NMT2

General Information

Gene Name       : NMT2
Gene ID             : ENSG00000152465.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NMT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NMT2ENSG00000152465.177.537.157.34ENCSR000AEF
HepG2NMT2ENSG00000152465.1712.9018.4015.65ENCSR985KAT
K562NMT2ENSG00000152465.179.279.919.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NMT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NMT2 RNA is bound by 18 proteins.  







eCLIP assay for NMT2 is not avaliable on ENCORE database.





18 proteins are bound to NMT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr101517504815175125-3'-UTR,CDS,intron-Distal,intron-Proximal4.567326.56507HepG2GRWD1
chr101515118315151241-3'-UTR,CDS,intron-Distal3.999143.95921HepG2U2AF2
chr101518341815183445-5'-UTR,CDS,intron-Distal,intron-Proximal4.534648.15024HepG2BCLAF1
chr101521050115210625-5'-UTR,CDS,intron-Distal,intron-Proximal4.119853.80401K562SRSF1
chr101518342415183522-5'-UTR,CDS,intron-Distal,intron-Proximal5.077897.64336HepG2GRWD1
chr101517737015177419-5'-UTR,CDS,intron-Distal,intron-Proximal4.430567.16838HepG2BCLAF1
chr101518342515183530-5'-UTR,CDS,intron-Distal,intron-Proximal3.528214.77481HepG2BUD13
chr101518344815183570-5'-UTR,CDS,intron-Distal,intron-Proximal4.729054.97857HepG2AQR
chr101518344415183563-5'-UTR,CDS,intron-Distal,intron-Proximal3.265453.49055K562GRWD1
chr101521054715210682-5'-UTR,CDS,intron-Distal,intron-Proximal4.829386.40909HepG2NCBP2
chr101518342015183554-5'-UTR,CDS,intron-Distal,intron-Proximal3.762115.76403K562UCHL5
chr101518345615183557-5'-UTR,CDS,intron-Distal,intron-Proximal5.012204.66217K562ZNF800
chr101518342515183531-5'-UTR,CDS,intron-Distal,intron-Proximal4.856376.46917K562ZNF622
chr101518346515183541-5'-UTR,CDS,intron-Distal3.450117.01246HepG2BCLAF1
chr101517727215177408-5'-UTR,CDS,intron-Distal,intron-Proximal3.936845.08507K562ZNF622
chr101517731315177370-5'-UTR,CDS,intron-Distal3.206114.56058HepG2BCLAF1
chr101515176215151791-CDS,intron-Distal3.469143.87469HepG2BCLAF1
chr101517224215172312-CDS,intron-Distal,intron-Proximal4.319365.79432HepG2BCLAF1
chr101517489515174935-CDS,intron-Distal,intron-Proximal3.142984.51003HepG2PPIG
chr101517481415174862-CDS,intron-Distal,intron-Proximal4.080344.93978HepG2BCLAF1
chr101516137115161446-CDS,intron-Distal,intron-Proximal4.319366.23296HepG2BCLAF1
chr101516135415161447-CDS,intron-Distal,intron-Proximal3.145945.74981HepG2GRWD1
chr101515171615151796-CDS,intron-Distal3.215043.80299HepG2GRWD1
chr101517504515175084-CDS,intron-Distal,intron-Proximal3.922595.36555HepG2BCLAF1
chr101517504915175087-CDS,intron-Distal,intron-Proximal3.499723.93645HepG2PPIG
chr101515171115151745-CDS,intron-Distal3.176663.55800HepG2BCLAF1
chr101517819415178255-intron-Distal4.5636710.46790HepG2PCBP2
chr101517838815178486-intron-Distal4.145065.38800HepG2PCBP2
chr101517826115178332-intron-Distal5.098596.76922HepG2PTBP1
chr101519130315191384-intron-Distal5.146846.73731K562EXOSC5
chr101517778415177902-intron-Distal4.211807.80454K562PTBP1
chr101515808515158179-intron-Distal4.669874.78128HepG2SUGP2
chr101521018115210261-intron-Distal3.023026.35099HepG2XPO5
chr101518324915183342-intron-Distal,intron-Proximal4.127143.85435K562PRPF8
chr101517819415178246-intron-Distal4.259565.65979HepG2PTBP1
chr101514542515145573-intron-Distal6.1515711.75303HepG2U2AF2
chr101515833215158380-intron-Distal4.341033.30687K562EXOSC5
chr101515903115159140-intron-Distal3.733483.59523HepG2SUGP2
chr101517783515177903-intron-Distal4.9154213.97042HepG2PTBP1
chr101517780315177835-intron-Distal4.076833.59803HepG2PTBP1
chr101515848715158523-intron-Distal4.507025.12361K562EXOSC5
chr101515858715158647-intron-Distal4.581215.44508K562EXOSC5
chr101514528115145375-intron-Distal4.903787.71151HepG2GRWD1
chr101515787315157930-intron-Distal3.306913.59523HepG2SUGP2
chr101516011115160223-intron-Distal3.776544.83406HepG2QKI
chr101519123415191267-intron-Distal4.064763.30696K562EXOSC5
chr101519110915191203-intron-Distal5.111317.71416K562EXOSC5
chr101517782115177890-intron-Distal4.107404.62831HepG2PCBP2
chr101519147715191564-intron-Distal4.807476.08953K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NMT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NMT2 is not available on ENCORE database.

