NOL3

General Information

Gene Name       : NOL3
Gene ID             : ENSG00000140939.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NOL3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NOL3ENSG00000140939.142.662.012.33ENCSR000AEF
HepG2NOL3ENSG00000140939.148.945.067.00ENCSR985KAT
K562NOL3ENSG00000140939.145.955.105.53ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NOL3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NOL3 RNA is bound by 15 proteins.  







eCLIP assay for NOL3 is not avaliable on ENCORE database.





15 proteins are bound to NOL3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr166720774867207821+3'-UTR,CDS,intron-Distal,intron-Proximal3.581813.69481K562UCHL5
chr166720778767207849+3'-UTR,CDS,intron-Distal,intron-Proximal4.256673.19125K562GTF2F1
chr166720784967207930+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.638325.10960K562ZNF622
chr166720793067207951+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.370763.62203K562DDX24
chr166720781467207951+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.128417.09278HepG2PPIG
chr166720772567207840+3'-UTR,CDS,intron-Distal,intron-Proximal3.320306.23791HepG2PRPF4
chr166720777167207886+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.8080010.79453K562DDX24
chr166720527167205334+5'-UTR,intron-Distal3.117124.51006K562CSTF2T
chr166720407767204133+5'-UTR,intron-Proximal4.073683.02181K562PRPF8
chr166720509067205140+5'-UTR,intron-Distal3.010173.20621K562HNRNPU
chr166720739467207527+intron-Distal3.166594.76316K562MTPAP
chr166720550567205555+intron-Distal3.972383.57928K562GTF2F1
chr166720741767207509+intron-Distal3.258424.33160K562FUS
chr166720463567204688+intron-Distal3.076703.15678K562AKAP8L
chr166720550467205587+intron-Distal4.036953.28462K562TAF15
chr166720615667206210+intron-Distal3.958387.16015K562HNRNPU
chr166720550167205586+intron-Distal3.556425.80077K562CSTF2T
chr166720477467204833+intron-Distal3.395316.42740K562CSTF2T
chr166720740467207467+intron-Distal4.535144.36078K562GTF2F1
chr166720583767205954+intron-Distal,intron-Proximal3.771656.71630HepG2PRPF4
chr166720476567204858+intron-Distal4.977367.21051K562PRPF8
chr166720587067205947+intron-Distal,intron-Proximal5.388627.33617K562GTF2F1
chr166720492767205025+intron-Distal,intron-Proximal3.373535.34585K562CSTF2T
chr166720550367205592+intron-Distal3.230125.49102K562HNRNPA1
chr166720477667204835+intron-Distal3.711965.23323K562GTF2F1
chr166720474167204837+intron-Distal3.286384.02266HepG2CSTF2T
chr166720583667205958+intron-Distal,intron-Proximal4.081823.73766K562SAFB
chr166720610967206193+intron-Distal5.434097.63549K562GTF2F1
chr166720468267204726+intron-Distal4.403633.77360K562GTF2F1
chr166720737267207542+intron-Distal3.002696.67457K562CSTF2T
chr166720467967204762+intron-Distal3.347434.98422K562PRPF8
chr166720551167205557+intron-Distal4.463305.14565K562UCHL5
chr166720459867204720+intron-Distal5.128228.30587HepG2PRPF4
chr166720609567206182+intron-Distal3.541305.35897HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NOL3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NOL3 is not available on ENCORE database.

  • 109 RBPs can affect the levels of NOL3.  








The Knockdown/knockout RNA-Seq assay for NOL3 is not available on ENCORE database.





