RP11-983P16.4

General Information

Gene Name : RP11-983P16.4
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-983P16.4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-983P16.4 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-983P16.4 RNA is bound by 5 proteins.

eCLIP assay for RP11-983P16.4 is not avaliable on ENCORE database.

5 proteins are bound to RP11-983P16.4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	53443769	53443858	-	intron-Distal	3.37651	3.87101	HepG2	NKRF
chr12	53441575	53441669	-	intron-Distal	5.55286	9.42984	HepG2	NKRF
chr12	53441242	53441337	-	intron-Distal	4.25855	3.56577	HepG2	XRN2
chr12	53446148	53446209	-	intron-Distal	3.22007	3.46130	HepG2	PRPF4
chr12	53439095	53439238	-	intron-Distal	3.95166	3.25631	HepG2	PRPF4
chr12	53439089	53439195	-	intron-Distal	4.66823	4.06667	K562	GTF2F1
chr12	53442530	53442599	-	intron-Distal	4.17724	3.06140	HepG2	NKRF
chr12	53440698	53440763	-	intron-Distal,intron-Proximal	3.63721	4.46513	HepG2	NKRF
chr12	53444242	53444303	-	intron-Distal	3.32512	3.23466	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-983P16.4 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-983P16.4 is not available on ENCORE database.
51 RBPs can affect the levels of RP11-983P16.4.

The Knockdown/knockout RNA-Seq assay for RP11-983P16.4 is not available on ENCORE database.