  • 65 RBPs can affect the levels of NMT2.  








The Knockdown/knockout RNA-Seq assay for NMT2 is not available on ENCORE database.





65 RBPs can affect the gene expression of NMT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NMT2ENSG00000152465.13368.54780517.67390-0.490204.583903.83870HepG2ACO1
NMT2ENSG00000152465.13500.07800811.29010-0.698105.262804.55800HepG2AKAP1
NMT2ENSG00000152465.13422.43920520.11680-0.300101.962701.30210HepG2AKAP8L
NMT2ENSG00000152465.13368.40240517.57430-0.490504.665803.84590HepG2CKAP4
NMT2ENSG00000152465.13252.02630594.48210-1.2381010.002308.58030HepG2CNOT7
NMT2ENSG00000152465.13492.27750667.58040-0.439502.436301.85320HepG2DDX6
NMT2ENSG00000152465.13382.71000495.27700-0.372002.499501.85080HepG2DKC1
NMT2ENSG00000152465.13973.13480693.723500.488203.712502.77780HepG2EIF4G2
NMT2ENSG00000152465.13571.73850847.53020-0.567903.125502.49280HepG2ETF1
NMT2ENSG00000152465.13355.51390505.87130-0.508903.698402.73360HepG2EWSR1
NMT2ENSG00000152465.13353.60500546.42990-0.627904.082403.16230HepG2FIP1L1
NMT2ENSG00000152465.13498.68060715.57740-0.521003.545002.76850HepG2FXR1
NMT2ENSG00000152465.13210.56230303.47500-0.527302.807101.90190HepG2GEMIN5
NMT2ENSG00000152465.13315.62850452.82090-0.520703.026401.95820HepG2GNB2L1
NMT2ENSG00000152465.13332.11440550.34510-0.728704.407003.00810HepG2GRSF1
NMT2ENSG00000152465.13265.28190398.96940-0.588803.570102.84870HepG2HNRNPA1
NMT2ENSG00000152465.13901.01890674.642900.417304.084402.98390HepG2HNRNPA2B1
NMT2ENSG00000152465.13429.20200313.269300.454202.870002.14110HepG2HNRNPF
NMT2ENSG00000152465.13535.83630668.82980-0.319802.662202.00100HepG2HNRNPL
NMT2ENSG00000152465.13383.55910260.963700.555502.888802.24780HepG2HNRNPLL
NMT2ENSG00000152465.13272.05510376.97900-0.470602.697001.75700HepG2HNRNPM
NMT2ENSG00000152465.13415.83620308.474700.430802.224301.57080HepG2IGF2BP1
NMT2ENSG00000152465.13517.12980674.76010-0.383802.218101.60540HepG2IGF2BP2
NMT2ENSG00000152465.131091.47800678.684200.685405.328003.89500HepG2KHSRP
NMT2ENSG00000152465.13444.77170606.49000-0.447402.157701.43180HepG2LARP4
NMT2ENSG00000152465.13542.10680715.82710-0.401002.272201.67550HepG2MAGOH
NMT2ENSG00000152465.13459.76360719.83770-0.646804.639603.83960HepG2MATR3
NMT2ENSG00000152465.13466.19850727.99650-0.643006.371605.21650HepG2NOL12
NMT2ENSG00000152465.13355.97640231.423000.621103.269902.45710HepG2NSUN2
NMT2ENSG00000152465.13281.06980436.36820-0.634605.729204.57180HepG2PARN
NMT2ENSG00000152465.13490.69260684.05860-0.479304.855604.08700HepG2PCBP1
NMT2ENSG00000152465.13478.58460696.07400-0.540506.000705.25760HepG2PTBP1
NMT2ENSG00000152465.13538.29030694.88780-0.368402.718702.12700HepG2PUF60
NMT2ENSG00000152465.13432.94400737.59720-0.7687010.592109.59150HepG2PUM1
NMT2ENSG00000152465.13581.41600737.09380-0.342302.764002.09340HepG2PUM2
NMT2ENSG00000152465.13226.04800491.72420-1.121206.830105.74820HepG2RAVER1
NMT2ENSG00000152465.13368.99370708.39680-0.941006.918306.18670HepG2RBM22
NMT2ENSG00000152465.13553.25490774.64790-0.485604.956604.26850HepG2NELFE
NMT2ENSG00000152465.13117.94500331.66150-1.4916015.6223014.32780HepG2RPS19
NMT2ENSG00000152465.13310.67340493.37220-0.667304.832803.79310HepG2RPS2
NMT2ENSG00000152465.13433.88220597.09270-0.460702.278301.55100HepG2RPS3A
NMT2ENSG00000152465.13348.32560570.84450-0.712704.871303.95980HepG2SF3A3
NMT2ENSG00000152465.13529.36410724.66920-0.453104.401403.68190HepG2SF3B4
NMT2ENSG00000152465.13239.17890457.84300-0.9368012.4079011.19890HepG2SMN1
