PPP2R4

General Information

Gene Name       : PPP2R4
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPP2R4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPP2R4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPP2R4 RNA is bound by 25 proteins.  







eCLIP assay for PPP2R4 is not avaliable on ENCORE database.





25 proteins are bound to PPP2R4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9131910971131911030+3'-UTR6.8127928.47449HepG2AKAP1
chr9131910597131910624+3'-UTR7.2148074.53814K562UPF1
chr9131910277131910335+3'-UTR3.291736.51761HepG2FAM120A
chr9131909869131909930+3'-UTR3.1886012.19174K562FAM120A
chr9131910921131910962+3'-UTR5.4209419.90509HepG2UPF1
chr9131910844131910890+3'-UTR8.1979165.53231K562UPF1
chr9131910500131910524+3'-UTR6.3858438.79948K562UPF1
chr9131910890131910952+3'-UTR5.8831055.41036K562UPF1
chr9131909971131909995+3'-UTR3.707345.75623K562FAM120A
chr9131910688131910752+3'-UTR5.75469400.00000K562UPF1
chr9131909843131909924+3'-UTR5.9864428.38120HepG2UPF1
chr9131909956131910014+3'-UTR6.8705530.37563HepG2AKAP1
chr9131910054131910102+3'-UTR5.7943629.28990HepG2AKAP1
chr9131910165131910187+3'-UTR4.223774.03377HepG2LARP4
chr9131910331131910360+3'-UTR5.3285924.33939HepG2AKAP1
chr9131910612131910758+3'-UTR5.53733400.00000K562AKAP1
chr9131910277131910332+3'-UTR3.893026.02286HepG2PRPF4
chr9131910280131910332+3'-UTR3.835915.80574K562DDX6
chr9131910786131910868+3'-UTR6.7072538.28294K562AKAP1
chr9131909834131909921+3'-UTR3.574359.78821HepG2DDX55
chr9131911108131911180+3'-UTR6.6513929.56618HepG2AKAP1
chr9131910880131910959+3'-UTR3.016446.18107HepG2STAU2
chr9131910021131910054+3'-UTR6.4398223.96021HepG2UPF1
chr9131909835131909884+3'-UTR6.91314400.00000K562UPF1
chr9131910142131910215+3'-UTR5.4012034.28004HepG2AKAP1
chr9131910284131910333+3'-UTR5.6595272.51395K562UPF1
chr9131910281131910331+3'-UTR4.9323217.86930K562FAM120A
chr9131910022131910090+3'-UTR4.167675.75263HepG2LARP4
chr9131910397131910459+3'-UTR3.754747.43667HepG2LARP4
chr9131910014131910054+3'-UTR5.5742121.95740HepG2AKAP1
chr9131910784131910844+3'-UTR6.60948400.00000K562UPF1
chr9131910547131910612+3'-UTR5.2920334.77853K562AKAP1
chr9131910787131910839+3'-UTR4.5929923.11638HepG2AKAP1
chr9131910460131910517+3'-UTR5.414368.30094K562DGCR8
chr9131910409131910460+3'-UTR6.4341882.90515K562UPF1
chr9131910913131910971+3'-UTR5.9434430.39305HepG2AKAP1
chr9131905098131905149+3'-UTR,CDS,intron-Distal4.149323.97974HepG2RBFOX2
chr9131910624131910652+3'-UTR5.8884458.23217K562UPF1
chr9131910296131910376+3'-UTR4.647609.97474K562PCBP1
chr9131910715131910770+3'-UTR3.152786.62784K562PABPC4
chr9131910794131910842+3'-UTR6.8876831.38781HepG2UPF1
chr9131910539131910588+3'-UTR3.892295.47244HepG2LARP4
chr9131910333131910409+3'-UTR6.66915400.00000K562UPF1
chr9131909954131910008+3'-UTR4.082705.75263HepG2LARP4
chr9131910280131910337+3'-UTR3.152423.50249K562DROSHA
chr9131911001131911014+3'-UTR7.4261537.00438K562UPF1
chr9131910540131910597+3'-UTR6.5241382.90515K562UPF1
chr9131910620131910747+3'-UTR7.4153390.77002HepG2AKAP1
chr9131910331131910396+3'-UTR3.8160719.43280K562FAM120A
chr9131910056131910108+3'-UTR6.6213825.23263HepG2UPF1
chr9131910568131910659+3'-UTR4.2875715.14721K562FAM120A
chr9131911069131911157+3'-UTR4.7306030.72175K562AKAP1
chr9131910015131910110+3'-UTR6.46120400.00000K562UPF1
