NFKB2

General Information

Gene Name       : NFKB2
Gene ID             : ENSG00000077150.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NFKB2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NFKB2ENSG00000077150.1831.4838.3534.91ENCSR000AEF
HepG2NFKB2ENSG00000077150.189.698.659.17ENCSR985KAT
K562NFKB2ENSG00000077150.188.256.327.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NFKB2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NFKB2 RNA is bound by 6 proteins.  







eCLIP assay for NFKB2 is not avaliable on ENCORE database.





6 proteins are bound to NFKB2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10104162138104162204+3'-UTR4.650327.14884K562PUM2
chr10104160081104160126+CDS3.478934.13746HepG2PPIG
chr10104158524104158622+CDS,intron-Proximal4.474114.77725HepG2GRSF1
chr10104160234104160309+CDS,intron-Proximal4.220176.95612HepG2PRPF8
chr10104158506104158620+CDS3.271415.21025HepG2PPIG
chr10104158000104158050+CDS3.231423.99124HepG2PPIG
chr10104158383104158457+intron-Distal,intron-Proximal3.289234.05505HepG2SF3B4
chr10104156274104156357+intron-Distal,intron-Proximal4.090386.87873HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NFKB2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NFKB2 is not available on ENCORE database.

  • 104 RBPs can affect the levels of NFKB2.  








The Knockdown/knockout RNA-Seq assay for NFKB2 is not available on ENCORE database.





