HTT

General Information

Gene Name       : HTT
Gene ID             : ENSG00000197386.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HTT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HTTENSG00000197386.12127.8977.20102.55ENCSR000AEF
HepG2HTTENSG00000197386.1231.9324.4628.20ENCSR985KAT
K562HTTENSG00000197386.1216.0415.6915.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HTT is not avaliable on ENCORE database.



Proteins bound to RNA
  • HTT RNA is bound by 36 proteins.  







eCLIP assay for HTT is not avaliable on ENCORE database.





36 proteins are bound to HTT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr432424113242468+3'-UTR4.807006.81418HepG2UPF1
chr431748013174863+3'-UTR,CDS,intron-Proximal3.245646.82013HepG2PPIG
chr432419663242038+3'-UTR4.876147.45692HepG2UPF1
chr432421173242289+3'-UTR5.7897215.42180HepG2UPF1
chr432419763242033+3'-UTR3.643795.66290HepG2EIF3H
chr430764413076526+5'-UTR5.062378.15057K562FXR2
chr430764723076575+5'-UTR,CDS3.812799.23400HepG2DDX3X
chr432273903227462+CDS3.166435.54641HepG2PPIG
chr431090453109111+CDS3.726079.02617HepG2PPIG
chr431272293127329+CDS,intron-Proximal3.668935.83621K562AQR
chr432305813230621+CDS,intron-Proximal4.215043.02757HepG2AQR
chr431345983134639+CDS,intron-Proximal3.6653011.73537HepG2BCLAF1
chr431330653133126+CDS,intron-Proximal3.8006211.19453HepG2BCLAF1
chr431342873134399+CDS,intron-Proximal3.063894.88483K562ZNF622
chr431445903144647+CDS,intron-Proximal5.649415.35117HepG2PRPF8
chr431361263136159+CDS,intron-Proximal3.644475.30095HepG2PPIG
chr432057923205855+CDS4.877025.85077HepG2FXR2
chr432273873227411+CDS,intron-Proximal3.221034.24070HepG2GRWD1
chr431497373149844+CDS3.600896.00907HepG2PPIG
chr431346113134638+CDS3.082723.60157HepG2GRWD1
chr431071413107195+CDS,intron-Proximal4.761775.35117HepG2PRPF8
chr431272413127345+CDS,intron-Proximal3.729053.96535HepG2AQR
chr431764493176498+CDS3.562485.86107HepG2PPIG
chr432085623208677+CDS5.165598.22878K562FXR2
chr432195033219575+CDS4.453404.60263HepG2LIN28B
chr431179433118032+CDS,intron-Proximal5.4185614.11848HepG2PRPF8
chr431345593134638+CDS4.090005.02275HepG2UCHL5
chr432105273210607+CDS,intron-Proximal3.351553.63043HepG2GRWD1
chr432273863227441+CDS,intron-Proximal3.104865.08826HepG2FXR2
chr431740463174113+CDS,intron-Proximal3.331783.73423K562UCHL5
chr431333633133402+CDS,intron-Proximal3.112976.89364HepG2PPIG
chr431070833107162+CDS,intron-Proximal3.098006.96928HepG2BCLAF1
chr431231053123170+CDS,intron-Proximal3.544363.98203HepG2PRPF8
chr431907323190818+CDS4.620627.18289K562YBX3
chr431330603133094+CDS3.884415.80295HepG2PPIG
chr431445113144545+CDS3.169114.26492HepG2BCLAF1
chr431290073129130+CDS3.445355.59833HepG2GRWD1
chr431245803124670+CDS,intron-Proximal3.512223.39008HepG2AQR
chr431333623133395+CDS,intron-Proximal3.537898.47761HepG2BCLAF1
chr431090253109075+CDS4.261626.65960HepG2BCLAF1
chr431485123148574+CDS,intron-Proximal3.064295.23954HepG2BUD13
chr431379813138051+CDS3.3340417.16575HepG2BCLAF1
chr431620783162116+CDS3.388383.09866HepG2FXR2
chr431485233148576+CDS,intron-Proximal3.566987.44928HepG2PPIG
chr431790613179115+CDS,intron-Proximal4.130778.08603HepG2BCLAF1
chr431896003189664+CDS,intron-Proximal6.352536.69228HepG2PRPF8
chr432241113224205+CDS,intron-Proximal4.968106.56513K562FXR2
