PKP2

General Information

Gene Name       : PKP2
Gene ID             : ENSG00000057294.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PKP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PKP2ENSG00000057294.140.000.060.03ENCSR000AEF
HepG2PKP2ENSG00000057294.1422.9230.3926.66ENCSR985KAT
K562PKP2ENSG00000057294.142.402.502.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PKP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PKP2 RNA is bound by 3 proteins.  







eCLIP assay for PKP2 is not avaliable on ENCORE database.





3 proteins are bound to PKP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr123300371733003790-CDS,intron-Distal4.665304.78529HepG2BCLAF1
chr123303080833030919-CDS,intron-Distal3.545373.64266HepG2PPIG
chr123304912933049176-intron-Distal4.185133.12827HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PKP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PKP2 is not available on ENCORE database.

  • 92 RBPs can affect the levels of PKP2.  








The Knockdown/knockout RNA-Seq assay for PKP2 is not available on ENCORE database.





92 RBPs can affect the gene expression of PKP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PKP2ENSG00000057294.9775.87360539.440100.524304.292802.98430HepG2AATF
PKP2ENSG00000057294.9440.57250611.63430-0.473302.901402.09970HepG2ASCC1
PKP2ENSG00000057294.9699.113001178.40760-0.7532015.0624013.68720HepG2AUH
PKP2ENSG00000057294.9525.99100781.17110-0.570603.679302.60030HepG2BCCIP
PKP2ENSG00000057294.9493.56180678.78340-0.459702.600201.72710HepG2BCLAF1
PKP2ENSG00000057294.9455.145001196.65450-1.3946027.0157025.46820HepG2BOP1
PKP2ENSG00000057294.9570.92010932.59330-0.708006.442805.32880HepG2CALR
PKP2ENSG00000057294.9862.63060581.101000.569904.652603.66440HepG2CIRBP
PKP2ENSG00000057294.9179.35230552.52320-1.6232015.1903013.46070HepG2CNOT7
PKP2ENSG00000057294.9668.735201098.61910-0.716207.967406.85190HepG2CPSF6
PKP2ENSG00000057294.9650.68110482.533600.431202.925101.82230HepG2CSTF2
PKP2ENSG00000057294.9514.90570998.03150-0.9548024.3276022.53540HepG2DAZAP1
PKP2ENSG00000057294.9777.12940588.544200.400904.698403.64920HepG2DDX19B
PKP2ENSG00000057294.9583.28070779.39600-0.418203.804902.45760HepG2DDX1
PKP2ENSG00000057294.9823.52000595.560400.467503.676002.90290HepG2DDX21
PKP2ENSG00000057294.9425.06310581.84940-0.453002.708101.33630HepG2DDX28
PKP2ENSG00000057294.9520.38980768.04990-0.561603.622902.75210HepG2DDX55
PKP2ENSG00000057294.9763.550101247.55440-0.708304.083602.90800HepG2DDX59
PKP2ENSG00000057294.9494.85720766.90130-0.632005.730004.32930HepG2DDX5
PKP2ENSG00000057294.9454.75120737.10990-0.696807.224105.70820HepG2DHX30
PKP2ENSG00000057294.9496.16260764.25030-0.623207.724806.59710HepG2DNAJC21
PKP2ENSG00000057294.9541.99850757.46320-0.482906.249305.32580HepG2DNAJC2
PKP2ENSG00000057294.91166.57080730.679400.674906.849105.46550HepG2EEF2
PKP2ENSG00000057294.9730.57460562.192500.377902.739101.66240HepG2EIF3G
PKP2ENSG00000057294.91056.57480646.152600.709306.347505.38240HepG2EIF4A3
PKP2ENSG00000057294.9721.48700943.09080-0.386402.946802.10730HepG2EIF4G2
PKP2ENSG00000057294.91133.832501353.01380-0.255002.559001.97700HepG2ETF1
PKP2ENSG00000057294.9443.65910639.29130-0.527003.351701.96090HepG2FKBP4
PKP2ENSG00000057294.9384.005401100.45000-1.5189010.048608.13980HepG2FTO
PKP2ENSG00000057294.91171.21170652.084500.844809.879708.64490HepG2FXR1
PKP2ENSG00000057294.9963.73010642.201700.585505.028603.81740HepG2G3BP2
PKP2ENSG00000057294.9691.41850528.107000.388602.414001.58260HepG2GEMIN5
PKP2ENSG00000057294.9699.697301245.43900-0.831909.049907.93420HepG2GPKOW
PKP2ENSG00000057294.91232.66530771.571600.675808.204007.17790HepG2HNRNPA1
PKP2ENSG00000057294.9728.791201079.17390-0.566408.611707.43660HepG2HNRNPF
PKP2ENSG00000057294.9817.76340612.620000.416602.813102.10900HepG2HNRNPK
PKP2ENSG00000057294.9667.67700909.18080-0.445406.290205.31380HepG2HNRNPL
PKP2ENSG00000057294.9667.123601188.53910-0.8332010.103708.98660HepG2HNRNPLL
PKP2ENSG00000057294.9862.78720605.237600.511404.920203.69190HepG2HNRNPM
PKP2ENSG00000057294.9657.111501062.68000-0.693509.632108.35770HepG2IGF2BP1
PKP2ENSG00000057294.9426.23280581.71220-0.448704.485303.19920HepG2KIF1C
PKP2ENSG00000057294.9879.65460655.940400.423302.465101.86630HepG2MATR3
