TCEB2ENSG00000103363.10199.53200312.08980-0.645303.814602.72910HepG2DDX24
TCEB2ENSG00000103363.10308.16340207.867800.567903.602902.80690HepG2DNAJC21
TCEB2ENSG00000103363.10409.47000206.031600.9908012.9309011.63070HepG2DNAJC2
TCEB2ENSG00000103363.10557.54360363.601000.616603.991202.90410HepG2EEF2
TCEB2ENSG00000103363.10181.61470293.65840-0.693303.395102.15880HepG2AGO1
TCEB2ENSG00000103363.10681.96240442.212300.624905.293504.18640HepG2EIF4G2
TCEB2ENSG00000103363.10402.20190669.86340-0.735907.720406.44530HepG2FUBP3
TCEB2ENSG00000103363.10407.99440233.429400.805503.225702.48370HepG2HNRNPC
TCEB2ENSG00000103363.10580.97110424.425900.452903.788402.96170HepG2HNRNPF
TCEB2ENSG00000103363.10757.60710426.240900.8297013.7839012.38880HepG2HNRNPL
TCEB2ENSG00000103363.10489.50520231.886101.077809.190508.13500HepG2HNRNPU
TCEB2ENSG00000103363.10351.93390236.864000.571104.645503.71560HepG2ILF2
TCEB2ENSG00000103363.10854.40670600.763000.508002.259601.51670HepG2LARP4
TCEB2ENSG00000103363.10776.29480463.989000.742402.637901.89370HepG2NOL12
TCEB2ENSG00000103363.10301.59490186.149700.696002.978701.47250HepG2NOLC1
TCEB2ENSG00000103363.10495.31770861.52880-0.798502.512301.82150HepG2PABPC4
TCEB2ENSG00000103363.10337.12740229.527800.554502.605401.77990HepG2PARN
TCEB2ENSG00000103363.10374.83270206.823900.857708.055406.84710HepG2PPIL4
TCEB2ENSG00000103363.10571.55570841.98690-0.558906.564805.79220HepG2PTBP1
TCEB2ENSG00000103363.101021.72720442.917301.2058022.1021020.63370HepG2PUF60
TCEB2ENSG00000103363.10878.22460470.175200.9013020.2314018.92490HepG2PUM1
TCEB2ENSG00000103363.10799.32950469.832400.766509.274908.08240HepG2PUM2
TCEB2ENSG00000103363.10679.20480911.79720-0.424903.184202.52130HepG2QKI
TCEB2ENSG00000103363.101304.372901037.906900.329602.827102.30470HepG2RBM22
TCEB2ENSG00000103363.10562.00920827.55060-0.558305.326404.42000HepG2RBM25
TCEB2ENSG00000103363.10657.19190872.76800-0.409304.076903.34680HepG2RECQL
TCEB2ENSG00000103363.10426.57020287.207900.570603.703303.00210HepG2RPS19
TCEB2ENSG00000103363.10652.46210344.636700.920702.344801.60420HepG2RPS2
TCEB2ENSG00000103363.10453.69950206.505001.1355016.2134014.84750HepG2SAFB2
TCEB2ENSG00000103363.10879.00590471.721000.897802.421301.79200HepG2SF3A3
TCEB2ENSG00000103363.10735.46720876.53680-0.253201.831101.33350HepG2SF3B4
TCEB2ENSG00000103363.10759.74790424.686500.8390015.0529013.65100HepG2SLBP
TCEB2ENSG00000103363.10541.08830240.819901.1678020.0199018.53360HepG2SMN1
TCEB2ENSG00000103363.10570.55080914.94740-0.6813010.041509.26610HepG2SRSF1
TCEB2ENSG00000103363.10855.05870437.315100.9673018.8785017.44890HepG2SRSF5
TCEB2ENSG00000103363.10533.52660416.997300.355402.276301.64010HepG2SRSF7
TCEB2ENSG00000103363.10539.93810744.38660-0.463305.089204.38190HepG2SRSF9
TCEB2ENSG00000103363.10890.78760497.348800.8407016.1877014.88370HepG2SUCLG1
TCEB2ENSG00000103363.10266.74610822.48120-1.6245022.8819021.48960HepG2TAF15
TCEB2ENSG00000103363.10505.84310755.65180-0.579005.951904.73400HepG2TIA1
TCEB2ENSG00000103363.10489.59130225.321501.1195012.0322011.11790HepG2TIAL1
TCEB2ENSG00000103363.10563.49390227.334801.3095017.0106015.77190HepG2TRIM56
