NSA2

General Information

Gene Name       : NSA2
Gene ID             : ENSG00000164346.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NSA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NSA2ENSG00000164346.9250.54215.47233.00ENCSR000AEF
HepG2NSA2ENSG00000164346.985.90111.6398.77ENCSR985KAT
K562NSA2ENSG00000164346.9121.01165.46143.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NSA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NSA2 RNA is bound by 9 proteins.  







eCLIP assay for NSA2 is not avaliable on ENCORE database.





9 proteins are bound to NSA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr57407252974072542+3'-UTR5.070617.04013HepG2BCLAF1
chr57406307674063127+5'-UTR5.482716.02643HepG2DDX3X
chr57406312874063190+5'-UTR,CDS,intron-Proximal3.8974119.03300K562DDX3X
chr57406307874063128+5'-UTR4.1562711.22180K562DDX3X
chr57406317774063188+5'-UTR,CDS4.8681117.35852K562YBX3
chr57406970774069793+CDS,intron-Distal4.3840015.55920HepG2BCLAF1
chr57406517474065187+CDS4.005596.14226K562ZNF622
chr57406475574064774+CDS,intron-Proximal5.6047514.45081K562YBX3
chr57406645574066474+CDS,intron-Proximal3.837626.81385HepG2BCLAF1
chr57406645874066479+CDS3.063894.88483K562ZNF622
chr57406974974069799+CDS,intron-Distal3.454317.85158K562UCHL5
chr57406475574064767+CDS,intron-Proximal3.598596.20524K562DDX3X
chr57406477474064784+CDS5.3793111.11497K562YBX3
chr57406515374065187+CDS3.848783.79347HepG2GRWD1
chr57406486974064925+CDS5.561039.17286K562UCHL5
chr57406489174064918+CDS5.1577514.25738HepG2BCLAF1
chr57406645674066493+CDS4.129589.87150K562UCHL5
chr57406651174066571+CDS3.9226416.19036K562ZNF622
chr57406491874064943+CDS4.6757215.10546HepG2BCLAF1
chr57406657074066610+CDS3.2407810.28461K562UCHL5
chr57406971074069799+CDS,intron-Distal3.8914010.37617K562PUM1
chr57406516574065188+CDS3.857396.81385HepG2BCLAF1
chr57406653774066570+CDS3.8963115.22699K562UCHL5
chr57406484974064895+CDS3.597165.29881K562ZNF800
chr57406503874065106+CDS,intron-Proximal3.7270712.55157HepG2BCLAF1
chr57406651574066597+CDS3.011907.02289HepG2SUB1
chr57406657174066619+CDS3.6570115.29655K562ZNF622
chr57406649374066537+CDS4.0101713.94470K562UCHL5
chr57406506074065121+CDS3.282019.46864K562UCHL5
chr57406971774069797+CDS,intron-Distal3.107377.47194HepG2GRWD1
chr57406660574066635+CDS3.993325.01703K562PUM1
chr57406649874066635+CDS5.4592136.79636HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NSA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NSA2 is not available on ENCORE database.

  • 113 RBPs can affect the levels of NSA2.  








The Knockdown/knockout RNA-Seq assay for NSA2 is not available on ENCORE database.





