SCG3

General Information

Gene Name       : SCG3
Gene ID             : ENSG00000104112.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SCG3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SCG3ENSG00000104112.80.000.020.01ENCSR000AEF
HepG2SCG3ENSG00000104112.80.000.000.00ENCSR985KAT
K562SCG3ENSG00000104112.816.8119.1517.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SCG3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SCG3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SCG3 is not avaliable on ENCORE database.






NO known proteins are bound to SCG3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SCG3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SCG3 is not available on ENCORE database.

  • 137 RBPs can affect the levels of SCG3.  








The Knockdown/knockout RNA-Seq assay for SCG3 is not available on ENCORE database.





137 RBPs can affect the gene expression of SCG3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SCG3ENSG00000104112.448.809600.0000099999.999907.711506.87070HepG2AKAP1
SCG3ENSG00000104112.433.786600.992905.088507.490006.09540HepG2BCLAF1
SCG3ENSG00000104112.4205.720500.544108.5626062.3650060.19730HepG2CKAP4
SCG3ENSG00000104112.415.044100.0000099999.999904.264602.44120HepG2CSTF2T
SCG3ENSG00000104112.47.291600.0000099999.999901.823101.30410HepG2DDX3X
SCG3ENSG00000104112.418.297101.120604.029203.369702.52640HepG2DDX55
SCG3ENSG00000104112.439.607600.509106.2817010.081108.28980HepG2DDX59
SCG3ENSG00000104112.49.705200.0000099999.999902.751602.15990HepG2EIF2S1
SCG3ENSG00000104112.479.815500.294408.0828024.9966022.78470HepG2EIF4G2
SCG3ENSG00000104112.420.040700.531905.235505.217304.07140HepG2EWSR1
SCG3ENSG00000104112.4368.022400.0000099999.9999096.5163093.05680HepG2FASTKD2
SCG3ENSG00000104112.418.067700.0000099999.999904.725303.91820HepG2MATR3
SCG3ENSG00000104112.47.218800.0000099999.999901.859101.33330HepG2NCBP2
SCG3ENSG00000104112.444.889301.417004.9854011.136608.11490HepG2PHF6
SCG3ENSG00000104112.4122.696401.550406.3063029.8181026.56040HepG2PRPF6
SCG3ENSG00000104112.483.410800.869406.5840020.2678018.38210HepG2PRPF8
SCG3ENSG00000104112.412.487902.297202.442501.829801.39690HepG2SRFBP1
SCG3ENSG00000104112.421.337400.516505.368404.897403.53310HepG2SRSF3
SCG3ENSG00000104112.419.074900.611204.963904.780803.14600HepG2SSRP1
SCG3ENSG00000104112.415.681900.0000099999.999904.389302.86180HepG2STAU1
SCG3ENSG00000104112.453.414300.455106.8748015.6171014.36660HepG2UTP3
SCG3ENSG00000104112.41133.84160506.255701.1632016.0440013.32430K562AARS
SCG3ENSG00000104112.41956.60130726.087401.4300033.6651030.10300K562ABCF1
SCG3ENSG00000104112.4897.41810579.668100.630509.293108.33090K562AGGF1
SCG3ENSG00000104112.4395.72370591.53250-0.580006.149903.86310K562AKAP1
SCG3ENSG00000104112.41527.47900636.987201.2617028.2863024.88820K562AKAP8
SCG3ENSG00000104112.42201.24140603.175701.8676063.0361059.24000K562AKAP8L
SCG3ENSG00000104112.4574.01810748.08880-0.382102.680701.45960K562APOBEC3C
SCG3ENSG00000104112.4421.58910851.34840-1.0139012.7852011.65660K562AQR
SCG3ENSG00000104112.4773.54730578.032800.420204.556301.86810K562ASCC1
SCG3ENSG00000104112.41455.26320517.688501.4910049.3478045.57460K562BCCIP
SCG3ENSG00000104112.4679.57770500.233400.441904.330203.11300K562BCLAF1
SCG3ENSG00000104112.4268.95670522.81410-0.958905.786804.51140K562BOP1
SCG3ENSG00000104112.4304.81130193.455000.655803.620902.37930K562CCAR1
SCG3ENSG00000104112.42242.01380692.719601.6944064.8209060.89380K562CCDC124
SCG3ENSG00000104112.4344.32060500.83050-0.540604.517002.58050K562CEBPZ
SCG3ENSG00000104112.41768.726401154.173200.615805.740803.93110K562CIRBP
SCG3ENSG00000104112.41279.73480843.196200.601803.707601.99310K562CKAP4
SCG3ENSG00000104112.41375.68700699.248000.976207.624605.81190K562CNOT7
SCG3ENSG00000104112.42538.70470640.731501.9862045.6371041.93140K562CPEB4
SCG3ENSG00000104112.4267.13190555.90960-1.0573013.0554011.34250K562CPSF6
SCG3ENSG00000104112.4413.95830211.312500.970004.729702.34290K562YBX3
SCG3ENSG00000104112.4559.97370379.501400.561204.514703.11890K562CSTF2