chr431246523124753+CDS,intron-Proximal4.319795.97994K562AQR
chr431560893156146+CDS3.338624.10184HepG2FXR2
chr431895943189710+CDS,intron-Proximal4.9826312.68376K562PRPF8
chr431246153124659+CDS,intron-Proximal3.091703.24162HepG2G3BP1
chr431883803188420+CDS3.580345.97823HepG2BCLAF1
chr432143083214347+CDS4.804755.26450HepG2EIF3H
chr431246183124658+CDS3.909236.36347HepG2PPIG
chr431485233148588+CDS,intron-Proximal4.780308.86394HepG2EIF3H
chr432241153224208+CDS3.225075.59833HepG2GRWD1
chr431485233148574+CDS,intron-Proximal3.318763.60157HepG2GRWD1
chr431469173146954+CDS4.091524.66686K562DDX24
chr431334683133503+CDS,intron-Proximal3.644656.39464HepG2BCLAF1
chr431376343137680+CDS3.995616.64430HepG2PPIG
chr431331113133124+CDS3.031784.87174HepG2PPIG
chr431346163134639+CDS,intron-Proximal4.486246.36164K562DDX24
chr432138093213857+CDS3.491475.86107HepG2PPIG
chr431317373131784+CDS,intron-Proximal3.108635.27152HepG2BCLAF1
chr431070843107164+CDS,intron-Proximal3.4835514.96102HepG2PPIG
chr432401993240299+CDS3.528206.05315HepG2FXR2
chr432274653227514+CDS,intron-Proximal4.218905.34978HepG2PRPF8
chr432057163205790+CDS,intron-Proximal3.378183.99381K562BUD13
chr431342933134432+CDS3.140157.33264HepG2GRWD1
chr430886723088744+CDS4.452038.47938HepG2BCLAF1
chr431342883134395+CDS,intron-Proximal3.063613.07714K562YBX3
chr431345523134598+CDS3.124316.06438HepG2BCLAF1
chr431361273136162+CDS,intron-Proximal4.481965.79396K562DDX24
chr431343233134409+CDS3.037895.69345HepG2BCLAF1
chr431485213148568+CDS,intron-Proximal3.251748.30744HepG2BCLAF1
chr431317263131822+CDS,intron-Proximal5.4610910.73027HepG2GRWD1
chr431320303132090+CDS,intron-Proximal3.554107.83567HepG2BCLAF1
chr431345813134641+CDS,intron-Proximal3.820339.05563HepG2PPIG
chr431764633176509+CDS3.720395.56491HepG2BCLAF1
chr431823003182363+CDS4.178077.09561HepG2BCLAF1
chr432143983214445+CDS,intron-Proximal3.274994.69671HepG2PPIG
chr432274113227458+CDS4.583536.26332HepG2GRWD1
chr431906853190781+CDS3.305925.53494HepG2BCLAF1
chr432136763213728+CDS3.067473.21510HepG2PPIG
chr431422863142298+CDS4.130113.38968HepG2BCLAF1
chr431468953146956+CDS,intron-Proximal3.835938.12996HepG2PPIG
chr431740463174122+CDS,intron-Proximal3.391806.50801HepG2BCLAF1
chr432315693231619+CDS,intron-Proximal6.6531124.07064K562AGGF1
chr431011113101178+CDS,intron-Proximal4.245663.49003K562PRPF8
chr431746703174748+CDS3.592577.89918K562DDX24
chr431379713138041+CDS3.266924.62864K562ZNF622
chr431379743138046+CDS4.646739.80601K562DDX24
chr431362193136284+CDS,intron-Proximal4.730264.02817HepG2PRPF8
chr431740693174121+CDS3.035694.05271HepG2PPIG
chr431362423136266+CDS4.289113.20027K562ZNF622
chr431342883134316+CDS,intron-Proximal3.383477.01246HepG2BCLAF1
chr431469273146954+CDS3.149363.60157HepG2GRWD1
chr431766813176790+CDS3.703225.55970K562YBX3
chr431320213132089+CDS,intron-Proximal3.859096.98930HepG2U2AF2
chr432086823208744+CDS,intron-Proximal5.177899.43475HepG2PRPF8
chr432137103213776+CDS4.807695.26571K562FMR1
chr431361273136149+CDS,intron-Proximal4.009304.21087HepG2GRWD1
chr431330123133052+CDS,intron-Proximal4.439378.98365HepG2PPIG
chr431800243180041+CDS,intron-Proximal4.819364.78529HepG2BCLAF1
chr431316593131721+CDS4.135434.15726HepG2G3BP1
chr431090103109045+CDS,intron-Proximal3.137766.47139HepG2PPIG
chr431321113132149+CDS3.614037.26626HepG2PPIG