113 RBPs can affect the gene expression of NSA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NSA2ENSG00000164346.5887.440801195.57650-0.430005.855805.03560HepG2ACO1
NSA2ENSG00000164346.51973.368802932.94780-0.571705.247604.54420HepG2AKAP1
NSA2ENSG00000164346.51177.815801544.74180-0.391302.511701.51760HepG2AKAP8
NSA2ENSG00000164346.51581.316102426.80260-0.617906.996105.77350HepG2ASCC1
NSA2ENSG00000164346.51246.268101955.31690-0.6498015.3149013.93020HepG2AUH
NSA2ENSG00000164346.5604.90960952.02700-0.654304.792603.63830HepG2BCLAF1
NSA2ENSG00000164346.51449.755402098.88470-0.533806.302105.44070HepG2BOP1
NSA2ENSG00000164346.51697.652002633.57450-0.633505.560404.15480HepG2CCAR1
NSA2ENSG00000164346.5514.400901246.99260-1.2775013.0229011.41310HepG2CNOT7
NSA2ENSG00000164346.51603.483401838.90720-0.197602.242601.56470HepG2DAZAP1
NSA2ENSG00000164346.51401.954001144.778900.292302.343201.50960HepG2DDX24
NSA2ENSG00000164346.51174.283502809.61620-1.2586025.1034023.41290HepG2DDX3X
NSA2ENSG00000164346.5979.358201242.98010-0.343902.853001.47580HepG2DDX52
NSA2ENSG00000164346.51164.938402413.34380-1.0508014.1966012.93600HepG2DDX6
NSA2ENSG00000164346.51457.777101143.795000.349804.394103.57680HepG2DKC1
NSA2ENSG00000164346.5783.987401031.06680-0.395203.910503.08630HepG2DNAJC21
NSA2ENSG00000164346.5686.457901021.85560-0.5739010.385209.21880HepG2DNAJC2
NSA2ENSG00000164346.51116.030101483.07510-0.410203.162502.18170HepG2EEF2
NSA2ENSG00000164346.5618.318001077.24070-0.800907.269105.51080HepG2AGO1
NSA2ENSG00000164346.5817.349602320.17930-1.5052033.4377031.53550HepG2EIF2S1
NSA2ENSG00000164346.51402.156002564.15470-0.8708011.127409.87380HepG2EIF4A3
NSA2ENSG00000164346.51936.416102496.40440-0.366502.021101.42770HepG2EIF4B
NSA2ENSG00000164346.52330.110101814.312600.360905.950304.80540HepG2EIF4G1
NSA2ENSG00000164346.51955.186802244.91590-0.199401.985501.45770HepG2ETF1
NSA2ENSG00000164346.51233.851002586.87090-1.0680019.1872017.54000HepG2FXR1
NSA2ENSG00000164346.5799.758202399.83560-1.5853034.8074032.54180HepG2G3BP1
NSA2ENSG00000164346.51824.778502547.55870-0.481404.737703.55820HepG2G3BP2
NSA2ENSG00000164346.5796.206201057.49570-0.409402.569101.59300HepG2GNB2L1
NSA2ENSG00000164346.51698.027902184.41920-0.363402.428001.82410HepG2GPKOW
NSA2ENSG00000164346.5899.551601141.32130-0.343402.885301.88930HepG2HDGF
NSA2ENSG00000164346.5772.549701040.94360-0.430203.730402.99610HepG2HNRNPA1
NSA2ENSG00000164346.5682.875101157.82190-0.761709.760308.52480HepG2HNRNPC
NSA2ENSG00000164346.51907.993302429.73940-0.348702.969602.24650HepG2HNRNPK
NSA2ENSG00000164346.51274.656301525.60780-0.259302.009801.38550HepG2IGF2BP1
NSA2ENSG00000164346.51023.704002439.42790-1.2527025.1308023.34850HepG2IGF2BP2
NSA2ENSG00000164346.51381.303702289.10660-0.728802.943701.92970HepG2IGF2BP3
NSA2ENSG00000164346.5846.289201215.67760-0.522503.153701.73360HepG2ILF3
NSA2ENSG00000164346.51742.807102453.55880-0.493503.521402.37220HepG2KHSRP
NSA2ENSG00000164346.51994.098202780.00060-0.479303.549302.60800HepG2LARP4
NSA2ENSG00000164346.51141.845402587.77290-1.1803022.0525020.29410HepG2MAGOH
NSA2ENSG00000164346.51519.105002602.29760-0.776609.309108.20800HepG2MATR3
NSA2ENSG00000164346.51309.408201591.82120-0.281802.054501.35190HepG2MSI2
NSA2ENSG00000164346.51188.162502663.62990-1.1647020.7355019.10530HepG2NCBP2
NSA2ENSG00000164346.5598.496101594.21680-1.4134016.6480013.50500HepG2NKRF
NSA2ENSG00000164346.51275.795702372.29020-0.8949013.0596011.52000HepG2PABPC4
NSA2ENSG00000164346.51356.884602376.72400-0.8087025.5176023.99060HepG2PCBP1
