N6AMT1

General Information

Gene Name       : N6AMT1
Gene ID             : ENSG00000156239.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: N6AMT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878N6AMT1ENSG00000156239.113.513.153.33ENCSR000AEF
HepG2N6AMT1ENSG00000156239.116.356.106.22ENCSR985KAT
K562N6AMT1ENSG00000156239.118.947.998.46ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for N6AMT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • N6AMT1 RNA is bound by 1 proteins.  







eCLIP assay for N6AMT1 is not avaliable on ENCORE database.





1 proteins are bound to N6AMT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr213024866130248769-3'-UTR,CDS,intron-Distal3.796395.56491HepG2BCLAF1
chr213025450530254560-CDS,intron-Distal4.198863.38968HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for N6AMT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for N6AMT1 is not available on ENCORE database.

  • 73 RBPs can affect the levels of N6AMT1.  








The Knockdown/knockout RNA-Seq assay for N6AMT1 is not available on ENCORE database.





73 RBPs can affect the gene expression of N6AMT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
N6AMT1ENSG00000156239.7365.19000230.010600.666803.280002.25620HepG2ABCF1
N6AMT1ENSG00000156239.7149.15930247.13380-0.728404.889804.12480HepG2ACO1
N6AMT1ENSG00000156239.7274.02200169.325000.694403.780003.09200HepG2BOP1
N6AMT1ENSG00000156239.7337.71760204.028800.726902.476201.75680HepG2CNOT7
N6AMT1ENSG00000156239.7109.67690179.24370-0.708703.336602.56940HepG2DNAJC21
N6AMT1ENSG00000156239.7277.63510180.302200.622702.924202.26710HepG2EIF4A3
N6AMT1ENSG00000156239.7349.58920243.660700.520703.378902.46930HepG2EIF4G1
N6AMT1ENSG00000156239.7147.61450224.95770-0.607803.221602.49860HepG2HNRNPL
N6AMT1ENSG00000156239.7135.20100199.95180-0.564502.838702.22440HepG2HNRNPU
N6AMT1ENSG00000156239.7410.09070246.582900.733804.327303.28190HepG2LARP4
N6AMT1ENSG00000156239.7263.74820182.014200.535002.198601.61150HepG2MAGOH
N6AMT1ENSG00000156239.7164.47990244.88840-0.574202.910802.12910HepG2NOL12
N6AMT1ENSG00000156239.756.73510186.39570-1.716104.190103.08270HepG2PABPC1
N6AMT1ENSG00000156239.7256.48140166.813400.620502.855302.12270HepG2PABPC4
N6AMT1ENSG00000156239.7243.60920177.535700.456402.309101.74450HepG2PCBP1
N6AMT1ENSG00000156239.7206.95260139.100300.573102.083401.37830HepG2PRPF8
N6AMT1ENSG00000156239.7256.06870180.667100.503102.865302.31030HepG2PTBP1
N6AMT1ENSG00000156239.7177.31180247.98150-0.483902.093901.50540HepG2PUM2
N6AMT1ENSG00000156239.7344.30770195.628800.815506.333005.44300HepG2QKI
N6AMT1ENSG00000156239.7149.65190307.90450-1.040906.476505.23180HepG2RBM15
N6AMT1ENSG00000156239.7442.35530292.745200.595504.716904.08620HepG2RBM22
N6AMT1ENSG00000156239.7333.48380177.560100.909207.260706.21160HepG2RBM25
N6AMT1ENSG00000156239.7266.70300187.278000.510002.721002.10890HepG2RECQL
N6AMT1ENSG00000156239.7257.44850181.578300.503602.183101.56730HepG2RPLP0
N6AMT1ENSG00000156239.776.93750120.86000-0.651601.979501.45130HepG2RPS19
N6AMT1ENSG00000156239.7110.98070178.06770-0.682103.268502.57890HepG2SAFB2
N6AMT1ENSG00000156239.7192.19700267.80280-0.478601.972701.40150HepG2SF3A3
N6AMT1ENSG00000156239.7138.74250207.66010-0.581802.968302.30550HepG2SMN1
N6AMT1ENSG00000156239.7426.01270287.072100.569404.747304.11140HepG2SSB
N6AMT1ENSG00000156239.7255.09010163.904800.638003.103702.34170HepG2TARDBP
N6AMT1ENSG00000156239.795.26850196.02660-1.041007.309206.46890HepG2TRIM56
N6AMT1ENSG00000156239.7174.06240261.20440-0.585603.691903.08480HepG2ZNF622
N6AMT1ENSG00000156239.7534.00590916.03990-0.7786012.8943011.76670K562AGGF1
N6AMT1ENSG00000156239.7778.888001006.55890-0.369902.882301.87370K562AKAP8
N6AMT1ENSG00000156239.7570.49060953.17350-0.740508.881007.63730K562AKAP8L
N6AMT1ENSG00000156239.7470.25000895.26030-0.9289011.0983010.03830K562AQR