chr431245953124693+CDS,intron-Proximal4.971716.64445K562BUD13
chr431272773127355+CDS3.6894810.46300HepG2PPIG
chr431485193148572+CDS,intron-Proximal4.037055.20093K562DDX24
chr431321063132149+CDS4.291044.45558HepG2GRWD1
chr431740463174108+CDS,intron-Proximal3.267544.76953K562DDX24
chr431379543138038+CDS4.749608.43861HepG2EIF3H
chr432257893225856+CDS3.376633.22540HepG2G3BP1
chr431620613162120+CDS,intron-Proximal3.834234.66686K562DDX24
chr431497293149866+CDS,intron-Proximal3.312384.50077HepG2FXR2
chr431343763134434+CDS4.966167.60796HepG2PPIG
chr431361263136156+CDS,intron-Proximal3.8991710.36594HepG2BCLAF1
chr431468993146956+CDS,intron-Proximal5.512276.29060HepG2EIF3H
chr431230903123130+CDS3.991313.60441HepG2GRWD1
chr432168383216890+CDS3.285014.41784HepG2GRWD1
chr432306703230726+CDS3.001034.63108HepG2PPIG
chr431070873107154+CDS3.115235.74981HepG2GRWD1
chr431330943133111+CDS3.272503.80065HepG2PPIG
chr431620873162119+CDS3.345603.94979HepG2BCLAF1
chr432196223219672+CDS4.141263.82000HepG2GRWD1
chr432258373225896+CDS,intron-Proximal4.5725110.42975HepG2PRPF8
chr431317493131767+CDS3.349943.05460HepG2PPIG
chr431362533136265+CDS4.570615.03746HepG2BCLAF1
chr432144163214512+CDS,intron-Proximal5.0993114.79448HepG2PRPF8
chr431345633134605+CDS3.962514.69115HepG2EIF3H
chr432303503230411+CDS4.015935.52342HepG2PPIG
chr432314273231501+intron-Distal4.960716.14086K562GTF2F1
chr432309783231043+intron-Distal3.981525.38424HepG2HNRNPL
chr431976333197685+intron-Distal3.180033.23296HepG2SUGP2
chr431812113181302+intron-Distal4.005213.34609K562TARDBP
chr431318123131945+intron-Distal,intron-Proximal4.577095.41654K562KHSRP
chr432312313231285+intron-Distal7.0315062.74120K562AGGF1
chr431019313101968+intron-Distal4.021133.60944K562TARDBP
chr432308153230866+intron-Distal,intron-Proximal6.6999552.05301K562AGGF1
chr431246903124825+intron-Distal,intron-Proximal3.262784.39362HepG2KHSRP
chr432313903231508+intron-Distal5.6541138.37388HepG2XPO5
chr432312983231332+intron-Distal3.594973.17661HepG2HNRNPL
chr432310983231125+intron-Distal6.0434841.83116K562AGGF1
chr432311723231245+intron-Distal5.8367031.55147HepG2AGGF1
chr432313253231381+intron-Distal4.087785.76824HepG2CDC40
chr432312943231482+intron-Distal5.7554110.74292HepG2GTF2F1
chr432312763231390+intron-Distal5.2142622.31404HepG2XPO5
chr432314103231537+intron-Distal,intron-Proximal5.7669312.54832K562AKAP8L
chr432313933231516+intron-Distal,intron-Proximal5.6977713.73667K562HNRNPL
chr431014003101444+intron-Distal3.838003.34609K562TARDBP
chr432311293231239+intron-Distal5.7440914.94144HepG2HNRNPL
chr431802083180338+intron-Distal,intron-Proximal4.334664.53454K562PRPF8
chr432238143223893+intron-Distal3.704313.60408HepG2XPO5
chr431127573112807+intron-Distal4.422024.03915HepG2SUGP2
chr431016603101757+intron-Distal5.115986.84138K562EIF4G2
chr432313133231356+intron-Distal5.0717123.89003HepG2AGGF1
chr432310493231121+intron-Distal6.8002538.12342HepG2AGGF1
chr431032123103288+intron-Distal3.579685.06094K562HNRNPM
chr432311793231228+intron-Distal7.1932572.32122K562AGGF1
chr432311553231179+intron-Distal6.6017647.38147K562AGGF1
chr432310673231129+intron-Distal4.626227.41200HepG2HNRNPL
chr430853413085425+intron-Distal4.035786.25849HepG2HNRNPL
chr431247423124806+intron-Distal,intron-Proximal4.5482110.69368K562KHSRP