chr9131910284131910331+3'-UTR4.9102425.95831HepG2AKAP1
chr9131911091131911148+3'-UTR4.5702022.73064HepG2UPF1
chr9131909832131909920+3'-UTR4.9933515.30399HepG2LARP4
chr9131909884131909946+3'-UTR7.11037400.00000K562UPF1
chr9131909798131909911+3'-UTR3.016316.15884HepG2PCBP2
chr9131910652131910688+3'-UTR5.2567557.38234K562UPF1
chr9131909784131909884+3'-UTR5.800278.61309K562PCBP1
chr9131909847131909906+3'-UTR4.6860427.25422K562AKAP1
chr9131910626131910747+3'-UTR6.2836763.80521HepG2UPF1
chr9131910365131910398+3'-UTR5.3546026.77405HepG2AKAP1
chr9131910963131911039+3'-UTR4.053148.69967HepG2STAU2
chr9131909948131910015+3'-UTR6.23581400.00000K562UPF1
chr9131910333131910397+3'-UTR4.7664036.82609K562AKAP1
chr9131910970131911069+3'-UTR6.6667957.55020K562AKAP1
chr9131910354131910400+3'-UTR5.6663624.23015HepG2UPF1
chr9131910542131910599+3'-UTR4.8210916.33470HepG2UPF1
chr9131910842131910864+3'-UTR5.2390818.32365HepG2UPF1
chr9131910284131910333+3'-UTR5.9907735.13705K562AKAP1
chr9131910053131910098+3'-UTR3.617058.10650K562FAM120A
chr9131910334131910354+3'-UTR4.9750523.27894HepG2UPF1
chr9131911021131911067+3'-UTR7.1074363.82650K562UPF1
chr9131909844131909927+3'-UTR5.5328635.63546HepG2AKAP1
chr9131911101131911142+3'-UTR5.3911441.87661K562UPF1
chr9131910910131910970+3'-UTR6.8796641.88677K562AKAP1
chr9131910962131911045+3'-UTR5.8042745.64029HepG2UPF1
chr9131909851131909924+3'-UTR5.6000422.01857K562PABPC4
chr9131910543131910585+3'-UTR6.0853617.21627HepG2AKAP1
chr9131910398131910462+3'-UTR5.0482432.56461HepG2AKAP1
chr9131911101131911156+3'-UTR3.904565.75237K562PCBP1
chr9131910655131910764+3'-UTR4.3905515.45401K562PCBP1
chr9131909959131910021+3'-UTR7.2334943.45156HepG2UPF1
chr9131910285131910334+3'-UTR5.7797329.56847HepG2UPF1
chr9131885346131885421+5'-UTR,CDS,intron-Distal,intron-Proximal3.220583.17151K562UCHL5
chr9131873732131873777+5'-UTR,intron-Proximal4.285205.63105K562DDX3X
chr9131873777131873853+5'-UTR4.9927212.84198K562DDX3X
chr9131873822131873906+5'-UTR,CDS3.824463.77743K562DDX52
chr9131897171131897256+CDS,intron-Distal,intron-Proximal4.118605.47926K562AQR
chr9131904721131904763+CDS,intron-Proximal3.503118.07578K562YBX3
chr9131893810131893919+CDS,intron-Distal,intron-Proximal4.692526.00552HepG2G3BP1
chr9131904818131904868+CDS,intron-Proximal4.030803.45219HepG2RBFOX2
chr9131899797131899895+CDS,intron-Distal,intron-Proximal4.654167.56947K562SF3B4
chr9131899870131899933+CDS,intron-Distal,intron-Proximal3.419384.47362HepG2G3BP1
chr9131897102131897174+CDS,intron-Distal,intron-Proximal4.156343.39686HepG2G3BP1
chr9131899984131900017+CDS,intron-Distal,intron-Proximal3.723284.41130K562AQR
chr9131909595131909670+CDS,intron-Proximal4.050935.16342K562SF3B4
chr9131899971131899984+CDS,intron-Distal,intron-Proximal3.560863.94787K562AQR
chr9131903101131903149+intron-Distal3.958563.19526HepG2CSTF2T
chr9131883917131883981+intron-Distal4.148594.82720K562QKI
chr9131903095131903197+intron-Distal5.056064.65580K562GTF2F1
chr9131904605131904707+intron-Distal,intron-Proximal3.847163.46495K562TARDBP
chr9131883922131884024+intron-Distal4.902565.89032HepG2QKI
chr9131903097131903156+intron-Distal4.086893.58513HepG2GTF2F1
chr9131904639131904710+intron-Proximal3.594053.67894HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPP2R4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPP2R4 is not available on ENCORE database.

