RAD51AP1

General Information

Gene Name       : RAD51AP1
Gene ID             : ENSG00000111247.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RAD51AP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RAD51AP1ENSG00000111247.1443.8138.6041.20ENCSR000AEF
HepG2RAD51AP1ENSG00000111247.1420.5544.2932.42ENCSR985KAT
K562RAD51AP1ENSG00000111247.1458.9959.3459.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RAD51AP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RAD51AP1 RNA is bound by 13 proteins.  







eCLIP assay for RAD51AP1 is not avaliable on ENCORE database.





13 proteins are bound to RAD51AP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1246579084658001+3'-UTR,5'-UTR,CDS3.374765.02533K562GRWD1
chr1246622904662389+3'-UTR,CDS,intron-Distal,intron-Proximal5.149346.15361K562PRPF8
chr1246621704662244+3'-UTR,CDS3.422593.57857HepG2BCLAF1
chr1246579214658000+3'-UTR,5'-UTR,CDS4.4547313.77626K562ZNF622
chr1246682864668333+3'-UTR3.129414.56635K562KHSRP
chr1246621584662232+3'-UTR,CDS3.204158.48432K562ZNF622
chr1246622594662292+3'-UTR,CDS,intron-Proximal3.527134.20387K562ZNF622
chr1246578544657921+3'-UTR,5'-UTR,CDS3.523586.97987K562ZNF622
chr1246622324662329+3'-UTR,CDS,intron-Proximal4.2989813.05280K562UCHL5
chr1246622444662311+3'-UTR,CDS,intron-Proximal4.554104.78529HepG2BCLAF1
chr1246621544662232+3'-UTR,CDS3.774849.45155K562UCHL5
chr1246622324662308+3'-UTR,CDS,intron-Proximal3.113133.46619K562GRWD1
chr1246682374668295+3'-UTR3.168129.31973K562PUM2
chr1246530054653051+5'-UTR,CDS4.548044.43680K562ZNF622
chr1246529384652990+5'-UTR,CDS3.324664.62864K562ZNF622
chr1246480694648124+5'-UTR,CDS,intron-Proximal3.999908.84023K562ZNF622
chr1246529314653053+5'-UTR,CDS3.819343.31827HepG2GRWD1
chr1246529334653054+5'-UTR,CDS3.254914.84084K562ZNF800
chr1246480744648122+5'-UTR,CDS4.316315.89529K562PUM2
chr1246648744664988+intron-Distal3.282649.83251K562HNRNPL
chr1246648274664934+intron-Distal3.061823.18966K562MATR3
chr1246663884666522+intron-Distal4.383755.01208K562MATR3
chr1246648934665001+intron-Distal3.183955.63547HepG2HNRNPL
chr1246624024662435+intron-Distal,intron-Proximal4.941776.07567K562KHSRP
chr1246662144666320+intron-Distal5.3483710.58401HepG2QKI
chr1246623364662402+intron-Distal,intron-Proximal4.751039.41035K562KHSRP
chr1246647144664785+intron-Distal4.953149.22379K562HNRNPL
chr1246637354663838+intron-Distal3.414154.83972K562KHDRBS1
chr1246661594666208+intron-Distal4.478683.65740K562U2AF2
chr1246623394662502+intron-Distal,intron-Proximal4.078263.73609HepG2KHSRP
chr1246650824665151+intron-Distal3.410868.38378K562HNRNPL
chr1246662144666324+intron-Distal3.6851317.98234K562QKI
chr1246646974664772+intron-Distal4.280734.24565HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RAD51AP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RAD51AP1 is not available on ENCORE database.

  • 131 RBPs can affect the levels of RAD51AP1.  








The Knockdown/knockout RNA-Seq assay for RAD51AP1 is not available on ENCORE database.