SCG3ENSG00000104112.4991.74780680.109700.544105.248803.19220K562DDX19B
SCG3ENSG00000104112.4488.97580203.827501.262309.755606.48730K562DDX1
SCG3ENSG00000104112.4421.22880575.66720-0.450603.841902.40620K562DDX21
SCG3ENSG00000104112.4956.51850438.678401.1245027.1106023.78700K562DDX27
SCG3ENSG00000104112.41272.33870599.387601.085808.078806.21400K562DDX3X
SCG3ENSG00000104112.41125.44410506.070001.1530010.876507.93230K562DDX51
SCG3ENSG00000104112.4959.04110478.033201.004409.224805.69750K562DDX52
SCG3ENSG00000104112.41351.48460467.954501.530007.485804.17050K562DDX55
SCG3ENSG00000104112.41298.52960649.030201.0004024.2864021.32020K562DKC1
SCG3ENSG00000104112.4485.87450208.035701.2237013.7068011.10870K562DNAJC21
SCG3ENSG00000104112.41576.15570468.581901.7499043.6764039.98520K562EFTUD2
SCG3ENSG00000104112.41351.03180477.794001.4995016.4059012.04090K562AGO1
SCG3ENSG00000104112.4913.57870658.395000.472505.754603.98390K562EIF2S1
SCG3ENSG00000104112.4691.97520568.911600.282402.003101.37420K562EIF2S2
SCG3ENSG00000104112.41302.71230847.818500.619609.939908.19460K562EIF4G2
SCG3ENSG00000104112.4415.70510546.63030-0.395002.617001.36500K562EWSR1
SCG3ENSG00000104112.4345.61090693.52050-1.0048014.4035011.60680K562EXOSC5
SCG3ENSG00000104112.41974.06630417.105502.242609.605306.74220K562FAM120A
SCG3ENSG00000104112.42594.29940520.157302.3182027.5910023.99760K562FASTKD2
SCG3ENSG00000104112.4285.07700521.94200-0.872508.394406.82800K562FIP1L1
SCG3ENSG00000104112.4789.85800481.079800.715206.447004.59500K562FKBP4
SCG3ENSG00000104112.4789.39150565.609000.480803.528902.55860K562FMR1
SCG3ENSG00000104112.4872.61830479.397700.864008.585306.87780K562FTO
SCG3ENSG00000104112.4926.89450429.783601.1087010.339607.60450K562FUS
SCG3ENSG00000104112.4959.71800652.878100.555702.513801.84580K562G3BP2
SCG3ENSG00000104112.4766.92540469.782900.707006.333404.18030K562GEMIN5
SCG3ENSG00000104112.4796.18860533.233600.578206.759405.02100K562GLRX3
SCG3ENSG00000104112.4669.87430530.763400.335702.004501.32550K562GPKOW
SCG3ENSG00000104112.42490.72770758.146201.7159057.8895054.53870K562GRSF1
SCG3ENSG00000104112.4825.32160400.016801.044805.594803.62550K562HNRNPA2B1
SCG3ENSG00000104112.41098.38850729.827700.589707.104304.19530K562HNRNPH1
SCG3ENSG00000104112.41886.509801075.654000.8104011.166508.67480K562HNRNPK
SCG3ENSG00000104112.4989.89570429.307701.2052016.8079014.09980K562HNRNPM
SCG3ENSG00000104112.4568.10660831.71500-0.549906.314004.95300K562HNRNPU
SCG3ENSG00000104112.41710.01420638.526501.4211014.3675011.19180K562ILF2
SCG3ENSG00000104112.4349.26380202.102200.789104.899802.93020K562ILF3
SCG3ENSG00000104112.4424.58380195.350801.1199010.833908.05390K562KHDRBS1
SCG3ENSG00000104112.41759.53270976.639100.8492018.0514014.11010K562CCAR2
SCG3ENSG00000104112.4894.91280640.103400.483304.312803.25180K562KIF1C
SCG3ENSG00000104112.41012.84620453.188601.1601012.8940010.75090K562KRR1
SCG3ENSG00000104112.4719.63590536.503100.423602.957901.51570K562LARP7
SCG3ENSG00000104112.4946.09310561.809000.751807.670805.06350K562LIN28B
SCG3ENSG00000104112.4985.15180612.750100.684907.586105.46780K562MAK16
SCG3ENSG00000104112.4392.020101129.52410-1.5267034.0983030.99870K562MATR3
SCG3ENSG00000104112.41213.76670717.079800.759209.369407.49820K562MBNL1
SCG3ENSG00000104112.4380.06810518.08160-0.446902.804301.92170K562METAP2
SCG3ENSG00000104112.42748.07260903.678701.604407.825005.98400K562MSI2
SCG3ENSG00000104112.41227.59880560.622601.1306031.5414029.30910K562MTPAP
SCG3ENSG00000104112.4695.29790502.622500.468102.497001.66810K562NAA15
SCG3ENSG00000104112.42198.11870625.307701.8135070.8375066.47180K562NCBP2
SCG3ENSG00000104112.41461.53820927.397700.656107.808505.30560K562NOL12
SCG3ENSG00000104112.4303.38100461.66250-0.605703.815302.23520K562NONO
SCG3ENSG00000104112.4962.43260423.026601.185805.711202.16170K562NPM1
SCG3ENSG00000104112.4440.05910622.91870-0.501305.636904.62720K562NSUN2
SCG3ENSG00000104112.41518.17940671.774701.176208.864606.65950K562PABPC1
SCG3ENSG00000104112.41266.51760690.098400.875907.826804.88790K562PABPC4