chr430809893081008+intron-Distal3.314014.61874HepG2HNRNPC
chr431173363117510+intron-Distal4.079683.04182K562HNRNPM
chr432313563231388+intron-Distal5.8200619.95287HepG2AGGF1
chr431019383102013+intron-Distal4.304824.48623K562EXOSC5
chr430853283085418+intron-Distal4.5435310.03443K562HNRNPL
chr432311603231294+intron-Distal5.093196.40009HepG2GTF2F1
chr432308103230915+intron-Distal,intron-Proximal6.3092027.65119HepG2AGGF1
chr430905283090647+intron-Distal4.345164.76003K562KHSRP
chr431881073188233+intron-Distal,intron-Proximal3.775063.24603K562KHSRP
chr432313923231409+intron-Distal5.6663211.11793HepG2HNRNPL
chr432312363231309+intron-Distal4.115114.40109K562AKAP8L
chr432311253231155+intron-Distal6.7906153.92341K562AGGF1
chr432313323231357+intron-Distal4.061964.63615HepG2HNRNPL
chr431791513179255+intron-Distal,intron-Proximal4.207304.79477K562KHSRP
chr432313883231486+intron-Distal7.03943118.19316K562AGGF1
chr430853073085385+intron-Distal3.376486.13559K562AGGF1
chr432315023231569+intron-Distal,intron-Proximal7.3320236.24793K562AGGF1
chr431398453139930+intron-Distal6.2288312.91829HepG2PCBP2
chr430845253084599+intron-Distal3.330573.39857HepG2HNRNPM
chr432310453231159+intron-Distal5.057179.84244K562HNRNPL
chr431813973181481+intron-Distal4.283404.85626K562TARDBP
chr432313573231392+intron-Distal4.261507.15670HepG2HNRNPL
chr432310213231097+intron-Distal5.020316.27791HepG2CDC40
chr432310203231190+intron-Distal6.1122128.72700HepG2XPO5
chr431989203199022+intron-Distal4.457214.28663HepG2SUGP2
chr431031613103248+intron-Distal4.277117.32988HepG2HNRNPM
chr432309153231049+intron-Distal6.2123037.68351HepG2AGGF1
chr431813353181397+intron-Distal3.852613.22972K562TARDBP
chr431019683102017+intron-Distal3.531784.82429K562TARDBP
chr432310183231050+intron-Distal6.4805741.78545K562AGGF1
chr432311593231256+intron-Distal4.851048.62021K562HNRNPL
chr432312453231309+intron-Distal6.1965027.91041HepG2AGGF1
chr432313233231387+intron-Distal8.4947787.15764K562AGGF1
chr431031543103212+intron-Distal4.437794.51309K562HNRNPM
chr431981883198262+intron-Distal5.163085.81375HepG2XPO5
chr431327533132890+intron-Distal4.226964.43116HepG2RBFOX2
chr432311213231172+intron-Distal7.3905534.43453HepG2AGGF1
chr432310543231160+intron-Distal5.190457.26171HepG2GTF2F1
chr432206443220735+intron-Distal3.967673.60944K562TARDBP
chr432314103231479+intron-Distal5.600559.11951HepG2CDC40
chr432314093231489+intron-Distal5.0954327.27471HepG2HNRNPL
chr432313883231493+intron-Distal5.0908435.66142HepG2AGGF1
chr432313093231402+intron-Distal5.8404411.25217K562AKAP8L
chr432258733225947+intron-Proximal5.596228.14804HepG2EFTUD2
chr432403403240400+intron-Proximal3.135423.65608HepG2RBFOX2
chr432273183227382+intron-Proximal4.908235.40008K562SF3B4
chr431246893124742+intron-Proximal4.767565.85485K562KHSRP
chr432307483230795+intron-Proximal5.3734323.69970K562AGGF1
chr432144503214508+intron-Proximal4.685973.90539HepG2RBM22
chr432273183227373+intron-Proximal4.186183.95187HepG2AQR
chr431179993118045+intron-Proximal3.366854.07440K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HTT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HTT is not available on ENCORE database.

  • 67 RBPs can affect the levels of HTT.  








The Knockdown/knockout RNA-Seq assay for HTT is not available on ENCORE database.