109 RBPs can affect the gene expression of NOL3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NOL3ENSG00000140939.10308.62460399.25200-0.371402.054801.38100HepG2AKAP8L
NOL3ENSG00000140939.10197.24250279.14540-0.501002.113701.42210HepG2ASCC1
NOL3ENSG00000140939.10542.97680306.102100.8268010.750709.54560HepG2AUH
NOL3ENSG00000140939.10269.76300146.265500.883004.333103.23110HepG2BCLAF1
NOL3ENSG00000140939.10467.24510335.391700.478202.210201.34730HepG2CCAR1
NOL3ENSG00000140939.10209.11030397.29040-0.9259010.825509.68650HepG2CKAP4
NOL3ENSG00000140939.10192.58040344.34390-0.838404.252603.29830HepG2CNOT7
NOL3ENSG00000140939.10335.88600185.581200.855805.664404.71310HepG2CPSF6
NOL3ENSG00000140939.1053.15600103.96550-0.967803.310402.14250HepG2CSTF2
NOL3ENSG00000140939.10222.98740367.53880-0.720907.226405.98610HepG2DDX19B
NOL3ENSG00000140939.10156.56430251.74230-0.685203.667902.60550HepG2DDX24
NOL3ENSG00000140939.10571.01310277.629401.040308.787807.75090HepG2DDX6
NOL3ENSG00000140939.10239.60620380.21520-0.666205.273204.39250HepG2DKC1
NOL3ENSG00000140939.10238.55280165.865400.524202.650401.95850HepG2DNAJC21
NOL3ENSG00000140939.1097.16660241.27570-1.312208.596007.07410HepG2EEF2
NOL3ENSG00000140939.10672.69480266.873501.3337016.9561015.57590HepG2EIF2S1
NOL3ENSG00000140939.10127.65750195.84960-0.617502.559201.68550HepG2EIF3D
NOL3ENSG00000140939.10165.09180242.87950-0.557002.694901.62630HepG2EIF3G
NOL3ENSG00000140939.10238.36990388.31240-0.704005.428304.25810HepG2EWSR1
NOL3ENSG00000140939.10585.56780185.915301.655102.579701.60160HepG2FTO
NOL3ENSG00000140939.10352.16190250.489200.491402.547201.79200HepG2FUBP3
NOL3ENSG00000140939.10374.23050210.349700.831005.192304.33290HepG2GPKOW
NOL3ENSG00000140939.10221.38550161.125600.458302.087801.45860HepG2HNRNPF
NOL3ENSG00000140939.10434.97930352.107300.304801.876601.30710HepG2HNRNPL
NOL3ENSG00000140939.10419.63640200.742501.063704.899604.08620HepG2HNRNPLL
NOL3ENSG00000140939.10320.74690528.49930-0.720504.784703.18250HepG2HSPD1
NOL3ENSG00000140939.10222.38020158.662900.487002.163401.51830HepG2IGF2BP1
NOL3ENSG00000140939.10167.63650299.35220-0.836504.482003.69620HepG2MATR3
NOL3ENSG00000140939.10124.69620204.96550-0.717002.270101.31620HepG2METAP2
NOL3ENSG00000140939.10314.29700204.777300.618002.219101.35740HepG2MTPAP
NOL3ENSG00000140939.10399.16010256.038700.640503.027301.75820HepG2NAA15
NOL3ENSG00000140939.10222.70340306.40010-0.460301.857401.33170HepG2NCBP2
NOL3ENSG00000140939.1081.08160152.03620-0.907002.826101.72150HepG2NONO
NOL3ENSG00000140939.10413.22970178.011901.2149010.912309.51110HepG2NSUN2
NOL3ENSG00000140939.10373.58260272.852900.453202.148101.50590HepG2PABPC4
NOL3ENSG00000140939.10233.00510165.036400.497502.451001.75270HepG2PPIL4
NOL3ENSG00000140939.10184.11040388.38030-1.0769013.7971012.68430HepG2PUM1
NOL3ENSG00000140939.10208.73040404.79560-0.9556011.3391010.23680HepG2PUS1
NOL3ENSG00000140939.10117.55390234.46760-0.996103.943303.10670HepG2RAVER1
NOL3ENSG00000140939.10167.93050290.08130-0.788604.193102.95470HepG2RBM27
NOL3ENSG00000140939.10215.14830326.37170-0.601201.761701.30950HepG2NELFE
NOL3ENSG00000140939.10258.43890173.569700.574202.761202.07910HepG2RPLP0
NOL3ENSG00000140939.10130.98750230.31600-0.814203.538402.47170HepG2RPS10
NOL3ENSG00000140939.10113.09020190.58320-0.752903.457002.77840HepG2RPS19
NOL3ENSG00000140939.10128.72280267.54890-1.055506.446205.25530HepG2RPS2