104 RBPs can affect the gene expression of NFKB2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NFKB2ENSG00000077150.13345.48250571.44620-0.726005.036103.80420HepG2ABCF1
NFKB2ENSG00000077150.13766.29870559.008700.454905.249904.46520HepG2ACO1
NFKB2ENSG00000077150.13219.33220313.81280-0.516802.577001.61490HepG2ADAR
NFKB2ENSG00000077150.13814.58140561.679900.536206.727305.58640HepG2AKAP8L
NFKB2ENSG00000077150.13490.21440331.490500.564302.542101.64670HepG2BCCIP
NFKB2ENSG00000077150.13329.95990475.15510-0.526103.104702.28770HepG2CIRBP
NFKB2ENSG00000077150.13739.33750558.941100.403404.344403.54690HepG2CKAP4
NFKB2ENSG00000077150.13501.98730325.248300.626002.962402.16820HepG2CNOT7
NFKB2ENSG00000077150.13534.27220357.664500.578903.888503.08580HepG2CPSF6
NFKB2ENSG00000077150.13695.07130489.160700.506805.587804.73480HepG2CELF1
NFKB2ENSG00000077150.13686.20170525.878900.383804.205903.32180HepG2DAZAP1
NFKB2ENSG00000077150.13217.72240299.57790-0.460402.181101.38110HepG2DDX24
NFKB2ENSG00000077150.13495.20700325.944400.603302.914502.12370HepG2DDX55
NFKB2ENSG00000077150.13673.62920497.465100.437302.425701.84380HepG2DDX6
NFKB2ENSG00000077150.13399.91870534.83380-0.419403.220702.49970HepG2DKC1
NFKB2ENSG00000077150.13410.21750315.970300.376502.316701.66710HepG2DNAJC21
NFKB2ENSG00000077150.13530.37480313.235100.7597010.410009.24250HepG2DNAJC2
NFKB2ENSG00000077150.13211.09530358.47790-0.764004.732003.55510HepG2EEF2
NFKB2ENSG00000077150.13698.59740478.119100.547003.870203.17560HepG2EIF2S1
NFKB2ENSG00000077150.13204.14490289.05130-0.501702.562901.52400HepG2EIF3G
NFKB2ENSG00000077150.13365.77030528.32650-0.530503.121302.44330HepG2EIF4A3
NFKB2ENSG00000077150.13975.59810514.498000.923007.878806.74770HepG2EIF4B
NFKB2ENSG00000077150.13310.41910495.04600-0.673304.931803.51340HepG2ESF1
NFKB2ENSG00000077150.13823.73840577.032700.513403.312702.47740HepG2FIP1L1
NFKB2ENSG00000077150.13169.43660271.27530-0.679003.474102.06210HepG2FKBP4
NFKB2ENSG00000077150.13364.56140525.13830-0.526503.280502.30540HepG2G3BP2
NFKB2ENSG00000077150.13297.84840405.39870-0.444802.065501.50780HepG2GPKOW
NFKB2ENSG00000077150.13453.07870275.308600.718602.655101.31970HepG2HNRNPA0
NFKB2ENSG00000077150.13452.39530268.813500.750904.895103.01180HepG2HNRNPAB
NFKB2ENSG00000077150.13824.65070500.970600.719007.030305.95290HepG2HNRNPK
NFKB2ENSG00000077150.13626.91790479.008400.388104.006303.20710HepG2HNRNPL
NFKB2ENSG00000077150.13547.06300386.883200.499703.002502.35070HepG2HNRNPLL
NFKB2ENSG00000077150.13918.44700471.854300.960802.557501.61450HepG2IGF2BP3
NFKB2ENSG00000077150.13541.09610360.061000.587506.983405.87300HepG2ILF2
NFKB2ENSG00000077150.13562.67310317.130400.827105.484503.58390HepG2ILF3
NFKB2ENSG00000077150.13543.58940310.195500.809206.011804.15540HepG2KHDRBS1
NFKB2ENSG00000077150.13458.97850670.17410-0.546103.298202.38930HepG2LARP4
NFKB2ENSG00000077150.13301.79430533.40150-0.821706.686305.67980HepG2MAGOH
NFKB2ENSG00000077150.13832.45610297.364601.4850014.0007011.96530HepG2PABPC1
NFKB2ENSG00000077150.131012.69580506.979100.9981022.4022020.94730HepG2PCBP1
NFKB2ENSG00000077150.13491.93290291.737300.753703.166001.53810HepG2PNPT1
NFKB2ENSG00000077150.13195.49580389.10690-0.9930010.939609.55080HepG2PRPF4
NFKB2ENSG00000077150.13183.75360313.18200-0.769203.700202.29880HepG2PRPF6
NFKB2ENSG00000077150.13681.38860515.866600.401403.492202.89290HepG2PTBP1
NFKB2ENSG00000077150.13284.67710497.80880-0.806307.101206.20220HepG2PUF60
NFKB2ENSG00000077150.13934.49540528.474900.8223018.5866017.32610HepG2PUM1
NFKB2ENSG00000077150.13678.50330528.070900.361502.669902.01120HepG2PUM2
NFKB2ENSG00000077150.13921.92490635.393600.536905.973704.77280HepG2RBM15
NFKB2ENSG00000077150.13758.59420618.989200.293302.000201.54090HepG2RBM22
NFKB2ENSG00000077150.13390.63970574.11290-0.555505.127204.42750HepG2NELFE
NFKB2ENSG00000077150.13385.30680534.70280-0.472703.880303.16700HepG2RECQL
NFKB2ENSG00000077150.13198.47860283.16110-0.512602.586501.99100HepG2RPS19
NFKB2ENSG00000077150.13266.61540578.24190-1.116909.499208.19340HepG2SF3A3
NFKB2ENSG00000077150.13656.00790537.090100.288401.978301.46440HepG2SF3B4
NFKB2ENSG00000077150.13583.24760283.913101.038602.833301.36280HepG2SFPQ
NFKB2ENSG00000077150.13604.05300477.380300.339403.044902.31320HepG2SLBP
NFKB2ENSG00000077150.13662.02780293.598101.1729011.686909.65170HepG2SMNDC1
NFKB2ENSG00000077150.13517.83920261.493200.985602.932101.57520HepG2SNRNP200
NFKB2ENSG00000077150.13284.82510426.06740-0.581002.566201.81470HepG2SNRNP70
NFKB2ENSG00000077150.131150.92520699.099200.7191013.5272012.64180HepG2SRFBP1
NFKB2ENSG00000077150.13478.11180384.411400.314602.020701.41520HepG2SRSF7
NFKB2ENSG00000077150.13635.67720456.078300.478904.908104.21170HepG2SRSF9