67 RBPs can affect the gene expression of HTT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HTTENSG00000197386.64180.856203235.075900.369902.870701.91140HepG2ABCF1
HTTENSG00000197386.63470.249503009.805700.205302.941202.31690HepG2ACO1
HTTENSG00000197386.62477.540603504.47410-0.500304.362203.71490HepG2AKAP1
HTTENSG00000197386.63838.748803023.904600.344106.337705.22160HepG2AKAP8L
HTTENSG00000197386.63544.035502356.165800.588903.238502.40540HepG2CNOT7
HTTENSG00000197386.63495.365603026.030900.207903.270202.47520HepG2DAZAP1
HTTENSG00000197386.63376.862002750.945800.295702.322801.39730HepG2DDX5
HTTENSG00000197386.62996.995602228.122300.427607.527506.41400HepG2DNAJC21
HTTENSG00000197386.61948.470502208.51480-0.180702.270401.66690HepG2DNAJC2
HTTENSG00000197386.63788.588002771.868200.450704.200703.47830HepG2EIF2S1
HTTENSG00000197386.64035.736903062.798600.397902.912102.25640HepG2EIF4A3
HTTENSG00000197386.64152.981002982.907100.477303.283602.53690HepG2EIF4B
HTTENSG00000197386.67099.145304873.092200.5427017.2430015.95230HepG2ETF1
HTTENSG00000197386.65122.143603266.516600.648907.284906.09810HepG2FIP1L1
HTTENSG00000197386.62398.704901899.338000.336703.152802.31750HepG2FUBP3
HTTENSG00000197386.64936.646502867.183100.7838010.783909.51420HepG2G3BP1
HTTENSG00000197386.62140.252001679.493400.349702.700001.81400HepG2GEMIN5
HTTENSG00000197386.63755.338802564.263400.550305.707604.81070HepG2GPKOW
HTTENSG00000197386.62730.389202249.469100.279402.444201.83430HepG2HNRNPA1
HTTENSG00000197386.62278.962502904.92360-0.350102.383901.73320HepG2HNRNPK
HTTENSG00000197386.64040.829802914.178900.471504.786203.92000HepG2IGF2BP2
HTTENSG00000197386.63954.759103109.748800.346702.409101.81790HepG2MATR3
HTTENSG00000197386.64241.549303182.824100.414203.495202.78810HepG2NCBP2
HTTENSG00000197386.63345.363302107.578600.666502.398601.38610HepG2NONO
HTTENSG00000197386.62645.649902169.822100.285902.324401.63630HepG2NSUN2
HTTENSG00000197386.63335.664602718.449300.295104.655503.67970HepG2PRPF4
HTTENSG00000197386.62603.404701769.416000.557005.339204.25270HepG2PRPF8
HTTENSG00000197386.63775.719102917.221700.372106.759705.97880HepG2PTBP1
HTTENSG00000197386.63906.752002864.356200.447702.757602.16180HepG2PUF60
HTTENSG00000197386.63552.551603040.655500.224401.829501.32560HepG2PUM1
HTTENSG00000197386.63737.395503038.425200.298603.534802.78130HepG2PUM2
HTTENSG00000197386.64002.904803065.674900.384709.194108.17990HepG2PUS1
HTTENSG00000197386.64650.260703159.378600.5576012.0022010.83570HepG2QKI
HTTENSG00000197386.63009.953403568.80710-0.245702.466401.65280HepG2RBM15
HTTENSG00000197386.63539.378004073.02600-0.202602.045501.58200HepG2RBM22
HTTENSG00000197386.63521.609602867.356000.296403.003702.30500HepG2RBM25
HTTENSG00000197386.63756.435403246.570300.210302.666302.13280HepG2NELFE
HTTENSG00000197386.62607.336801835.629100.506206.916205.99400HepG2RPS19
HTTENSG00000197386.63184.205702509.027100.343702.784901.98230HepG2RPS2
HTTENSG00000197386.63568.487203037.166900.232503.185002.55590HepG2SF3B4
HTTENSG00000197386.63305.602702746.501800.267205.096704.19010HepG2SLBP
HTTENSG00000197386.62874.085702581.316600.154902.081201.51150HepG2SMN1
HTTENSG00000197386.61825.711502695.09670-0.561903.617802.72020HepG2SNRNP70
HTTENSG00000197386.66339.476403170.160000.9997059.2935057.74520HepG2SRSF1
HTTENSG00000197386.63794.152902828.152400.423809.568808.49840HepG2SRSF5
HTTENSG00000197386.61746.498302410.24220-0.464702.790401.58240HepG2SUB1
HTTENSG00000197386.64791.134203216.373100.5748016.9303015.59890HepG2SUCLG1