TCEB2ENSG00000103363.10937.75990432.709801.1157010.888808.96390HepG2TUFM
TCEB2ENSG00000103363.10736.30640458.015400.684804.890903.75670HepG2UBE2L3
TCEB2ENSG00000103363.10501.01530248.055901.014104.848303.83790HepG2UCHL5
TCEB2ENSG00000103363.10531.35800418.344300.344902.567901.89150HepG2UPF1
TCEB2ENSG00000103363.10592.61390403.895200.553004.168703.45750HepG2UTP3
TCEB2ENSG00000103363.10736.23450413.453600.832305.146704.16620HepG2XRN2
TCEB2ENSG00000103363.10598.68070460.098800.379703.499702.90500HepG2ZNF622
TCEB2ENSG00000103363.102202.553501193.702400.8836029.1110027.36880K562AGGF1
TCEB2ENSG00000103363.102020.105301311.779500.622802.894901.88330K562AKAP8
TCEB2ENSG00000103363.102056.679401242.121400.727405.076304.18030K562AKAP8L
TCEB2ENSG00000103363.101629.830201303.322000.322403.026702.07260K562ATP5C1
TCEB2ENSG00000103363.101802.024701426.475000.337103.792402.38330K562CCDC124
TCEB2ENSG00000103363.10813.28020593.157800.455203.978002.67960K562CSTF2
TCEB2ENSG00000103363.102026.782202461.31230-0.280202.441201.52670K562CELF1
TCEB2ENSG00000103363.10934.66740685.350900.447504.332102.65820K562DDX27
TCEB2ENSG00000103363.101468.347501081.946500.440506.709305.75910K562DDX47
TCEB2ENSG00000103363.101627.348701336.486500.284002.217501.44440K562DKC1
TCEB2ENSG00000103363.101111.89660529.366701.070604.241702.62380K562EEF2
TCEB2ENSG00000103363.101028.11200511.258901.007806.202104.78880K562EFTUD2
TCEB2ENSG00000103363.10534.21840307.448800.797007.964606.62120K562EIF3G
TCEB2ENSG00000103363.101208.21980713.398400.760003.552801.36180K562EIF3H
TCEB2ENSG00000103363.101057.53410802.786200.397503.802402.25280K562EWSR1
TCEB2ENSG00000103363.101151.07280631.358600.866308.509706.93030K562FIP1L1
TCEB2ENSG00000103363.1013.85680139.95570-3.3363020.4485018.00280K562G3BP2
TCEB2ENSG00000103363.102697.875301693.962900.671306.057004.93290K562GRSF1
TCEB2ENSG00000103363.101436.83760939.294000.613102.592601.42400K562HNRNPA2B1
TCEB2ENSG00000103363.10856.66180519.371100.721906.638105.09910K562HNRNPM
TCEB2ENSG00000103363.101176.19450855.890600.458503.243802.38440K562HSPD1
TCEB2ENSG00000103363.10808.50390546.546100.564803.120901.83640K562IGF2BP3
TCEB2ENSG00000103363.10469.54600869.34990-0.888705.524103.47420K562ILF2
TCEB2ENSG00000103363.101902.176401318.131300.529107.361805.85450K562KIF1C
TCEB2ENSG00000103363.10308.95700439.89210-0.509702.393801.53420K562KRR1
TCEB2ENSG00000103363.10755.43780564.493200.420303.238002.32180K562MAGOH
TCEB2ENSG00000103363.101855.913901261.832700.556507.231505.16680K562MAK16
TCEB2ENSG00000103363.10863.45900563.288300.616204.183903.03090K562MATR3
TCEB2ENSG00000103363.101026.86930504.637201.024804.143802.48240K562NONO
TCEB2ENSG00000103363.101724.14140821.676401.069106.929705.13980K562PABPN1
TCEB2ENSG00000103363.101356.20720716.817400.919809.836708.02000K562PPIG
TCEB2ENSG00000103363.101648.11530976.940900.754403.361101.69290K562PPP1R8
TCEB2ENSG00000103363.101179.26180497.522901.244904.681503.70760K562PRPF8
TCEB2ENSG00000103363.10717.65790548.469800.387803.004902.31610K562PTBP1
TCEB2ENSG00000103363.101865.119802323.00590-0.316702.836001.75420K562PUM1
TCEB2ENSG00000103363.102260.781001231.701000.8761011.2876010.23980K562PUS1