  • 76 RBPs can affect the levels of PPP2R4.  








The Knockdown/knockout RNA-Seq assay for PPP2R4 is not available on ENCORE database.





76 RBPs can affect the gene expression of PPP2R4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPP2R4ENSG00000119383.152608.036002179.088400.259103.928703.22790HepG2ACO1
PPP2R4ENSG00000119383.154759.646603212.260900.567205.512704.79220HepG2AKAP1
PPP2R4ENSG00000119383.151857.290402657.77570-0.517005.242004.17720HepG2ASCC1
PPP2R4ENSG00000119383.153215.842603638.00870-0.178002.010601.40850HepG2AUH
PPP2R4ENSG00000119383.151259.386901694.00230-0.427703.438202.43990HepG2BCLAF1
PPP2R4ENSG00000119383.151494.15080998.663100.581206.631705.75250HepG2BOP1
PPP2R4ENSG00000119383.15592.323301252.63960-1.0805021.9475020.16520HepG2CALR
PPP2R4ENSG00000119383.152018.461301433.289800.493802.700301.94510HepG2CNOT7
PPP2R4ENSG00000119383.15583.03990916.80410-0.653006.600105.57150HepG2CPSF6
PPP2R4ENSG00000119383.152361.375302015.334500.228503.185802.29560HepG2DDX19B
PPP2R4ENSG00000119383.154849.115403076.887200.656208.371907.33320HepG2DDX3X
PPP2R4ENSG00000119383.153889.514602643.617700.557005.348004.51530HepG2DDX6
PPP2R4ENSG00000119383.151732.941802084.79150-0.266703.316402.58440HepG2DKC1
PPP2R4ENSG00000119383.151374.716701820.57660-0.405303.694502.44410HepG2ESF1
PPP2R4ENSG00000119383.151710.635204176.89140-1.2879073.4170071.11980HepG2ETF1
PPP2R4ENSG00000119383.153635.207802833.605600.359302.918202.20630HepG2FXR1
PPP2R4ENSG00000119383.151983.605102628.19640-0.405903.195402.48320HepG2G3BP1
PPP2R4ENSG00000119383.151340.776802662.19340-0.9895019.2443017.55410HepG2HNRNPK
PPP2R4ENSG00000119383.152252.486002834.59810-0.331602.389601.77820HepG2MAGOH
PPP2R4ENSG00000119383.151078.218501442.14930-0.419603.799702.37480HepG2NAA15
PPP2R4ENSG00000119383.151002.970101532.02730-0.611207.725905.38300HepG2NIP7
PPP2R4ENSG00000119383.15586.17590879.41210-0.585205.111104.10680HepG2NSUN2
PPP2R4ENSG00000119383.151974.065802597.67500-0.396103.177802.40580HepG2PABPC4
PPP2R4ENSG00000119383.151251.728001480.15220-0.241802.422701.62570HepG2PARN
PPP2R4ENSG00000119383.152013.298102609.06320-0.374006.459805.59270HepG2PCBP1
PPP2R4ENSG00000119383.151201.153101555.85720-0.373305.081304.06720HepG2PRPF4
PPP2R4ENSG00000119383.151477.028302449.72360-0.7299014.7534013.28260HepG2PUM2
PPP2R4ENSG00000119383.152441.598602875.11600-0.235802.146101.58420HepG2QKI
PPP2R4ENSG00000119383.15603.416101453.89890-1.268706.990205.89610HepG2RAVER1
PPP2R4ENSG00000119383.153051.151203491.11440-0.194301.868101.42070HepG2RBM22
PPP2R4ENSG00000119383.151609.465002043.24550-0.344303.191202.12210HepG2RBM27
PPP2R4ENSG00000119383.152170.173502751.97110-0.342705.556704.72070HepG2RECQL
PPP2R4ENSG00000119383.15910.209301100.25650-0.273601.929401.40810HepG2RPS19
PPP2R4ENSG00000119383.15830.302901331.68750-0.6815015.2636013.93480HepG2SAFB2
PPP2R4ENSG00000119383.152091.585602763.92430-0.402107.264706.37870HepG2SF3B4
PPP2R4ENSG00000119383.151869.392802214.49240-0.244403.183602.43940HepG2SLBP
PPP2R4ENSG00000119383.15757.355401092.20310-0.528202.887402.08810HepG2SNRNP70
PPP2R4ENSG00000119383.151787.267802347.19030-0.393207.231806.41470HepG2SRSF9
PPP2R4ENSG00000119383.152867.263403423.55990-0.255803.964903.37510HepG2SSB
PPP2R4ENSG00000119383.151035.657601417.24950-0.452502.901001.63820HepG2STAU1