HTTENSG00000197386.62929.257102283.992700.358902.125401.52230HepG2SUPV3L1
HTTENSG00000197386.62947.979002415.137300.287503.168502.63910HepG2TIAL1
HTTENSG00000197386.63345.955102798.379100.257702.438501.62170HepG2TUFM
HTTENSG00000197386.65365.152303486.472100.6218023.5788021.93370HepG2UPF1
HTTENSG00000197386.64091.786403583.609100.191202.277101.31270HepG2UTP18
HTTENSG00000197386.62979.209402682.691800.151101.881701.31320HepG2ZC3H8
HTTENSG00000197386.62916.814602602.504200.164401.788401.31160K562AGGF1
HTTENSG00000197386.61789.581202276.03130-0.346902.844702.24920K562AQR
HTTENSG00000197386.62462.814803110.13060-0.336703.923102.48620K562CCDC124
HTTENSG00000197386.61292.125801068.104700.274602.567201.80000K562EIF3G
HTTENSG00000197386.6870.316201141.58260-0.391402.164401.55030K562G3BP2
HTTENSG00000197386.61705.315502367.08160-0.473105.294004.24370K562GRSF1
HTTENSG00000197386.61175.131201510.54230-0.362202.626801.42690K562HNRNPK
HTTENSG00000197386.6856.828201303.41240-0.605205.450104.08580K562HNRNPM
HTTENSG00000197386.61597.787402148.33980-0.427104.055003.09810K562HSPD1
HTTENSG00000197386.61971.742401513.375900.381602.522401.55730K562IGF2BP2
HTTENSG00000197386.62111.138301826.360800.208902.325401.58230K562MTPAP
HTTENSG00000197386.62106.130801616.288900.381804.502603.47750K562POLR2G
HTTENSG00000197386.61280.392301798.91480-0.490505.011403.85300K562PPIG
HTTENSG00000197386.62090.042401195.758500.805503.462102.07780K562SF1
HTTENSG00000197386.62535.851202151.647900.236902.992502.24510K562UPF1
HTTENSG00000197386.62471.459101841.095800.424705.205003.98530K562WDR3
HTTENSG00000197386.62255.828001914.534900.236603.257402.34640K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HTT is not available on ENCORE database.





11 RBPs can affect the splicing of HTT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHTTENSG00000197386.6chr4+311400831141763109011310915031170303117172-0.122000.006580.06594excludedHepG2U2AF2
SEHTTENSG00000197386.6chr4+3204703320479332014583201666320573332058750.174000.000130.04372includedHepG2BCLAF1
SEHTTENSG00000197386.6chr4+3204708320479332014583201666320573332058750.106000.000110.05080includedK562BUD13
SEHTTENSG00000197386.6chr4+3204708320479332014583201666320573332058750.118000.000260.02276includedHepG2FTO
SEHTTENSG00000197386.6chr4+320470332047933201458320166632057333205875-0.069000.004810.08594excludedHepG2SRSF1
SEHTTENSG00000197386.6chr4+320145832016663189377319082032057333205875-0.096000.000940.02916excludedHepG2SF3A3
A3SSHTTENSG00000197386.6chr4+3216804321693832168363216938321568432158620.066000.013540.06853longerK562AQR
A5SSHTTENSG00000197386.6chr4+3215684321588332156843215862321683632169380.085000.000220.02229longerHepG2SF3A3
A5SSHTTENSG00000197386.6chr4+3211553321169632115533211676321365532138690.133000.000620.07024longerHepG2FTO
RIHTTENSG00000197386.6chr4+3189377319082031893773189613319067731908200.061000.010430.09214includedK562AGGF1
RIHTTENSG00000197386.6chr4+3189377319082031893773189613319067731908200.079000.003030.02869includedK562AKAP8L
RIHTTENSG00000197386.6chr4+3189377319082031893773189613319067731908200.084000.000460.00635includedHepG2TAF15
RIHTTENSG00000197386.6chr4+318937731908203189377318961331906773190820-0.086000.001900.03085excludedK562FXR1
MXEHTTENSG00000197386.6chr4+320145832016663205733320587531893773190820320822232084020.178000.011140.069071includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HTT is not avaliable on ENCORE database.