131 RBPs can affect the gene expression of RAD51AP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RAD51AP1ENSG00000111247.10336.38880535.72760-0.671405.842005.02230HepG2ACO1
RAD51AP1ENSG00000111247.10271.32030376.75450-0.473602.513901.56180HepG2ADAR
RAD51AP1ENSG00000111247.10231.10220459.82170-0.992504.460603.80680HepG2AKAP1
RAD51AP1ENSG00000111247.1051.20050118.75960-1.213802.433001.45280HepG2AKAP8
RAD51AP1ENSG00000111247.10376.58430538.17130-0.515104.807603.82050HepG2AKAP8L
RAD51AP1ENSG00000111247.1088.24050380.48770-2.1083013.4678011.85320HepG2ASCC1
RAD51AP1ENSG00000111247.10382.98230771.11650-1.0097012.9547011.66480HepG2AUH
RAD51AP1ENSG00000111247.10324.16260556.69840-0.780203.459402.41300HepG2BCCIP
RAD51AP1ENSG00000111247.10267.47010483.80840-0.855104.163903.08160HepG2BCLAF1
RAD51AP1ENSG00000111247.1022.06400273.00250-3.6291040.7780038.98200HepG2BOP1
RAD51AP1ENSG00000111247.10198.63120400.19490-1.010609.405508.10720HepG2CALR
RAD51AP1ENSG00000111247.10192.83520361.48180-0.906604.816303.81010HepG2CIRBP
RAD51AP1ENSG00000111247.10186.07120535.52310-1.5251030.9135029.23580HepG2CKAP4
RAD51AP1ENSG00000111247.1060.39660144.83700-1.261903.868802.95800HepG2CNOT7
RAD51AP1ENSG00000111247.1099.58710250.63370-1.331509.114207.93460HepG2CPSF6
RAD51AP1ENSG00000111247.10284.91370789.98330-1.4713033.5528031.81700HepG2CELF1
RAD51AP1ENSG00000111247.10179.92090468.93240-1.382006.640905.63980HepG2DDX21
RAD51AP1ENSG00000111247.10101.47730440.52560-2.1181013.8709012.57580HepG2DDX3X
RAD51AP1ENSG00000111247.10196.17730547.30800-1.480209.258307.93980HepG2DDX55
RAD51AP1ENSG00000111247.10154.58690284.61210-0.880603.665402.54330HepG2DDX59
RAD51AP1ENSG00000111247.1071.26380378.30010-2.4083015.7286014.41690HepG2DDX6
RAD51AP1ENSG00000111247.10218.12270379.39110-0.798507.233506.14010HepG2DNAJC21
RAD51AP1ENSG00000111247.10229.73230376.00070-0.710806.868805.90670HepG2DNAJC2
RAD51AP1ENSG00000111247.10211.89500431.39960-1.025704.472103.05350HepG2AGO1
RAD51AP1ENSG00000111247.1023.08830363.78870-3.9779027.3404025.61290HepG2EIF2S1
RAD51AP1ENSG00000111247.10130.12730341.44530-1.3917011.8221010.10130HepG2EIF3D
RAD51AP1ENSG00000111247.10236.73540391.37780-0.725303.273202.52800HepG2EIF4B
RAD51AP1ENSG00000111247.10486.81650838.01350-0.7836012.6488011.11620HepG2EIF4G1
RAD51AP1ENSG00000111247.10557.21460802.76650-0.526704.368503.36040HepG2EIF4G2
RAD51AP1ENSG00000111247.10448.52820885.29480-0.9810018.4179017.09470HepG2ETF1
RAD51AP1ENSG00000111247.10238.83980126.458300.917303.932901.50260HepG2FASTKD1
RAD51AP1ENSG00000111247.10328.74520433.73610-0.399802.010301.34860HepG2FIP1L1
RAD51AP1ENSG00000111247.10122.23260251.05810-1.038403.376902.24960HepG2FTO
RAD51AP1ENSG00000111247.10667.30710405.513900.718506.008205.01530HepG2FXR1
RAD51AP1ENSG00000111247.10259.04970376.26580-0.538502.215801.61750HepG2G3BP1
RAD51AP1ENSG00000111247.10144.03580284.11960-0.980105.762304.86110HepG2GPKOW
RAD51AP1ENSG00000111247.10295.89510511.41310-0.789409.979308.27800HepG2HDGF
RAD51AP1ENSG00000111247.10178.49060383.02540-1.101609.436008.34680HepG2HNRNPA1
RAD51AP1ENSG00000111247.10493.46240780.65590-0.661709.067607.55840HepG2HNRNPA2B1
RAD51AP1ENSG00000111247.10273.62370426.03150-0.638804.192503.35220HepG2HNRNPC
RAD51AP1ENSG00000111247.10198.38100364.43970-0.877408.424107.26130HepG2HNRNPF