NSA2ENSG00000164346.5797.27310995.63460-0.320502.569901.38900HepG2PKM
NSA2ENSG00000164346.5839.483202418.36430-1.5265073.5925071.67790HepG2PTBP1
NSA2ENSG00000164346.51169.989201740.69370-0.573207.303006.39400HepG2PUF60
NSA2ENSG00000164346.51504.638501847.86760-0.296404.499403.78330HepG2PUM1
NSA2ENSG00000164346.51496.053301846.49030-0.303602.843402.16430HepG2PUM2
NSA2ENSG00000164346.5817.517201217.74520-0.5749010.463209.39700HepG2PUS1
NSA2ENSG00000164346.5981.305302619.23610-1.4164054.9220052.81690HepG2QKI
NSA2ENSG00000164346.52136.140901490.865900.518802.673201.97910HepG2RAVER1
NSA2ENSG00000164346.51207.297402377.09190-0.9774022.7404020.91920HepG2RBM25
NSA2ENSG00000164346.51375.209102691.44150-0.9687035.4676033.99800HepG2NELFE
NSA2ENSG00000164346.51681.654402506.64990-0.5759014.0929012.86900HepG2RECQL
NSA2ENSG00000164346.51357.932201668.82660-0.297402.207401.58800HepG2RPLP0
NSA2ENSG00000164346.51003.751401464.13090-0.544603.286902.25820HepG2RPS10
NSA2ENSG00000164346.5621.963201171.47800-0.9134015.0466013.77150HepG2RPS19
NSA2ENSG00000164346.5397.435801152.10900-1.5355030.3902027.99240HepG2RPS2
NSA2ENSG00000164346.5836.871801252.16010-0.581304.065503.09450HepG2RPS3A
NSA2ENSG00000164346.52620.560101888.756900.472303.454902.69890HepG2SF3A3
NSA2ENSG00000164346.51319.088802517.90330-0.9327033.1201031.48160HepG2SF3B4
NSA2ENSG00000164346.51001.718501194.53950-0.254002.845002.19370HepG2SMN1
NSA2ENSG00000164346.51759.926402119.28050-0.268103.423202.88370HepG2SRFBP1
NSA2ENSG00000164346.51424.256402628.11570-0.8838032.6796031.44830HepG2SRSF1
NSA2ENSG00000164346.51249.418601718.73460-0.460107.635706.66440HepG2SRSF5
NSA2ENSG00000164346.51158.265602138.08620-0.8844030.6141029.15870HepG2SRSF9
NSA2ENSG00000164346.51528.546401954.62930-0.354705.776604.93790HepG2SUCLG1
NSA2ENSG00000164346.5775.405001072.29280-0.467702.539001.88810HepG2SUPV3L1
NSA2ENSG00000164346.51606.426202362.16920-0.5563010.917209.92010HepG2TAF15
NSA2ENSG00000164346.51338.883102031.60150-0.601607.426606.31550HepG2TARDBP
NSA2ENSG00000164346.51320.415302170.60050-0.7171013.3993011.59090HepG2TIA1
NSA2ENSG00000164346.5557.344001117.73750-1.0039019.4543018.34810HepG2TIAL1
NSA2ENSG00000164346.5896.707301127.58670-0.330503.766503.13050HepG2TRIM56
NSA2ENSG00000164346.51315.902401700.65640-0.370003.536802.53530HepG2TUFM
NSA2ENSG00000164346.51193.231301800.16560-0.593305.585804.36990HepG2UBE2L3
NSA2ENSG00000164346.51218.034601675.03400-0.459608.483407.37130HepG2UPF1
NSA2ENSG00000164346.53075.694702528.008700.282804.312203.63110K562AGGF1
NSA2ENSG00000164346.53184.218802630.493400.275502.331701.73090K562AKAP8L
NSA2ENSG00000164346.54094.728303357.833500.286102.455101.89610K562AQR
NSA2ENSG00000164346.53444.570102759.994000.319604.339703.16720K562ATP5C1
NSA2ENSG00000164346.51592.901501905.92880-0.258802.915001.56210K562BCCIP
NSA2ENSG00000164346.51423.121901841.97060-0.372205.380504.02420K562BCLAF1
NSA2ENSG00000164346.53242.106904490.26330-0.469902.467901.47460K562CNOT7
NSA2ENSG00000164346.53365.112104118.92660-0.291604.156902.77990K562CPEB4
NSA2ENSG00000164346.53073.494303816.61960-0.312403.504002.62030K562CPSF6
NSA2ENSG00000164346.51102.139401397.40960-0.342403.478302.27200K562CSTF2
NSA2ENSG00000164346.52117.563002659.93760-0.329004.943303.29860K562DDX21
NSA2ENSG00000164346.54252.978302830.688400.5872014.6328012.28450K562DKC1
NSA2ENSG00000164346.52090.848102810.55710-0.426807.344006.25450K562EIF2S2
NSA2ENSG00000164346.51180.015501625.01530-0.461603.119302.01820K562EIF3D