SCG3ENSG00000104112.41597.768901007.058700.665809.042607.24120K562PCBP2
SCG3ENSG00000104112.4353.90770882.15790-1.3177019.1530017.04780K562PCBP3
SCG3ENSG00000104112.4778.70930540.677400.526204.611702.71570K562PHF6
SCG3ENSG00000104112.41360.08680822.978900.724708.274505.50350K562PKM
SCG3ENSG00000104112.4642.25440871.16360-0.439803.543801.92580K562PNPT1
SCG3ENSG00000104112.4306.23320676.67190-1.1438015.9267014.08640K562POLR2G
SCG3ENSG00000104112.41013.68690592.511700.774609.290507.55180K562PPIG
SCG3ENSG00000104112.43219.46550575.755802.4832021.3912017.71900K562PRPF6
SCG3ENSG00000104112.41630.78250455.983701.8384046.4343043.58610K562PRPF8
SCG3ENSG00000104112.45726.461301099.544602.38060142.18050138.10740K562PTBP1
SCG3ENSG00000104112.42827.49800964.033201.5523070.2965066.64690K562PUM2
SCG3ENSG00000104112.44823.25320598.150503.0113084.4509081.39300K562PUS1
SCG3ENSG00000104112.41204.04340730.561200.7207011.743208.34010K562QKI
SCG3ENSG00000104112.41010.44730622.923200.697804.132102.33410K562RAVER1
SCG3ENSG00000104112.41195.33370582.836001.0362022.7636020.98860K562RBM15
SCG3ENSG00000104112.4493.97610718.93850-0.541404.591102.52260K562RBM17
SCG3ENSG00000104112.41508.23840619.251501.2842031.5787027.83230K562RBM25
SCG3ENSG00000104112.41839.24050430.333002.0955019.5178015.12830K562RBM39
SCG3ENSG00000104112.4334.20740453.12070-0.439202.612801.65240K562RCC2
SCG3ENSG00000104112.4969.74570464.483601.061909.618208.07860K562RPS19
SCG3ENSG00000104112.41390.34510319.839502.1199018.0993014.76420K562SF1
SCG3ENSG00000104112.4968.37480614.637000.655709.426007.98750K562SF3A3
SCG3ENSG00000104112.41377.52920504.751001.4483015.1155012.78550K562SF3B1
SCG3ENSG00000104112.4961.49730678.872400.502005.509204.27620K562SF3B4
SCG3ENSG00000104112.4145.36620389.83290-1.423206.494904.15620K562SFPQ
SCG3ENSG00000104112.4531.90610213.098901.3195016.5195013.72390K562SLBP
SCG3ENSG00000104112.41283.67330498.041301.3658020.2345016.42270K562SLTM
SCG3ENSG00000104112.41854.86310654.472101.5028020.2554016.34410K562SMN1
SCG3ENSG00000104112.4994.06270560.992300.825304.341601.80840K562SMNDC1
SCG3ENSG00000104112.4750.01690446.489300.748204.678602.44800K562SND1
SCG3ENSG00000104112.41095.72310367.408901.5763011.176108.17130K562SNRNP200
SCG3ENSG00000104112.42170.61580629.706701.7853069.3384066.25910K562SRPK2
SCG3ENSG00000104112.4301.43060513.77220-0.769309.009706.89900K562SRSF7
SCG3ENSG00000104112.4767.13110501.488400.613202.635201.39190K562SSB
SCG3ENSG00000104112.41936.87150626.350501.6286019.0721016.01860K562STAU1
SCG3ENSG00000104112.41691.07200623.422201.4396010.362607.43750K562STIP1
SCG3ENSG00000104112.41919.97550807.088601.2502036.5633033.05510K562SUCLG1
SCG3ENSG00000104112.41075.58530441.513701.2845019.2055016.55140K562SUPV3L1
SCG3ENSG00000104112.41026.48360640.876400.679503.505201.78120K562TAF15
SCG3ENSG00000104112.41725.23300680.524301.3420031.4429027.78460K562TBRG4
SCG3ENSG00000104112.4853.113101052.34530-0.302802.288401.55090K562TIA1
SCG3ENSG00000104112.4295.86560477.52750-0.690604.820903.55650K562TIAL1
SCG3ENSG00000104112.41158.41260610.549400.9239012.834209.81870K562TRIP6
SCG3ENSG00000104112.4397.51560602.65180-0.600303.598801.44070K562TUFM
SCG3ENSG00000104112.42741.206601042.999601.3940020.0785017.03260K562UBE2L3
SCG3ENSG00000104112.41692.10560467.276401.8564047.4044043.80650K562UCHL5
SCG3ENSG00000104112.41241.70350660.492600.9106022.0689020.28340K562UPF1
SCG3ENSG00000104112.4383.82690797.22460-1.0545017.0191013.64080K562UPF2
SCG3ENSG00000104112.41085.15300606.497000.839204.899303.01240K562UTP18
SCG3ENSG00000104112.41431.33640588.476001.2822020.9961018.22100K562UTP3
SCG3ENSG00000104112.4771.39690565.164800.448703.794702.76660K562WDR3
SCG3ENSG00000104112.41155.90610587.691000.9758026.0027023.84840K562WDR43
SCG3ENSG00000104112.43036.241201008.977401.5893056.3062052.19730K562WRN
SCG3ENSG00000104112.42342.16090373.761202.6476031.6767027.59410K562XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SCG3 is not available on ENCORE database.