RAD51AP1ENSG00000111247.10418.94440773.78750-0.8852016.7682015.23370HepG2HNRNPL
RAD51AP1ENSG00000111247.1093.47650271.13990-1.5364011.8329010.64620HepG2HNRNPLL
RAD51AP1ENSG00000111247.10204.18160358.87010-0.813606.546405.47540HepG2IGF2BP1
RAD51AP1ENSG00000111247.1055.49670382.49870-2.7850018.4927016.92430HepG2IGF2BP2
RAD51AP1ENSG00000111247.10287.97930432.30330-0.586106.103505.05730HepG2ILF2
RAD51AP1ENSG00000111247.10249.01860138.039500.851104.466202.89860HepG2KHDRBS1
RAD51AP1ENSG00000111247.10273.99580560.49220-1.032507.766706.36340HepG2LARP4
RAD51AP1ENSG00000111247.10443.77820608.69350-0.455902.897601.73790HepG2LARP7
RAD51AP1ENSG00000111247.10671.78330405.654700.727604.348003.52850HepG2MAGOH
RAD51AP1ENSG00000111247.10150.87910357.36790-1.244006.332404.79210HepG2METAP2
RAD51AP1ENSG00000111247.10287.99810417.58640-0.536002.171301.60800HepG2NCBP2
RAD51AP1ENSG00000111247.10313.79950502.35850-0.678902.570101.52070HepG2NONO
RAD51AP1ENSG00000111247.1073.64430132.39050-0.846202.554201.70960HepG2PABPC1
RAD51AP1ENSG00000111247.10130.28750371.99430-1.513609.066407.77860HepG2PABPC4
RAD51AP1ENSG00000111247.10318.55840418.92800-0.395102.584801.76260HepG2PARN
RAD51AP1ENSG00000111247.10293.19190371.58320-0.341802.044901.51040HepG2PCBP1
RAD51AP1ENSG00000111247.10193.03840528.63630-1.4534014.0030011.93720HepG2PCBP2
RAD51AP1ENSG00000111247.10121.83490422.43250-1.7938011.6697010.17650HepG2PRPF8
RAD51AP1ENSG00000111247.10261.38370378.06760-0.532503.932803.30580HepG2PTBP1
RAD51AP1ENSG00000111247.10218.04400804.05150-1.8827039.9892038.05360HepG2PUF60
RAD51AP1ENSG00000111247.10278.32830853.52930-1.6167050.1737048.28880HepG2PUM1
RAD51AP1ENSG00000111247.10465.51840852.91010-0.8736012.8333011.45030HepG2PUM2
RAD51AP1ENSG00000111247.10321.18660545.66040-0.764609.935408.89040HepG2PUS1
RAD51AP1ENSG00000111247.10339.75070510.11170-0.586302.432901.76890HepG2RAVER1
RAD51AP1ENSG00000111247.10155.13610739.95310-2.2539036.9062035.43670HepG2RBM22
RAD51AP1ENSG00000111247.10495.93950733.96940-0.565603.816402.63820HepG2RBM27
RAD51AP1ENSG00000111247.10119.94380332.82170-1.472404.828302.56430HepG2RBM39
RAD51AP1ENSG00000111247.10276.30470139.897700.981805.459103.33880HepG2RBM47
RAD51AP1ENSG00000111247.10537.89040420.779700.354102.166601.67590HepG2NELFE
RAD51AP1ENSG00000111247.10706.06530391.850600.8494012.0447010.89590HepG2RECQL
RAD51AP1ENSG00000111247.1050.64420392.57630-2.9545044.4500042.50490HepG2RPLP0
RAD51AP1ENSG00000111247.10172.44050501.14840-1.5391014.5029012.53590HepG2RPS10
RAD51AP1ENSG00000111247.1062.95240332.22260-2.3998031.6753029.97840HepG2RPS19
RAD51AP1ENSG00000111247.10199.22160676.94260-1.7647028.5383026.22630HepG2RPS2
RAD51AP1ENSG00000111247.1061.00950145.46740-1.253605.549904.41120HepG2RPS3A
RAD51AP1ENSG00000111247.1093.82080417.89560-2.1552014.7009013.14160HepG2RRP9
RAD51AP1ENSG00000111247.10146.28590333.46680-1.1888010.013508.27000HepG2SERBP1
RAD51AP1ENSG00000111247.10256.26260437.16640-0.770604.753203.85470HepG2SF3A3
RAD51AP1ENSG00000111247.10176.20600268.37890-0.607002.878402.15820HepG2SF3B1
RAD51AP1ENSG00000111247.10601.49370770.94600-0.358103.596602.81330HepG2SLBP
RAD51AP1ENSG00000111247.10236.89970439.54270-0.8917011.1638010.00860HepG2SMN1
RAD51AP1ENSG00000111247.10272.86230520.30650-0.931207.131105.54160HepG2SMNDC1
RAD51AP1ENSG00000111247.10166.05040327.24030-0.978702.775601.46160HepG2SNRNP200