PKP2ENSG00000057294.9798.216001212.00540-0.602503.670402.54390HepG2MTPAP
PKP2ENSG00000057294.91050.45450671.372400.645705.685804.79310HepG2NCBP2
PKP2ENSG00000057294.9690.555401053.81740-0.609805.852004.78830HepG2NSUN2
PKP2ENSG00000057294.9620.42940825.66920-0.412303.337902.49490HepG2PRPF4
PKP2ENSG00000057294.91123.73610617.853900.8629017.6198016.46740HepG2PTBP1
PKP2ENSG00000057294.9679.11550944.64910-0.476104.546803.80420HepG2PUF60
PKP2ENSG00000057294.9947.29840648.182900.547308.251507.28570HepG2PUS1
PKP2ENSG00000057294.9631.58230902.97840-0.515705.336704.19270HepG2RBM15
PKP2ENSG00000057294.9686.831401130.85990-0.7194011.5408010.63570HepG2RBM22
PKP2ENSG00000057294.9964.51590596.943100.692106.122004.54290HepG2RCC2
PKP2ENSG00000057294.91773.95750687.598901.3672050.0265048.39570HepG2NELFE
PKP2ENSG00000057294.91078.72690640.428700.7521013.8089012.59480HepG2RECQL
PKP2ENSG00000057294.9718.378001162.50860-0.694408.505807.40940HepG2RPLP0
PKP2ENSG00000057294.9498.34400690.94810-0.471402.239801.38740HepG2RPS10
PKP2ENSG00000057294.9792.82840577.162200.457903.749903.04470HepG2RPS19
PKP2ENSG00000057294.9883.70260677.969500.382202.492701.73090HepG2RPS2
PKP2ENSG00000057294.9905.11940692.057900.387102.532401.50600HepG2RPS5
PKP2ENSG00000057294.9396.21240586.11590-0.564903.339602.48600HepG2RRP9
PKP2ENSG00000057294.9512.07780759.23650-0.568207.608506.61750HepG2SAFB2
PKP2ENSG00000057294.91616.30570746.982901.1135013.1498011.61210HepG2SF3A3
PKP2ENSG00000057294.9683.948301176.45860-0.782509.734008.48300HepG2SF3B1
PKP2ENSG00000057294.9688.36200905.66020-0.395803.854703.04780HepG2SLBP
PKP2ENSG00000057294.9744.99980885.41070-0.249102.249001.65940HepG2SMN1
PKP2ENSG00000057294.9803.963501309.00220-0.703304.765903.72850HepG2SNRNP70
PKP2ENSG00000057294.91458.141601277.248400.191001.847201.41250HepG2SRFBP1
PKP2ENSG00000057294.91981.53970671.412001.5613071.6228069.96780HepG2SRSF1
PKP2ENSG00000057294.9653.06380932.63850-0.514107.168606.22580HepG2SRSF5
PKP2ENSG00000057294.9628.652401060.24670-0.7541014.0510012.69360HepG2SRSF7
PKP2ENSG00000057294.91379.191401108.925500.314603.760003.18270HepG2SSB
PKP2ENSG00000057294.91285.853201060.722400.277602.765302.14360HepG2SUCLG1
PKP2ENSG00000057294.9432.33770764.58780-0.822507.006206.00860HepG2SUPV3L1
PKP2ENSG00000057294.91133.51880603.523400.9092012.6901011.61990HepG2TAF15
PKP2ENSG00000057294.9670.588701158.27560-0.788509.847708.60410HepG2TARDBP
PKP2ENSG00000057294.9465.03630828.45460-0.8331012.1290011.21120HepG2TIAL1
PKP2ENSG00000057294.9413.25180835.80890-1.0162021.4976020.10950HepG2TRIM56
PKP2ENSG00000057294.9587.41310750.38110-0.353201.927401.39210HepG2U2AF1
PKP2ENSG00000057294.9191.38050451.66960-1.2388012.9735011.35920HepG2UCHL5
PKP2ENSG00000057294.9461.69930700.14390-0.600703.363002.25210HepG2UPF2
PKP2ENSG00000057294.9801.98890639.579500.326402.857502.25210HepG2UTP3
PKP2ENSG00000057294.91155.23370773.552900.578503.738302.50290HepG2XRCC6
PKP2ENSG00000057294.9661.58400814.88030-0.300702.039601.44910HepG2ZC3H8
PKP2ENSG00000057294.9511.98580728.57920-0.509006.601605.85160HepG2ZNF622
PKP2ENSG00000057294.9120.51860192.63540-0.676602.857201.60870K562ABCF1
PKP2ENSG00000057294.956.64080167.76930-1.566607.614106.72040K562AQR
PKP2ENSG00000057294.993.43330208.49370-1.158005.254703.73540K562CNOT7
PKP2ENSG00000057294.953.2995097.98870-0.878502.481701.61950K562EFTUD2
PKP2ENSG00000057294.975.50150138.46310-0.874903.468502.51050K562FIP1L1
PKP2ENSG00000057294.946.1963088.76870-0.942302.592301.82270K562GPKOW
PKP2ENSG00000057294.998.65350163.50770-0.728902.676201.93170K562GRSF1
PKP2ENSG00000057294.997.62790145.64300-0.577102.161901.44170K562MTPAP
PKP2ENSG00000057294.9117.76370200.30160-0.766302.690301.47360K562PABPC1
PKP2ENSG00000057294.988.77140157.17530-0.824203.533702.58730K562PPIG
PKP2ENSG00000057294.991.97530159.67710-0.795803.659402.72930K562SF3A3
PKP2ENSG00000057294.948.5147092.34940-0.928702.441501.49210K562SUPV3L1
PKP2ENSG00000057294.9102.59900198.82150-0.954505.295503.50770K562WRN
PKP2ENSG00000057294.9125.47570188.97510-0.590802.453601.64930K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PKP2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PKP2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PKP2 is not avaliable on ENCORE database.