GRAMD1B

General Information

Gene Name       : GRAMD1B
Gene ID             : ENSG00000023171.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GRAMD1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GRAMD1BENSG00000023171.1716.2219.2217.72ENCSR000AEF
HepG2GRAMD1BENSG00000023171.170.380.490.43ENCSR985KAT
K562GRAMD1BENSG00000023171.170.010.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GRAMD1B is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on GRAMD1B RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for GRAMD1B is not avaliable on ENCORE database.






NO known proteins are bound to GRAMD1B RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for GRAMD1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GRAMD1B is not available on ENCORE database.

  • 23 RBPs can affect the levels of GRAMD1B.  








The Knockdown/knockout RNA-Seq assay for GRAMD1B is not available on ENCORE database.





23 RBPs can affect the gene expression of GRAMD1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GRAMD1BENSG00000023171.1041.704301.640904.6676010.170608.81120HepG2AKAP8L
GRAMD1BENSG00000023171.1048.303901.481805.0266011.093609.60310HepG2ASCC1
GRAMD1BENSG00000023171.1013.267201.632503.022602.390201.76400HepG2CKAP4
GRAMD1BENSG00000023171.1028.361606.407502.146003.527602.82040HepG2CELF1
GRAMD1BENSG00000023171.1031.508705.138102.616303.184002.09150HepG2FTO
GRAMD1BENSG00000023171.1020.106501.465203.778404.100903.30010HepG2G3BP1
GRAMD1BENSG00000023171.1034.941902.180604.002103.777002.71480HepG2GEMIN5
GRAMD1BENSG00000023171.1026.657704.584502.539603.722402.53650HepG2GNB2L1
GRAMD1BENSG00000023171.1024.677903.514202.811903.529801.94060HepG2HLTF
GRAMD1BENSG00000023171.1018.384403.798802.274702.160201.58330HepG2HNRNPA1
GRAMD1BENSG00000023171.1043.113101.589904.761004.492703.70620HepG2MATR3
GRAMD1BENSG00000023171.1059.421703.450504.1060012.8949010.90540HepG2PCBP2
GRAMD1BENSG00000023171.1058.316006.496503.166108.114606.81400HepG2PRPF8
GRAMD1BENSG00000023171.1027.155406.520002.058203.010802.39360HepG2PUF60
GRAMD1BENSG00000023171.1056.505706.916503.030209.070607.89140HepG2PUM2
GRAMD1BENSG00000023171.10229.760503.325206.1104021.5473019.76120HepG2RAVER1
GRAMD1BENSG00000023171.1021.218605.086102.060602.464201.45140HepG2RPS5
GRAMD1BENSG00000023171.1017.733402.391402.890502.598701.68860HepG2SERBP1
GRAMD1BENSG00000023171.1084.425806.438503.7128017.8710016.47420HepG2SRSF5
GRAMD1BENSG00000023171.1050.737008.381102.597705.041404.17160HepG2SUPV3L1
GRAMD1BENSG00000023171.1015.742604.116101.935201.856001.37630HepG2TRIM56
GRAMD1BENSG00000023171.1013.579101.023703.729403.014102.45070HepG2ZNF622
GRAMD1BENSG00000023171.1021.488800.489105.457104.707303.73180K562PRPF8
GRAMD1BENSG00000023171.1014.585500.545704.740203.126602.09020K562SF3B1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GRAMD1B is not available on ENCORE database.






No RBPs affect the alternative splcing events of GRAMD1B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GRAMD1B is not avaliable on ENCORE database.