TCEB2ENSG00000103363.10274.54330156.527200.810505.658203.02180K562QKI
TCEB2ENSG00000103363.101949.938601200.225200.7000012.9510011.66640K562RBM15
TCEB2ENSG00000103363.101148.80340506.521901.181305.339804.20160K562RPS19
TCEB2ENSG00000103363.10667.28840382.375200.803206.777805.12460K562RPS3
TCEB2ENSG00000103363.10271.04990145.446000.898006.765705.39160K562SF3B4
TCEB2ENSG00000103363.10983.95250537.727400.871604.411603.52380K562SRSF1
TCEB2ENSG00000103363.10586.78500369.089400.668805.603204.00130K562SRSF4
TCEB2ENSG00000103363.10945.59180507.952000.896403.458902.26320K562SRSF5
TCEB2ENSG00000103363.1041.91220137.37610-1.712707.355304.44260K562TAF15
TCEB2ENSG00000103363.10958.02630544.120200.816008.187506.88810K562TARDBP
TCEB2ENSG00000103363.101009.65070524.890300.943706.872105.49230K562TIA1
TCEB2ENSG00000103363.101029.66870515.298300.998605.634603.94940K562TRA2A
TCEB2ENSG00000103363.1060.02420140.04380-1.222306.240005.04100K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TCEB2 is not available on ENCORE database.





12 RBPs can affect the splicing of TCEB2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETCEB2ENSG00000103363.10chr16-2825451282562628219412822103282699328271280.114000.004080.06442includedK562SRSF1
SETCEB2ENSG00000103363.10chr16-282545128255572821414282210328269932827128-0.152000.000100.00315excludedK562SF3B4
SETCEB2ENSG00000103363.10chr16-282545128256262821941282210328269932827128-0.075000.000080.00428excludedK562AKAP8L
SETCEB2ENSG00000103363.10chr16-282545128255572821414282210328269932827128-0.115000.000000.00000excludedHepG2HNRNPK
SETCEB2ENSG00000103363.10chr16-2825451282562628219412822103282699328271280.152000.000220.00393includedHepG2U2AF2
SETCEB2ENSG00000103363.10chr16-282545128256262821941282210328269932827128-0.055000.007480.06455excludedK562AQR
SETCEB2ENSG00000103363.10chr16-282545128256262821941282210328269932827128-0.058000.001580.02486excludedK562PUS1
SETCEB2ENSG00000103363.10chr16-2825451282555728214142822103282699328271280.059000.000100.00810includedHepG2SFPQ
SETCEB2ENSG00000103363.10chr16-2825451282555728214142822103282699328271280.053000.000780.08168includedHepG2HNRNPUL1
SETCEB2ENSG00000103363.10chr16-2825451282562628219412822103282699328271280.112000.002750.08103includedK562TARDBP
SETCEB2ENSG00000103363.10chr16-282545128255572821414282210328269932827128-0.089000.000020.00199excludedK562HNRNPK
A3SSTCEB2ENSG00000103363.10chr16-2821994282218328219942822103282545128256870.202000.000000.00000longerK562AQR
A3SSTCEB2ENSG00000103363.10chr16-2821994282216128219942822123282545128256260.436000.000510.02796longerK562PUS1
RITCEB2ENSG00000103363.10chr16-2821414282210328214142821605282199428221030.136000.010220.07884includedK562AKAP8L
RITCEB2ENSG00000103363.10chr16-282141428221032821414282160528219942822103-0.251000.001820.06648excludedK562SUPV3L1
RITCEB2ENSG00000103363.10chr16-282141428221032821414282160528219942822103-0.251000.000100.01926excludedK562HNRNPL
RITCEB2ENSG00000103363.10chr16-2821414282210328214142821605282199428221030.104000.003530.02097includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TCEB2 is not avaliable on ENCORE database.