NOL3ENSG00000140939.10219.89980345.82600-0.653203.241002.37680HepG2RPS3A
NOL3ENSG00000140939.10160.01360273.09100-0.771203.302302.12400HepG2RPS5
NOL3ENSG00000140939.1073.28130126.26820-0.785002.411001.67230HepG2RRP9
NOL3ENSG00000140939.10147.37480255.08420-0.791503.510301.78510HepG2RTF1
NOL3ENSG00000140939.10249.29800164.779400.597203.527602.81610HepG2SAFB2
NOL3ENSG00000140939.10199.12320445.50880-1.161809.698608.37550HepG2SF3A3
NOL3ENSG00000140939.10168.72280305.27450-0.855502.393001.83760HepG2SF3B4
NOL3ENSG00000140939.10134.00590192.15500-0.520002.420801.81370HepG2SMN1
NOL3ENSG00000140939.10509.21910331.757800.618106.352505.67760HepG2SRFBP1
NOL3ENSG00000140939.1090.48690318.67540-1.816307.372206.68630HepG2SRSF1
NOL3ENSG00000140939.10202.86340361.23500-0.832407.539206.57370HepG2SRSF5
NOL3ENSG00000140939.10243.41960158.300100.620703.608702.82960HepG2SRSF7
NOL3ENSG00000140939.10479.88920259.289400.888008.203107.34280HepG2SRSF9
NOL3ENSG00000140939.10259.67220410.83120-0.661906.015805.16240HepG2SUCLG1
NOL3ENSG00000140939.10372.62280254.335700.550902.595201.68390HepG2SUPT6H
NOL3ENSG00000140939.10274.21960517.19270-0.915404.266102.95930HepG2TBRG4
NOL3ENSG00000140939.10247.83190179.775900.463102.174101.71970HepG2TIAL1
NOL3ENSG00000140939.10127.85090235.42720-0.880803.837202.11770HepG2TRA2A
NOL3ENSG00000140939.10347.01250181.405700.935709.507308.55790HepG2TRIM56
NOL3ENSG00000140939.1083.25310155.61750-0.902403.785901.96180HepG2TROVE2
NOL3ENSG00000140939.10258.09060357.42800-0.469802.587901.74570HepG2TUFM
NOL3ENSG00000140939.10139.05210322.32860-1.212903.425902.73240HepG2U2AF1
NOL3ENSG00000140939.10171.23360381.45180-1.1555012.6145011.47660HepG2UTP3
NOL3ENSG00000140939.10130.77760257.85100-0.979405.343903.89410HepG2XRCC6
NOL3ENSG00000140939.10525.54320434.532400.274201.898801.42290HepG2ZNF622
NOL3ENSG00000140939.10147.00310234.25060-0.672202.908001.57410HepG2ZRANB2
NOL3ENSG00000140939.10563.68150320.443100.814707.543305.55110K562ABCF1
NOL3ENSG00000140939.10548.73080427.239900.361001.909601.40520K562AQR
NOL3ENSG00000140939.10308.20030202.388200.606603.786302.65390K562BCLAF1
NOL3ENSG00000140939.10583.18780240.707401.276606.429105.08790K562BOP1
NOL3ENSG00000140939.10233.68420150.471700.635003.196902.04650K562CCAR1
NOL3ENSG00000140939.10918.56810678.488700.437004.202702.71230K562CCDC124
NOL3ENSG00000140939.10363.10450254.063900.515102.910301.59400K562CIRBP
NOL3ENSG00000140939.10651.92990448.346500.540002.396101.41940K562CNOT7
NOL3ENSG00000140939.10459.92580255.913900.845607.817506.48920K562CPSF6
NOL3ENSG00000140939.10247.45600153.541700.688403.398402.20800K562CSTF2
NOL3ENSG00000140939.10568.66420398.427500.513204.367502.82270K562DDX21
NOL3ENSG00000140939.10292.75880168.462000.797204.787202.93900K562DHX30
NOL3ENSG00000140939.10417.69410635.69660-0.605906.312904.90430K562DKC1
NOL3ENSG00000140939.10251.76720161.804300.637702.647001.33650K562DNAJC21
NOL3ENSG00000140939.10367.96640276.398800.412702.483401.35050K562EIF2S1
NOL3ENSG00000140939.10390.59520230.443200.761202.719602.00560K562EIF2S2
NOL3ENSG00000140939.10660.85090452.887100.545104.883403.65200K562EIF4G2
NOL3ENSG00000140939.10490.65250260.438900.913708.076606.56920K562FMR1
NOL3ENSG00000140939.10554.01050220.768201.3273015.8063013.44320K562FTO
NOL3ENSG00000140939.10144.56260273.41790-0.919406.959206.06060K562FXR1
NOL3ENSG00000140939.10517.13750244.313101.081705.429504.32220K562GPKOW