RAD51AP1ENSG00000111247.10114.40190298.61720-1.384207.211605.94430HepG2SNRNP70
RAD51AP1ENSG00000111247.10142.85990835.76830-2.5485072.0743070.41210HepG2SRFBP1
RAD51AP1ENSG00000111247.10951.96140410.887801.2121016.5081015.55870HepG2SRSF1
RAD51AP1ENSG00000111247.10387.20110793.87550-1.0358019.7102018.24560HepG2SRSF5
RAD51AP1ENSG00000111247.10133.15080358.04660-1.4271018.1170016.61710HepG2SRSF7
RAD51AP1ENSG00000111247.10164.54030334.25880-1.022506.255905.48580HepG2SRSF9
RAD51AP1ENSG00000111247.10584.09870725.67700-0.313102.245501.77270HepG2SSB
RAD51AP1ENSG00000111247.10170.67560289.56050-0.762604.492602.94990HepG2STAU1
RAD51AP1ENSG00000111247.10725.60630902.86220-0.315303.057302.40950HepG2SUCLG1
RAD51AP1ENSG00000111247.1053.36970130.51870-1.290202.633401.34240HepG2SUGP2
RAD51AP1ENSG00000111247.1081.34510544.90300-2.7439019.4531017.94110HepG2SUPV3L1
RAD51AP1ENSG00000111247.10648.35130369.256600.8121010.002009.04200HepG2TAF15
RAD51AP1ENSG00000111247.1071.50340264.25940-1.8859016.5047014.99050HepG2TARDBP
RAD51AP1ENSG00000111247.10138.06820365.26970-1.403606.961105.50300HepG2TFIP11
RAD51AP1ENSG00000111247.1079.63720411.28340-2.3686039.6675038.17790HepG2TIAL1
RAD51AP1ENSG00000111247.10164.52060414.90620-1.3345019.3565018.03660HepG2TRIM56
RAD51AP1ENSG00000111247.10568.48850785.51310-0.466503.911802.84970HepG2TUFM
RAD51AP1ENSG00000111247.10206.80470370.94200-0.842906.201805.27780HepG2U2AF1
RAD51AP1ENSG00000111247.1070.62020380.77180-2.4308010.984308.91380HepG2U2AF2
RAD51AP1ENSG00000111247.10452.82590831.44590-0.876707.823106.38610HepG2UBE2L3
RAD51AP1ENSG00000111247.10182.75610321.93620-0.816903.788202.90040HepG2UCHL5
RAD51AP1ENSG00000111247.10109.07880387.70000-1.8296028.4039026.64590HepG2UPF1
RAD51AP1ENSG00000111247.10222.15200398.49930-0.843008.267806.56730HepG2UTP18
RAD51AP1ENSG00000111247.10258.14900374.30870-0.536003.929003.23380HepG2UTP3
RAD51AP1ENSG00000111247.1027.14860426.39540-3.9732088.2800086.34760HepG2ZNF622
RAD51AP1ENSG00000111247.101177.653601443.46600-0.293602.078101.50930K562AKAP8L
RAD51AP1ENSG00000111247.101194.120001756.17240-0.556505.963005.15830K562AQR
RAD51AP1ENSG00000111247.10198.09980283.83520-0.518802.651801.62810K562CCAR1
RAD51AP1ENSG00000111247.101282.838001657.78990-0.369903.771302.36610K562CCDC124
RAD51AP1ENSG00000111247.10326.60810577.47930-0.822208.698707.29270K562CPSF6
RAD51AP1ENSG00000111247.10662.52700844.20540-0.349602.619701.60870K562DDX3X
RAD51AP1ENSG00000111247.10754.356501095.87000-0.538803.806403.05970K562DDX47
RAD51AP1ENSG00000111247.10217.50080317.72010-0.546702.969301.58810K562DHX30
RAD51AP1ENSG00000111247.10829.761301018.65420-0.295902.624201.91980K562EIF2S2
RAD51AP1ENSG00000111247.10801.076501011.35950-0.336303.342802.47220K562EIF3G
RAD51AP1ENSG00000111247.10661.32060882.00580-0.415402.371401.60970K562EIF4A3
RAD51AP1ENSG00000111247.10411.78770565.91300-0.458703.077601.73840K562EXOSC5
RAD51AP1ENSG00000111247.10830.14710630.812200.396102.948502.07180K562FIP1L1
RAD51AP1ENSG00000111247.10630.17600917.25230-0.541606.604905.72700K562FXR1
RAD51AP1ENSG00000111247.101493.195301148.642700.378403.508401.85720K562G3BP1
RAD51AP1ENSG00000111247.101819.944301087.875600.742304.041703.14700K562G3BP2
RAD51AP1ENSG00000111247.10876.36110713.040400.297402.427001.36500K562GLRX3
RAD51AP1ENSG00000111247.10316.72380551.35430-0.799807.507506.19740K562GPKOW