PPP2R4ENSG00000119383.151077.129901908.27130-0.8251010.647409.46260HepG2SUPV3L1
PPP2R4ENSG00000119383.151396.376502593.40050-0.8932025.6752024.19870HepG2TAF15
PPP2R4ENSG00000119383.15917.189501278.97770-0.479704.568903.33600HepG2TFIP11
PPP2R4ENSG00000119383.151984.703802382.73710-0.263702.380101.60270HepG2TIA1
PPP2R4ENSG00000119383.151083.860101453.01580-0.422904.905604.27860HepG2TIAL1
PPP2R4ENSG00000119383.151688.311202256.28570-0.418404.769703.59020HepG2TUFM
PPP2R4ENSG00000119383.151663.607301454.915200.193301.951101.34770HepG2UPF1
PPP2R4ENSG00000119383.151866.278001404.666200.409806.788905.92110HepG2UTP3
PPP2R4ENSG00000119383.151234.115601535.44790-0.315204.515403.69080HepG2ZC3H8
PPP2R4ENSG00000119383.15873.187801315.71220-0.591506.930105.01240K562AARS
PPP2R4ENSG00000119383.153109.741502011.628200.6283017.8886016.56720K562AGGF1
PPP2R4ENSG00000119383.152875.115002210.425400.379203.895902.68730K562AKAP8
PPP2R4ENSG00000119383.152628.331102093.178100.328402.980202.30160K562AKAP8L
PPP2R4ENSG00000119383.152339.050501690.008800.468804.657803.25460K562DDX3X
PPP2R4ENSG00000119383.152179.500901713.444800.347004.529302.71490K562DDX6
PPP2R4ENSG00000119383.152710.427602252.486500.266903.222702.26840K562DKC1
PPP2R4ENSG00000119383.15923.107401186.75880-0.362502.728701.39770K562DNAJC21
PPP2R4ENSG00000119383.151336.108801097.573000.283602.762801.96640K562EIF3G
PPP2R4ENSG00000119383.152000.001001541.224000.375804.494302.78550K562EWSR1
PPP2R4ENSG00000119383.152215.587701495.140300.567307.340505.89890K562FIP1L1
PPP2R4ENSG00000119383.15790.400601249.92060-0.661206.660204.77910K562FKBP4
PPP2R4ENSG00000119383.152201.604201836.192200.261703.027902.39800K562FXR1
PPP2R4ENSG00000119383.15413.272401085.90950-1.3937018.6169016.32500K562G3BP2
PPP2R4ENSG00000119383.151096.307901439.59450-0.393003.724503.04490K562HNRNPC
PPP2R4ENSG00000119383.151863.926801229.911400.599705.519604.14560K562HNRNPM
PPP2R4ENSG00000119383.152489.168102026.900500.296302.379601.63870K562HSPD1
PPP2R4ENSG00000119383.15847.605501114.32660-0.394702.901201.38310K562KHDRBS1
PPP2R4ENSG00000119383.152754.596502221.428100.310302.691701.87910K562KIF1C
PPP2R4ENSG00000119383.152715.118602126.418400.352502.784901.70550K562MAK16
PPP2R4ENSG00000119383.152228.625001351.870900.721103.590102.42140K562PABPN1
PPP2R4ENSG00000119383.152456.234601697.477800.533006.222004.90720K562PPIG
PPP2R4ENSG00000119383.152057.598901603.286100.359802.851602.09210K562PRPF8
PPP2R4ENSG00000119383.152834.156401773.451400.676307.216706.18200K562PTBP1
PPP2R4ENSG00000119383.153262.202203841.08180-0.235703.188602.15890K562PUM2
PPP2R4ENSG00000119383.153682.410202075.946200.8268010.089209.09860K562PUS1
PPP2R4ENSG00000119383.15543.625701036.02250-0.930405.634503.50150K562RAVER1
PPP2R4ENSG00000119383.152947.609702022.624000.5432010.416009.28960K562RBM15
PPP2R4ENSG00000119383.151231.266301683.51500-0.451303.458801.38350K562SAFB2
PPP2R4ENSG00000119383.152396.495601507.306600.668902.827301.50450K562SFPQ
PPP2R4ENSG00000119383.151850.226302104.09940-0.185502.184501.34420K562SRPK2
PPP2R4ENSG00000119383.153039.604801738.749000.805708.602007.35920K562SRSF1
PPP2R4ENSG00000119383.152029.529601710.063900.247002.175201.44640K562SYNCRIP
PPP2R4ENSG00000119383.15725.630901086.86690-0.582907.457006.13950K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPP2R4 is not available on ENCORE database.