N6AMT1ENSG00000156239.7791.694001074.76490-0.441003.677001.98520K562DDX19B
N6AMT1ENSG00000156239.7857.470801025.72990-0.258502.151601.38990K562DKC1
N6AMT1ENSG00000156239.7293.66730451.85730-0.621704.309503.32730K562EIF3G
N6AMT1ENSG00000156239.7286.95260461.65840-0.686005.668604.49780K562EIF4A3
N6AMT1ENSG00000156239.7279.57750468.57000-0.745005.758204.51460K562FMR1
N6AMT1ENSG00000156239.7314.11720439.68150-0.485202.876502.06650K562GPKOW
N6AMT1ENSG00000156239.7365.29870689.64510-0.916804.716202.98870K562HNRNPA2B1
N6AMT1ENSG00000156239.7339.48150444.75030-0.389702.085601.55760K562HNRNPC
N6AMT1ENSG00000156239.7592.19100747.97300-0.336902.304201.35020K562HNRNPL
N6AMT1ENSG00000156239.7442.35430613.32300-0.471404.156603.05360K562HNRNPU
N6AMT1ENSG00000156239.7314.63280515.31990-0.711804.911503.37550K562IGF2BP2
N6AMT1ENSG00000156239.7343.10210524.25210-0.611605.124003.40890K562IGF2BP3
N6AMT1ENSG00000156239.7684.940601011.58160-0.562605.571404.30900K562KIF1C
N6AMT1ENSG00000156239.7687.73750968.31120-0.493604.270202.85270K562MAK16
N6AMT1ENSG00000156239.7817.309701133.22320-0.471504.464303.25590K562MBNL1
N6AMT1ENSG00000156239.7250.56230429.17860-0.776406.568105.19170K562METAP2
N6AMT1ENSG00000156239.7847.768901219.99220-0.525105.697804.08200K562MSI2
N6AMT1ENSG00000156239.7479.11850794.30510-0.729305.276803.92100K562NAA15
N6AMT1ENSG00000156239.7258.07800461.03720-0.837105.788304.02470K562NCBP2
N6AMT1ENSG00000156239.7881.739701252.12290-0.506005.340803.21850K562NOL12
N6AMT1ENSG00000156239.7276.46190426.45650-0.625303.931402.32260K562NONO
N6AMT1ENSG00000156239.7289.54960603.17100-1.058805.737904.15950K562PABPN1
N6AMT1ENSG00000156239.7326.10840442.68110-0.440902.766501.96490K562POLR2G
N6AMT1ENSG00000156239.7275.24570421.03520-0.613203.778702.90270K562PRPF8
N6AMT1ENSG00000156239.7314.13350526.40620-0.744805.424904.52260K562PTBP1
N6AMT1ENSG00000156239.7797.896101248.81700-0.646307.959606.56790K562PUF60
N6AMT1ENSG00000156239.71069.446201328.58780-0.313003.174802.02960K562PUM1
N6AMT1ENSG00000156239.71074.559301301.47230-0.276402.845201.87170K562PUM2
N6AMT1ENSG00000156239.7464.71580945.34020-1.0245014.2052013.01750K562PUS1
N6AMT1ENSG00000156239.7390.47530921.04720-1.2380020.0484018.41190K562RBM15
N6AMT1ENSG00000156239.71119.31790753.495300.570806.241503.87660K562RBM17
N6AMT1ENSG00000156239.7331.66060504.89860-0.606304.366703.27960K562RBM22
N6AMT1ENSG00000156239.7306.39190428.83040-0.485002.339401.59120K562RPS19
N6AMT1ENSG00000156239.7270.63310551.57310-1.027204.255402.67340K562SF1
N6AMT1ENSG00000156239.7410.58980593.60630-0.531804.902903.84380K562SF3A3
N6AMT1ENSG00000156239.7297.58150418.15660-0.490802.411601.50900K562SF3B1
N6AMT1ENSG00000156239.7370.75470496.79670-0.422202.917202.03830K562SF3B4
N6AMT1ENSG00000156239.7271.03790420.48720-0.633604.297602.21600K562SRP68
N6AMT1ENSG00000156239.7359.50210487.27680-0.438702.649501.62570K562SRSF5
N6AMT1ENSG00000156239.7309.24510466.11370-0.591904.451302.77400K562SSB
N6AMT1ENSG00000156239.7979.84140723.574300.437303.364801.84580K562SSRP1
N6AMT1ENSG00000156239.7263.47780407.57910-0.629403.718202.52370K562SUPV3L1
N6AMT1ENSG00000156239.7308.46620522.31230-0.759806.574905.44260K562TARDBP
N6AMT1ENSG00000156239.7211.91080371.57940-0.810205.718303.34490K562TFIP11
N6AMT1ENSG00000156239.7515.25660717.92790-0.478504.925003.22020K562TROVE2
N6AMT1ENSG00000156239.7360.79300478.26900-0.406702.656701.86860K562U2AF2
N6AMT1ENSG00000156239.7195.62640431.40930-1.1410010.958608.88360K562UCHL5
N6AMT1ENSG00000156239.7489.66660637.83520-0.381403.104102.34450K562UPF1
N6AMT1ENSG00000156239.7490.51490958.42220-0.966406.041103.95080K562UTP18
N6AMT1ENSG00000156239.7232.75180439.35370-0.916607.954905.59780K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for N6AMT1 is not available on ENCORE database.





