N6AMT1

General Information

Gene Name : N6AMT1
Gene ID : ENSG00000156239.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: N6AMT1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	N6AMT1	ENSG00000156239.11	3.51	3.15	3.33	ENCSR000AEF
HepG2	N6AMT1	ENSG00000156239.11	6.35	6.10	6.22	ENCSR985KAT
K562	N6AMT1	ENSG00000156239.11	8.94	7.99	8.46	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for N6AMT1 is not avaliable on ENCORE database.

Proteins bound to RNA

N6AMT1 RNA is bound by 1 proteins.

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eCLIP assay for N6AMT1 is not avaliable on ENCORE database.

1 proteins are bound to N6AMT1 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	30248661	30248769	-	3'-UTR,CDS,intron-Distal	3.79639	5.56491	HepG2	BCLAF1
chr21	30254505	30254560	-	CDS,intron-Distal	4.19886	3.38968	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 2 of 2 entries

eCLIP assay for N6AMT1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for N6AMT1 is not available on ENCORE database.
73 RBPs can affect the levels of N6AMT1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for N6AMT1 is not available on ENCORE database.

73 RBPs can affect the gene expression of N6AMT1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
N6AMT1	ENSG00000156239.7	390.47530	921.04720	-1.23800	20.04840	18.41190	K562	RBM15
N6AMT1	ENSG00000156239.7	464.71580	945.34020	-1.02450	14.20520	13.01750	K562	PUS1
N6AMT1	ENSG00000156239.7	534.00590	916.03990	-0.77860	12.89430	11.76670	K562	AGGF1
N6AMT1	ENSG00000156239.7	470.25000	895.26030	-0.92890	11.09830	10.03830	K562	AQR
N6AMT1	ENSG00000156239.7	195.62640	431.40930	-1.14100	10.95860	8.88360	K562	UCHL5
N6AMT1	ENSG00000156239.7	570.49060	953.17350	-0.74050	8.88100	7.63730	K562	AKAP8L
N6AMT1	ENSG00000156239.7	797.89610	1248.81700	-0.64630	7.95960	6.56790	K562	PUF60
N6AMT1	ENSG00000156239.7	95.26850	196.02660	-1.04100	7.30920	6.46890	HepG2	TRIM56
N6AMT1	ENSG00000156239.7	333.48380	177.56010	0.90920	7.26070	6.21160	HepG2	RBM25
N6AMT1	ENSG00000156239.7	232.75180	439.35370	-0.91660	7.95490	5.59780	K562	XRN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for N6AMT1 is not available on ENCORE database.

12 RBPs can affect the splicing of N6AMT1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	N6AMT1	ENSG00000156239.7	chr21	-	30252191	30252275	30250513	30250655	30254481	30254572	0.36900	0.00006	0.07802	included	K562	PHF6
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	-0.44600	0.00007	0.00251	excluded	K562	PTBP1
SE	N6AMT1	ENSG00000156239.7	chr21	-	30252191	30252275	30250513	30250655	30254481	30254572	0.35100	0.00009	0.01181	included	HepG2	TBRG4
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	0.40100	0.00038	0.03729	included	K562	PHF6
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	-0.33700	0.00056	0.02582	excluded	K562	HNRNPUL1
SE	N6AMT1	ENSG00000156239.7	chr21	-	30252191	30252275	30250513	30250655	30254481	30254572	0.34800	0.00063	0.05105	included	K562	SUPV3L1
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	-0.31100	0.00126	0.08200	excluded	K562	XRN2
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	0.52500	0.00235	0.08228	included	HepG2	SFPQ
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	-0.32900	0.00315	0.08449	excluded	K562	TARDBP
RI	N6AMT1	ENSG00000156239.7	chr21	-	30244512	30248813	30244512	30245061	30248633	30248813	0.64500	0.00332	0.03252	included	HepG2	U2AF1

Showing 1 to 10 of 13 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

N6AMT1

General Information

Functions

Localization

Domains (AlphaFold: N6AMT1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for N6AMT1 is not avaliable on ENCORE database.

1 proteins are bound to N6AMT1 RNA:

eCLIP assay for N6AMT1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for N6AMT1 is not available on ENCORE database.

73 RBPs can affect the gene expression of N6AMT1 :

The Knockdown/knockout RNA-Seq assay for N6AMT1 is not available on ENCORE database.

12 RBPs can affect the splicing of N6AMT1 :

The Knockdown/knockout RNA-Seq assay for N6AMT1 is not avaliable on ENCORE database.