NSA2ENSG00000164346.53764.612804664.14230-0.309104.180703.03210K562EIF4G2
NSA2ENSG00000164346.53172.884503883.12710-0.291402.369301.57640K562FMR1
NSA2ENSG00000164346.52516.157103291.21680-0.387402.630001.74090K562FTO
NSA2ENSG00000164346.51822.009501459.294600.320203.900703.20060K562FXR1
NSA2ENSG00000164346.52362.759501725.279400.453503.067302.31650K562G3BP2
NSA2ENSG00000164346.51252.978502155.87660-0.7829014.3789013.10430K562HNRNPC
NSA2ENSG00000164346.51408.132601925.20070-0.451205.017703.42030K562HNRNPF
NSA2ENSG00000164346.54241.991302847.221200.575106.205504.73340K562HNRNPM
NSA2ENSG00000164346.56232.030204693.660900.408904.463203.45800K562HSPD1
NSA2ENSG00000164346.52506.039303556.92880-0.505207.015405.58740K562METAP2
NSA2ENSG00000164346.52332.582702969.19480-0.348105.669204.53780K562MTPAP
NSA2ENSG00000164346.53487.600702192.047200.669906.400504.84900K562NAA15
NSA2ENSG00000164346.52813.763403299.24490-0.229602.807002.05570K562NSUN2
NSA2ENSG00000164346.52179.742302829.43000-0.376402.986102.12270K562PCBP3
NSA2ENSG00000164346.51742.382402170.28400-0.316803.265702.39030K562POLR2G
NSA2ENSG00000164346.51983.853601476.767600.425804.047903.13900K562PRPF8
NSA2ENSG00000164346.51529.277501932.96930-0.338002.863701.94140K562PSIP1
NSA2ENSG00000164346.54523.436602608.829400.7939014.6135013.40400K562PUS1
NSA2ENSG00000164346.53242.458202541.826900.351104.939404.16810K562RBM15
NSA2ENSG00000164346.51250.033201763.58420-0.496506.377304.87480K562RCC2
NSA2ENSG00000164346.51534.094701918.11810-0.322302.394501.39250K562NELFE
NSA2ENSG00000164346.51435.101102090.72470-0.542905.704504.20050K562RPS3
NSA2ENSG00000164346.52868.685404090.36660-0.511803.040201.43750K562SBDS
NSA2ENSG00000164346.52373.685601794.064100.403805.204504.01030K562SF3B4
NSA2ENSG00000164346.51353.748401671.83070-0.304502.318601.39790K562SRFBP1
NSA2ENSG00000164346.52453.216403335.00680-0.443006.960605.55160K562SRPK2
NSA2ENSG00000164346.51485.110401863.45220-0.327403.156702.40590K562SRSF1
NSA2ENSG00000164346.51403.993601759.86790-0.325902.582001.57340K562SRSF5
NSA2ENSG00000164346.51101.440801430.03270-0.376702.418701.47250K562SUPV3L1
NSA2ENSG00000164346.52658.202802176.831000.288103.056302.19040K562SYNCRIP
NSA2ENSG00000164346.51526.111901885.95470-0.305402.227901.58840K562TARDBP
NSA2ENSG00000164346.51459.292501819.21120-0.318003.070202.20010K562TIA1
NSA2ENSG00000164346.51259.273501859.19310-0.562105.616804.23870K562TIAL1
NSA2ENSG00000164346.51444.213901785.14110-0.305802.395401.39350K562TRA2A
NSA2ENSG00000164346.51383.392401975.15250-0.513805.967704.45730K562TRIM56
NSA2ENSG00000164346.53224.318104050.41010-0.329102.705101.34370K562TRIP6
NSA2ENSG00000164346.52785.026303498.24330-0.328904.774403.85670K562UPF1
NSA2ENSG00000164346.52599.843803112.56970-0.259703.979402.97730K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NSA2 is not available on ENCORE database.





4 RBPs can affect the splicing of NSA2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENSA2ENSG00000164346.5chr5+740696927406981974066455740666357407242874072737-0.074000.000000.00000excludedK562AQR
SENSA2ENSG00000164346.5chr5+7406969274069885740664557406663574072428740727370.100000.000010.00107includedHepG2SFPQ
SENSA2ENSG00000164346.5chr5+740696927406981974066455740666357407242874072629-0.053000.002770.05172excludedK562U2AF1
SENSA2ENSG00000164346.5chr5+7406969274069885740664557406663574072428740727370.098000.000010.00532includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NSA2 is not avaliable on ENCORE database.