NFKB2ENSG00000077150.13353.74060606.93750-0.778909.529508.68880HepG2SSB
NFKB2ENSG00000077150.13554.34620385.456600.524103.197801.87530HepG2STAU1
NFKB2ENSG00000077150.13591.83990284.430401.057009.865907.67220HepG2STIP1
NFKB2ENSG00000077150.13649.88430389.674800.737807.666206.15580HepG2SUPT6H
NFKB2ENSG00000077150.13658.90980324.440901.022008.427307.35280HepG2SUPV3L1
NFKB2ENSG00000077150.13332.82310503.88470-0.598305.357004.61940HepG2TAF15
NFKB2ENSG00000077150.13578.86470377.202400.617804.653303.74650HepG2TARDBP
NFKB2ENSG00000077150.13601.61600463.009100.377702.285501.52360HepG2TIA1
NFKB2ENSG00000077150.13549.97460345.583100.670207.878407.00530HepG2TRIM56
NFKB2ENSG00000077150.13612.80760303.926401.011602.859801.85380HepG2U2AF2
NFKB2ENSG00000077150.131180.65780514.862201.197207.956906.50940HepG2UBE2L3
NFKB2ENSG00000077150.13368.59850527.08190-0.516004.309603.03590HepG2UTP18
NFKB2ENSG00000077150.13248.88380495.09840-0.9922010.571909.52260HepG2UTP3
NFKB2ENSG00000077150.13340.75840632.85760-0.893105.275504.51020K562AQR
NFKB2ENSG00000077150.13279.34020203.364300.457902.109801.41600K562CPSF6
NFKB2ENSG00000077150.13201.87520320.47200-0.666703.537001.42450K562YBX3
NFKB2ENSG00000077150.13625.84430867.23080-0.470604.448503.20250K562CELF1
NFKB2ENSG00000077150.13337.28320555.05590-0.718705.511904.63820K562DDX47
NFKB2ENSG00000077150.131283.612601000.848100.358903.938502.86950K562DKC1
NFKB2ENSG00000077150.13143.41960287.30900-1.002403.750502.23090K562EEF2
NFKB2ENSG00000077150.13495.09260337.145100.554203.991303.15230K562EIF2S2
NFKB2ENSG00000077150.13144.43370298.44660-1.047105.065203.66610K562EIF3A
NFKB2ENSG00000077150.13182.16460296.99640-0.705202.441301.47610K562EIF3D
NFKB2ENSG00000077150.13157.47450244.02350-0.631903.430802.55040K562EIF3G
NFKB2ENSG00000077150.13332.98050439.76580-0.401302.222801.48400K562EIF4A3
NFKB2ENSG00000077150.13427.81370705.12240-0.720909.352107.66170K562EIF4G2
NFKB2ENSG00000077150.13184.93800288.92450-0.643703.271402.02650K562FKBP4
NFKB2ENSG00000077150.13339.22920457.33790-0.431002.954202.33180K562FXR1
NFKB2ENSG00000077150.13104.48880219.76700-1.072605.752804.65010K562G3BP2
NFKB2ENSG00000077150.13360.22000523.89890-0.540403.546602.25710K562GLRX3
NFKB2ENSG00000077150.13277.01070194.176700.512502.359001.62400K562GPKOW
NFKB2ENSG00000077150.13396.85930547.71010-0.464803.419502.22150K562HNRNPA1
NFKB2ENSG00000077150.13513.91690323.558200.667405.054703.99180K562HSPD1
NFKB2ENSG00000077150.13558.45490363.094300.621005.414603.64870K562IGF2BP3
NFKB2ENSG00000077150.13766.00970987.03760-0.365702.779301.95160K562KIF1C
NFKB2ENSG00000077150.13291.40460550.81680-0.9185012.4751010.90280K562MTPAP
NFKB2ENSG00000077150.13558.12710775.03160-0.473702.574601.72910K562NAA15
NFKB2ENSG00000077150.13546.42320771.37280-0.497404.158302.30870K562NOL12
NFKB2ENSG00000077150.13501.13370611.97640-0.288302.106401.44540K562NSUN2
NFKB2ENSG00000077150.13237.46170436.09750-0.877006.610505.32040K562PCBP3
NFKB2ENSG00000077150.13200.85340334.49950-0.735905.046903.96280K562POLR2G
NFKB2ENSG00000077150.13384.52380270.910300.505202.885002.04560K562PPIG
NFKB2ENSG00000077150.13495.03200298.260400.730805.746904.37040K562PSIP1
NFKB2ENSG00000077150.13465.85610364.449300.354102.104901.51160K562PTBP1
NFKB2ENSG00000077150.13244.35820503.88860-1.044106.900704.34290K562RPS3A
NFKB2ENSG00000077150.13299.78510603.91000-1.0104014.7300012.95350K562SF3A3
NFKB2ENSG00000077150.13495.13860618.72290-0.321502.446401.56030K562SRPK2
NFKB2ENSG00000077150.13419.61090305.519600.457702.465701.47950K562SRSF4
NFKB2ENSG00000077150.13532.46800337.465600.657905.440903.88070K562SRSF5
NFKB2ENSG00000077150.13234.26750335.51470-0.518203.057002.19090K562SYNCRIP
NFKB2ENSG00000077150.13534.76540361.579200.564504.058803.19550K562TARDBP
NFKB2ENSG00000077150.13543.79990348.790500.640602.282801.54620K562TIA1
NFKB2ENSG00000077150.13529.89300342.326800.630204.806203.29110K562TRA2A
NFKB2ENSG00000077150.13149.08320219.97280-0.561202.078101.38330K562U2AF2
NFKB2ENSG00000077150.13443.35770648.89400-0.549505.936904.92950K562UPF1
NFKB2ENSG00000077150.13266.26280577.40620-1.1167019.4473017.50670K562WDR43
NFKB2ENSG00000077150.13540.39290712.79370-0.399502.174901.42040K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NFKB2 is not available on ENCORE database.





2 RBPs can affect the splicing of NFKB2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSNFKB2ENSG00000077150.13chr10+1041611811041612751041612051041612751041609361041610880.106000.009540.05080longerK562AQR
MXENFKB2ENSG00000077150.13chr10+1041613771041614671041615011041616741041612051041612751041618041041619160.259000.006350.082761includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NFKB2 is not avaliable on ENCORE database.