NMT2ENSG00000152465.13599.04830756.41150-0.336502.785302.31080HepG2SRSF1
NMT2ENSG00000152465.13422.69730686.03240-0.698709.206408.15310HepG2SRSF5
NMT2ENSG00000152465.13425.84670307.797700.468303.009202.28830HepG2SRSF7
NMT2ENSG00000152465.13881.49650615.392900.518307.150806.33820HepG2SRSF9
NMT2ENSG00000152465.13446.58530780.26610-0.805008.991307.97880HepG2SUCLG1
NMT2ENSG00000152465.13235.99470428.41790-0.860307.286706.54560HepG2TIAL1
NMT2ENSG00000152465.13296.19020432.17170-0.545104.751004.05250HepG2TRIM56
NMT2ENSG00000152465.13512.11840678.78310-0.406502.269901.48410HepG2TUFM
NMT2ENSG00000152465.13360.76830467.40430-0.373601.864701.33790HepG2U2AF1
NMT2ENSG00000152465.13331.47670488.76650-0.560204.841704.08560HepG2UTP3
NMT2ENSG00000152465.13288.92860540.73470-0.904206.556004.97570HepG2XRCC6
NMT2ENSG00000152465.13368.96250556.78020-0.593606.952906.18840HepG2ZNF622
NMT2ENSG00000152465.13561.11830450.150100.317802.161501.64930K562AGGF1
NMT2ENSG00000152465.13259.48490352.70180-0.442802.047001.52690K562AQR
NMT2ENSG00000152465.13122.26760203.35850-0.734003.277502.27830K562EFTUD2
NMT2ENSG00000152465.13455.56220227.945400.9989012.0222010.67720K562EIF2S2
NMT2ENSG00000152465.13189.68470300.06650-0.661704.372203.63570K562FXR1
NMT2ENSG00000152465.13431.82860255.210600.758702.792701.56630K562HNRNPA2B1
NMT2ENSG00000152465.13104.94440192.05150-0.871904.091803.38110K562HNRNPC
NMT2ENSG00000152465.13496.11650269.156100.882107.905006.57640K562HSPD1
NMT2ENSG00000152465.13226.14400305.24180-0.432702.128401.38700K562MAGOH
NMT2ENSG00000152465.13478.12020265.247400.849903.205601.58970K562PPP1R8
NMT2ENSG00000152465.13203.85130296.56220-0.540803.164402.45900K562PTBP1
NMT2ENSG00000152465.13205.63730284.36280-0.467602.265801.50990K562RBM22
NMT2ENSG00000152465.13188.24410294.23640-0.644403.621602.80760K562TARDBP
NMT2ENSG00000152465.13403.63210286.043800.496703.622302.80810K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NMT2 is not available on ENCORE database.





14 RBPs can affect the splicing of NMT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.191000.001110.08293includedHepG2G3BP1
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.233000.000000.00344includedHepG2NKRF
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.304000.000350.00838includedHepG2U2AF1
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.281000.000720.06102includedK562XRCC6
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.230000.000010.00120includedHepG2TBRG4
SENMT2ENSG00000152465.13chr10-1515103815151214151483711514869715151700151518380.276000.001230.08899includedHepG2QKI
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.425000.000000.00001includedHepG2U2AF2
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.191000.002000.02194includedK562AQR
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.235000.000120.01475includedHepG2DDX3X
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.304000.002510.08783includedHepG2SFPQ
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.170000.000230.03196includedHepG2LARP4
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.212000.000340.03034includedHepG2IGF2BP3
SENMT2ENSG00000152465.13chr10-1515103815151214151483711514869715151700151518380.302000.000830.05318includedHepG2SRSF9
SENMT2ENSG00000152465.13chr10-1518298515183028151772721517741715183420151835560.276000.000480.01043includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NMT2 is not avaliable on ENCORE database.