12 RBPs can affect the splicing of N6AMT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEN6AMT1ENSG00000156239.7chr21-3025219130252275302505133025065530254481302545720.351000.000090.01181includedHepG2TBRG4
SEN6AMT1ENSG00000156239.7chr21-3025219130252275302505133025065530254481302545720.369000.000060.07802includedK562PHF6
SEN6AMT1ENSG00000156239.7chr21-3025219130252275302505133025065530254481302545720.348000.000630.05105includedK562SUPV3L1
A3SSN6AMT1ENSG00000156239.7chr21-3025448130254595302544813025457230255306302553930.056000.015480.07679longerK562AQR
RIN6AMT1ENSG00000156239.7chr21-3024451230248813302445123024506130248633302488130.525000.002350.08228includedHepG2SFPQ
RIN6AMT1ENSG00000156239.7chr21-302445123024881330244512302450613024863330248813-0.637000.004160.07942excludedHepG2UCHL5
RIN6AMT1ENSG00000156239.7chr21-302445123024881330244512302450613024863330248813-0.337000.000560.02582excludedK562HNRNPUL1
RIN6AMT1ENSG00000156239.7chr21-3024451230248813302445123024506130248633302488130.401000.000380.03729includedK562PHF6
RIN6AMT1ENSG00000156239.7chr21-302445123024881330244512302450613024863330248813-0.311000.001260.08200excludedK562XRN2
RIN6AMT1ENSG00000156239.7chr21-3024451230248813302445123024506130248633302488130.645000.003320.03252includedHepG2U2AF1
RIN6AMT1ENSG00000156239.7chr21-302445123024881330244512302450613024863330248813-0.567000.006200.05823excludedHepG2HNRNPK
RIN6AMT1ENSG00000156239.7chr21-302445123024881330244512302450613024863330248813-0.329000.003150.08449excludedK562TARDBP
RIN6AMT1ENSG00000156239.7chr21-302445123024881330244512302450613024863330248813-0.446000.000070.00251excludedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for N6AMT1 is not avaliable on ENCORE database.