17 RBPs can affect the splicing of PPP2R4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPP2R4ENSG00000119383.15chr9+1318902421318903471318853301318854171318912631318913890.093000.000980.07572includedHepG2G3BP1
SEPPP2R4ENSG00000119383.15chr9+131885330131885417131882791131882889131891263131891344-0.134000.000000.00006excludedK562SF3B4
SEPPP2R4ENSG00000119383.15chr9+131890242131890347131885330131885417131891263131891389-0.134000.000010.00017excludedHepG2U2AF2
SEPPP2R4ENSG00000119383.15chr9+1318902421318903471318853301318854171318912631318913890.105000.000060.00718includedHepG2NCBP2
SEPPP2R4ENSG00000119383.15chr9+1318902421318903471318853301318854171318912631318913890.134000.000020.01197includedHepG2XPO5
SEPPP2R4ENSG00000119383.15chr9+1318902421318903471318853301318854171318912631318913890.130000.000090.01108includedHepG2IGF2BP3
SEPPP2R4ENSG00000119383.15chr9+1318902421318903471318853301318854171318912631318913890.133000.000080.09532includedHepG2GTF2F1
SEPPP2R4ENSG00000119383.15chr9+1318902421318903471318853301318854171318912631318913890.138000.000090.02698includedHepG2XRCC6
SEPPP2R4ENSG00000119383.15chr9+131890242131890347131885330131885417131891263131891389-0.064000.001770.03075excludedK562HNRNPC
MXEPPP2R4ENSG00000119383.15chr9+1318853301318854081318902421318903471318827911318828891318912631318913890.075000.000930.080941includedHepG2RBM22
MXEPPP2R4ENSG00000119383.15chr9+131891263131891389131893800131893918131885330131885417131897073131897173-0.182000.005190.074912includedHepG2FTO
MXEPPP2R4ENSG00000119383.15chr9+131882791131882889131891263131891389131873687131873910131893800131893918-0.176000.000040.001582includedHepG2SRSF1
MXEPPP2R4ENSG00000119383.15chr9+1318853301318854171318912631318913891318827911318828891318938001318939180.140000.000450.010901includedK562DROSHA
MXEPPP2R4ENSG00000119383.15chr9+131882791131882889131899870131899971131873687131873910131904723131904831-0.162000.000080.005122includedHepG2TAF15
MXEPPP2R4ENSG00000119383.15chr9+1318912631318913891318938001318939181318827911318828891318970731318971730.178000.002800.036011includedK562U2AF2
MXEPPP2R4ENSG00000119383.15chr9+131885330131885417131891263131891389131882791131882889131893800131893918-0.145000.005110.048962includedHepG2SFPQ
MXEPPP2R4ENSG00000119383.15chr9+131885330131885417131891263131891389131882791131882889131893800131893918-0.273000.002060.076312includedHepG2DROSHA
MXEPPP2R4ENSG00000119383.15chr9+131885330131885417131899870131899971131882791131882889131904723131904831-0.093000.001080.051612includedK562PHF6
MXEPPP2R4ENSG00000119383.15chr9+131885330131885417131891263131891389131882791131882889131893800131893918-0.157000.000900.047612includedK562PHF6
MXEPPP2R4ENSG00000119383.15chr9+1318853301318854171318912631318913891318737131318739101318938001318939180.052000.000830.029301includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPP2R4 is not avaliable on ENCORE database.