51 RBPs can affect the gene expression of RP11-983P16.4 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-983P16.4	ENSG00000257337.2	15.54310	52.37710	-1.75270	3.51640	2.92560	HepG2	AKAP1
RP11-983P16.4	ENSG00000257337.2	65.20460	20.99490	1.63480	4.06380	2.86970	HepG2	CCAR1
RP11-983P16.4	ENSG00000257337.2	14.79930	41.17200	-1.47610	2.40620	1.67990	HepG2	CIRBP
RP11-983P16.4	ENSG00000257337.2	61.49170	21.16850	1.53840	3.93620	3.12980	HepG2	CPSF6
RP11-983P16.4	ENSG00000257337.2	73.30590	28.60290	1.35770	3.76430	2.98450	HepG2	DDX21
RP11-983P16.4	ENSG00000257337.2	14.38940	50.16740	-1.80170	3.85800	3.13020	HepG2	DDX3X
RP11-983P16.4	ENSG00000257337.2	62.18330	31.25800	0.99220	2.20000	1.58450	HepG2	DKC1
RP11-983P16.4	ENSG00000257337.2	11.97180	31.91590	-1.41460	2.11420	1.38600	HepG2	EWSR1
RP11-983P16.4	ENSG00000257337.2	99.91460	42.85230	1.22120	4.14170	3.33700	HepG2	G3BP1
RP11-983P16.4	ENSG00000257337.2	109.00970	23.99750	2.18340	9.33190	8.20020	HepG2	GPKOW
RP11-983P16.4	ENSG00000257337.2	69.93960	38.84370	0.84830	2.16520	1.32870	HepG2	HNRNPA2B1
RP11-983P16.4	ENSG00000257337.2	66.54900	23.06430	1.52870	3.70340	2.91130	HepG2	HNRNPC
RP11-983P16.4	ENSG00000257337.2	73.34160	22.90110	1.67910	4.78510	3.98020	HepG2	HNRNPLL
RP11-983P16.4	ENSG00000257337.2	93.74200	43.55470	1.10580	3.29770	2.56660	HepG2	IGF2BP2
RP11-983P16.4	ENSG00000257337.2	88.63480	43.81550	1.01630	2.59160	1.62550	HepG2	KHSRP
RP11-983P16.4	ENSG00000257337.2	97.57590	46.47760	1.06990	2.93550	2.28810	HepG2	MATR3
RP11-983P16.4	ENSG00000257337.2	93.28200	41.90580	1.15430	4.30510	3.35320	HepG2	NOL12
RP11-983P16.4	ENSG00000257337.2	67.81280	20.30520	1.73960	4.64070	3.68020	HepG2	NSUN2
RP11-983P16.4	ENSG00000257337.2	74.49350	42.23050	0.81870	1.95500	1.41580	HepG2	QKI
RP11-983P16.4	ENSG00000257337.2	74.39980	43.40490	0.77730	1.79460	1.33870	HepG2	NELFE
RP11-983P16.4	ENSG00000257337.2	62.35790	26.10340	1.25620	2.45280	1.80290	HepG2	RPLP0
RP11-983P16.4	ENSG00000257337.2	55.51650	26.79350	1.05090	2.04570	1.35790	HepG2	RPS3A
RP11-983P16.4	ENSG00000257337.2	13.74690	38.75290	-1.49520	2.59740	1.94370	HepG2	SF3A3
RP11-983P16.4	ENSG00000257337.2	95.51210	34.48370	1.46970	6.52040	5.73680	HepG2	SRSF9
RP11-983P16.4	ENSG00000257337.2	121.21040	44.58470	1.44280	7.25870	6.50380	HepG2	SSB
RP11-983P16.4	ENSG00000257337.2	83.39760	25.14330	1.72970	4.76480	3.91380	HepG2	SUPV3L1
RP11-983P16.4	ENSG00000257337.2	73.87820	38.10790	0.95500	2.66300	2.11200	HepG2	TAF15
RP11-983P16.4	ENSG00000257337.2	72.73760	35.00110	1.05520	3.02780	2.15880	HepG2	TIA1
RP11-983P16.4	ENSG00000257337.2	46.55530	22.27300	1.06350	2.04300	1.59990	HepG2	TIAL1
RP11-983P16.4	ENSG00000257337.2	55.41080	22.39770	1.30670	3.06170	2.36270	HepG2	ZC3H8
RP11-983P16.4	ENSG00000257337.2	17.92410	37.79820	-1.07640	1.82890	1.35910	HepG2	ZNF622
RP11-983P16.4	ENSG00000257337.2	155.61610	96.76730	0.68530	2.83510	1.71260	K562	CPEB4
RP11-983P16.4	ENSG00000257337.2	87.37560	46.08960	0.92270	2.71560	1.68330	K562	DDX3X
RP11-983P16.4	ENSG00000257337.2	56.40440	100.09680	-0.82750	2.78960	2.13500	K562	DDX47
RP11-983P16.4	ENSG00000257337.2	96.16010	50.61710	0.92570	3.03300	1.75490	K562	EIF2S1
RP11-983P16.4	ENSG00000257337.2	29.92980	64.82080	-1.11490	2.49010	1.51510	K562	EIF3D
RP11-983P16.4	ENSG00000257337.2	88.04170	149.73090	-0.76610	2.83750	1.88720	K562	EIF4G2
RP11-983P16.4	ENSG00000257337.2	119.62780	60.69150	0.97890	3.40240	1.80080	K562	GEMIN5
RP11-983P16.4	ENSG00000257337.2	158.94080	95.99760	0.72730	2.56670	1.83670	K562	GRSF1
RP11-983P16.4	ENSG00000257337.2	152.90640	100.67990	0.60280	2.35150	1.36560	K562	HNRNPA1
RP11-983P16.4	ENSG00000257337.2	107.38690	55.96220	0.94020	2.98670	2.36990	K562	HNRNPC
RP11-983P16.4	ENSG00000257337.2	168.21990	90.46940	0.89470	4.41550	3.04570	K562	HNRNPL
RP11-983P16.4	ENSG00000257337.2	167.83580	77.00540	1.12390	6.39430	4.90910	K562	MATR3
RP11-983P16.4	ENSG00000257337.2	196.35430	79.16700	1.31040	9.29880	7.90570	K562	MTPAP
RP11-983P16.4	ENSG00000257337.2	152.03700	87.95250	0.78950	3.49430	2.66520	K562	NSUN2
RP11-983P16.4	ENSG00000257337.2	185.38070	83.46120	1.15120	5.65850	4.46280	K562	PCBP3
RP11-983P16.4	ENSG00000257337.2	113.48860	64.01610	0.82590	2.83980	2.02740	K562	POLR2G
RP11-983P16.4	ENSG00000257337.2	23.15440	58.90890	-1.34720	2.80010	2.04630	K562	PRPF8
RP11-983P16.4	ENSG00000257337.2	93.51580	50.17000	0.89830	2.53150	1.67250	K562	PSIP1
RP11-983P16.4	ENSG00000257337.2	156.62370	74.97860	1.06270	5.78210	4.85030	K562	PTBP1
RP11-983P16.4	ENSG00000257337.2	61.75470	103.99020	-0.75180	2.29960	1.75020	K562	RBM15
RP11-983P16.4	ENSG00000257337.2	142.48200	75.63660	0.91350	3.93650	2.60430	K562	NELFE
RP11-983P16.4	ENSG00000257337.2	33.45410	73.50950	-1.13570	3.10700	2.36130	K562	SRSF1
RP11-983P16.4	ENSG00000257337.2	220.09910	86.38070	1.34930	5.82330	3.49660	K562	STIP1
RP11-983P16.4	ENSG00000257337.2	89.77240	48.25870	0.89540	2.45490	1.57740	K562	TIAL1
RP11-983P16.4	ENSG00000257337.2	150.57450	93.25860	0.69110	2.88690	2.15290	K562	UPF1
RP11-983P16.4	ENSG00000257337.2	137.44040	79.79730	0.78430	3.10670	2.18090	K562	WDR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-983P16.4

General Information

Functions

Localization

Domains (AlphaFold: RP11-983P16.4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-983P16.4 is not avaliable on ENCORE database.

5 proteins are bound to RP11-983P16.4 RNA:

eCLIP assay for RP11-983P16.4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-983P16.4 is not available on ENCORE database.

51 RBPs can affect the gene expression of RP11-983P16.4 :

The Knockdown/knockout RNA-Seq assay for RP11-983P16.4 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-983P16.4 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-983P16.4 is not avaliable on ENCORE database.