4 RBPs can affect the splicing of SCG3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESCG3ENSG00000104112.4chr15+519804565198059951975415519756315198141551981565-0.057000.005250.07680excludedK562SF3B4
SESCG3ENSG00000104112.4chr15+519747135197476651973549519740345197527551975321-0.147000.000040.00146excludedK562SF3B4
SESCG3ENSG00000104112.4chr15+519804565198059951975415519756315198141551981565-0.061000.001590.01807excludedK562AQR
SESCG3ENSG00000104112.4chr15+519747135197476651973549519740345197527551975321-0.083000.006030.05428excludedK562AQR
SESCG3ENSG00000104112.4chr15+519747135197476651973549519740345197527551975321-0.179000.000180.00552excludedK562U2AF1
SESCG3ENSG00000104112.4chr15+519747135197476651973549519740345197527551975321-0.311000.000000.00000excludedK562U2AF2
A3SSSCG3ENSG00000104112.4chr15+5200551152005610520055295200561051993303519934410.116000.000000.00000longerK562AQR
MXESCG3ENSG00000104112.4chr15+51975275519753215197541551975631519736885197403451980456519805990.264000.000000.000001includedK562U2AF2
MXESCG3ENSG00000104112.4chr15+51975275519753215197541551975631519736885197403451980456519805990.144000.000760.015961includedK562SF3B4
MXESCG3ENSG00000104112.4chr15+51975415519756315198045651980599519736885197403451981415519815650.077000.000510.011541includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SCG3 is not avaliable on ENCORE database.