NOL3ENSG00000140939.10361.98570253.243600.515303.194702.03850K562HNRNPA1
NOL3ENSG00000140939.10294.49270169.463200.797204.845704.07700K562HNRNPC
NOL3ENSG00000140939.10277.60860151.381600.874802.573801.47920K562HNRNPF
NOL3ENSG00000140939.10252.98730354.34840-0.486102.790301.73040K562HNRNPL
NOL3ENSG00000140939.10748.56750409.321300.870805.107703.13290K562ILF2
NOL3ENSG00000140939.10252.66920157.216600.684403.649001.91880K562ILF3
NOL3ENSG00000140939.10534.99000208.669801.3582012.7643010.63590K562KRR1
NOL3ENSG00000140939.10431.63820238.486000.855805.925004.61470K562METAP2
NOL3ENSG00000140939.10463.86630311.296300.575304.885403.83340K562MTPAP
NOL3ENSG00000140939.10561.94690345.921300.699908.542407.33360K562NSUN2
NOL3ENSG00000140939.10312.39630166.930700.904006.260003.84940K562NUSAP1
NOL3ENSG00000140939.10661.51790430.730300.618903.177801.84150K562PABPC1
NOL3ENSG00000140939.10327.58650165.487700.985104.015102.24550K562PHF6
NOL3ENSG00000140939.10416.10400277.469700.584503.554101.75480K562PKM
NOL3ENSG00000140939.1085.17010182.96840-1.103204.473203.52010K562PRPF8
NOL3ENSG00000140939.10301.74610151.955600.989606.669505.16220K562PSIP1
NOL3ENSG00000140939.10160.09390242.06250-0.596503.243602.53040K562PTBP1
NOL3ENSG00000140939.10792.28660514.948600.621506.601205.10280K562PUM2
NOL3ENSG00000140939.10440.19400570.86280-0.375002.444301.88070K562RBM15
NOL3ENSG00000140939.10153.94880269.29510-0.806704.817903.38790K562SAFB
NOL3ENSG00000140939.10446.44980341.271800.387502.142201.41720K562SF3A3
NOL3ENSG00000140939.10439.84090232.429500.920106.736405.17720K562SF3B1
NOL3ENSG00000140939.10271.87980165.713300.714204.077602.52540K562SLBP
NOL3ENSG00000140939.10228.50980131.484300.797304.043002.72900K562SRFBP1
NOL3ENSG00000140939.10467.33850349.634600.418502.981302.01560K562SRPK2
NOL3ENSG00000140939.10460.31380355.561200.372402.411901.32260K562SRSF7
NOL3ENSG00000140939.10433.45260276.423500.648904.311802.68460K562STAU1
NOL3ENSG00000140939.10280.73530177.031900.665102.871801.83610K562SUPV3L1
NOL3ENSG00000140939.10135.92390303.11590-1.1571010.411508.81350K562SYNCRIP
NOL3ENSG00000140939.10352.54920231.657900.605703.905102.91010K562TIA1
NOL3ENSG00000140939.10343.26740146.147601.231808.113906.44400K562TIAL1
NOL3ENSG00000140939.10321.47740155.338901.049207.881906.09260K562TRIM56
NOL3ENSG00000140939.10392.42530269.348600.542802.787301.40290K562TRIP6
NOL3ENSG00000140939.10314.87840187.427000.748403.473902.32530K562UCHL5
NOL3ENSG00000140939.10649.72590366.784200.824805.920804.91500K562UPF1
NOL3ENSG00000140939.10533.44220379.628300.490602.423901.30800K562UTP3
NOL3ENSG00000140939.10457.44770313.851300.543403.578902.58540K562WDR3
NOL3ENSG00000140939.10782.60020481.215400.701507.792306.22330K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NOL3 is not available on ENCORE database.





3 RBPs can affect the splicing of NOL3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENOL3ENSG00000140939.10chr16+672077646720794967204404672044776720806467208367-0.218000.002550.06318excludedHepG2SF3A3
MXENOL3ENSG00000140939.10chr16+6720505467205360672077646720794967204404672044776720806467208367-0.441000.001230.034572includedHepG2MATR3
MXENOL3ENSG00000140939.10chr16+6720505467205360672077646720794967204404672044776720806467208367-0.404000.001670.053702includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NOL3 is not avaliable on ENCORE database.