RAD51AP1ENSG00000111247.10844.367401357.47660-0.685009.498108.07120K562GRSF1
RAD51AP1ENSG00000111247.10671.53110990.45760-0.560604.048802.74280K562HNRNPL
RAD51AP1ENSG00000111247.10280.63190470.77810-0.746404.366403.16830K562KRR1
RAD51AP1ENSG00000111247.101010.710201260.13950-0.318202.670701.76490K562MATR3
RAD51AP1ENSG00000111247.102741.941102061.776100.411203.815202.04100K562NOL12
RAD51AP1ENSG00000111247.10868.062201123.50080-0.372103.041502.01570K562PCBP2
RAD51AP1ENSG00000111247.10723.80620552.176800.390403.013502.17660K562POLR2G
RAD51AP1ENSG00000111247.10747.063801226.74850-0.7155010.851109.59810K562PTBP1
RAD51AP1ENSG00000111247.101012.957402056.37230-1.0215021.2333018.87240K562PUF60
RAD51AP1ENSG00000111247.101757.315102143.08040-0.286302.336501.45280K562PUM2
RAD51AP1ENSG00000111247.10809.571901176.41510-0.539205.546204.30740K562RBM22
RAD51AP1ENSG00000111247.101381.488601032.671300.419704.359002.63480K562RBM25
RAD51AP1ENSG00000111247.10877.253001237.96300-0.496902.393001.39150K562NELFE
RAD51AP1ENSG00000111247.10452.66590627.06380-0.470202.792601.78580K562RPS3
RAD51AP1ENSG00000111247.10363.03440491.89860-0.438302.671001.61020K562SAFB
RAD51AP1ENSG00000111247.10735.089601131.97180-0.622804.715303.58780K562SF3B4
RAD51AP1ENSG00000111247.101072.13990842.117600.348303.808802.72950K562SRPK2
RAD51AP1ENSG00000111247.101521.598701202.599900.339303.157102.40610K562SRSF1
RAD51AP1ENSG00000111247.10451.85980605.36140-0.421902.777201.72310K562SRSF4
RAD51AP1ENSG00000111247.10835.851001217.15820-0.542205.198304.21140K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RAD51AP1 is not available on ENCORE database.





12 RBPs can affect the splicing of RAD51AP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERAD51AP1ENSG00000111247.10chr12+465547446555844652928465307046572574657344-0.372000.000660.00990excludedHepG2U2AF2
SERAD51AP1ENSG00000111247.10chr12+465547446555844652840465307046572574657344-0.103000.000200.00310excludedK562AQR
SERAD51AP1ENSG00000111247.10chr12+4665518466566846621484662313466802246691840.266000.001380.05063includedK562FXR1
SERAD51AP1ENSG00000111247.10chr12+466551846656684662148466231346680224669213-0.259000.000620.05018excludedK562SUPV3L1
SERAD51AP1ENSG00000111247.10chr12+465104946510994648048464812246529284653077-0.069000.000000.00000excludedK562PUS1
SERAD51AP1ENSG00000111247.10chr12+4654947465499846529284653070465547446555840.055000.004060.06936includedK562U2AF1
SERAD51AP1ENSG00000111247.10chr12+4665518466566846621484662313466802246692130.207000.000180.04501includedK562SBDS
SERAD51AP1ENSG00000111247.10chr12+4654947465499846529284653070465547446555840.135000.001070.09813includedHepG2SSB
SERAD51AP1ENSG00000111247.10chr12+4654947465499846529284653077465547446555840.396000.000070.00544includedK562HNRNPK
SERAD51AP1ENSG00000111247.10chr12+465547446555844652928465307046572574657344-0.230000.000100.00610excludedHepG2HNRNPC
SERAD51AP1ENSG00000111247.10chr12+4654384465447846529284653070465547446555840.067000.000480.07723includedK562EIF3G
SERAD51AP1ENSG00000111247.10chr12+465547446555844652928465307046572574657341-0.118000.002730.04343excludedK562HNRNPC
MXERAD51AP1ENSG00000111247.10chr12+465494746549984655474465558446543844654478465725746573440.062000.002230.060481includedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RAD51AP1 is not avaliable on ENCORE database.