FAM213A

General Information

Gene Name       : FAM213A
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM213A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM213A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM213A RNA is bound by 17 proteins.  







eCLIP assay for FAM213A is not avaliable on ENCORE database.





17 proteins are bound to FAM213A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr108219223982192305+3'-UTR3.405038.64325HepG2UPF1
chr108218022282180260+3'-UTR,5'-UTR,CDS,intron-Proximal4.0118012.55615HepG2DDX3X
chr108219205482192194+3'-UTR7.3607942.70607HepG2UPF1
chr108216831182168408+5'-UTR,intron-Distal,intron-Proximal5.0089541.25653HepG2DDX3X
chr108216839282168437+5'-UTR,intron-Distal,intron-Proximal3.332273.51594HepG2AQR
chr108216833282168466+5'-UTR,intron-Distal,intron-Proximal3.373128.46171HepG2NCBP2
chr108218025282180397+5'-UTR,CDS3.2175410.04739HepG2RPS3
chr108216837282168439+5'-UTR,intron-Distal,intron-Proximal4.1329823.80022HepG2PRPF8
chr108218033882180375+CDS4.017485.01580HepG2DDX3X
chr108218026082180316+CDS5.0280139.17975HepG2DDX3X
chr108218573182185760+CDS3.303564.24070HepG2GRWD1
chr108218709482187255+CDS,intron-Proximal4.2833512.35307HepG2SND1
chr108218221182182265+CDS,intron-Proximal3.391806.50801HepG2BCLAF1
chr108218221082182250+CDS4.003493.43895HepG2LARP4
chr108218564582185731+CDS4.3556910.93296HepG2GRWD1
chr108218711982187242+CDS4.8307323.75695HepG2LIN28B
chr108218222182182263+CDS5.149105.84094HepG2SND1
chr108218564882185702+CDS4.609933.48040HepG2SND1
chr108216848682168547+intron-Distal,intron-Proximal3.129427.59371HepG2EFTUD2
chr108218947882189601+intron-Distal4.499509.75466HepG2DDX59
chr108216927682169326+intron-Distal3.890594.36528HepG2U2AF2
chr108218927882189481+intron-Distal4.248568.93927HepG2HNRNPK
chr108217817982178317+intron-Distal4.224603.06084HepG2HNRNPK
chr108218055582180664+intron-Distal4.230684.53660HepG2KHSRP
chr108218938482189478+intron-Distal6.5761620.91613HepG2DDX59
chr108218211582182167+intron-Proximal4.134254.24670HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM213A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM213A is not available on ENCORE database.

  • 108 RBPs can affect the levels of FAM213A.  








The Knockdown/knockout RNA-Seq assay for FAM213A is not available on ENCORE database.





108 RBPs can affect the gene expression of FAM213A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM213AENSG00000122378.91681.492802372.70960-0.496804.395003.22850HepG2ABCF1
FAM213AENSG00000122378.91158.336101913.07120-0.7238020.8947019.57220HepG2ACO1
FAM213AENSG00000122378.91619.171304518.42700-1.4806031.3469029.80110HepG2AKAP1
FAM213AENSG00000122378.91675.350301921.87820-0.198101.969901.30810HepG2AKAP8L
FAM213AENSG00000122378.93028.523203738.69630-0.303902.218701.51140HepG2ASCC1
FAM213AENSG00000122378.91705.591002141.09740-0.328102.935001.49020HepG2ATP5C1
FAM213AENSG00000122378.92770.044702083.214100.411007.167206.14570HepG2AUH
FAM213AENSG00000122378.91927.131601356.151600.506804.449803.33340HepG2BCLAF1
FAM213AENSG00000122378.92760.645801773.413000.6384012.2566010.82420HepG2CALR
FAM213AENSG00000122378.9696.002701141.40790-0.713604.419901.95330HepG2CDC40
FAM213AENSG00000122378.94500.850103551.993900.341502.926102.13150HepG2CIRBP
FAM213AENSG00000122378.91519.596001912.43760-0.331705.658904.76950HepG2CKAP4
FAM213AENSG00000122378.91657.691701228.735700.431902.048701.44680HepG2CPSF6
FAM213AENSG00000122378.92821.969902401.035700.232902.784102.14020HepG2CELF1
FAM213AENSG00000122378.93283.855702581.610200.347007.924206.76550HepG2DAZAP1
FAM213AENSG00000122378.91319.566301769.21660-0.423008.198006.89510HepG2DDX19B
FAM213AENSG00000122378.91003.581801566.10850-0.642008.496907.37880HepG2DDX21
FAM213AENSG00000122378.92066.187301532.267600.431205.132403.88050HepG2DDX24
FAM213AENSG00000122378.93489.884304328.47730-0.310702.262501.69180HepG2DDX3X
FAM213AENSG00000122378.92770.230201922.510100.526906.649904.71620HepG2DDX47
FAM213AENSG00000122378.91231.002901552.59200-0.334802.986501.57740HepG2DDX52
FAM213AENSG00000122378.92610.989401829.230000.513305.746504.34440HepG2DDX5
FAM213AENSG00000122378.92172.112103717.86050-0.775409.581208.50450HepG2DDX6
FAM213AENSG00000122378.92052.047901348.890700.605208.284306.68370HepG2DHX30
FAM213AENSG00000122378.92458.329201830.234400.425507.950906.91600HepG2DKC1
FAM213AENSG00000122378.91710.674401398.552000.290503.149102.40320HepG2DNAJC21
FAM213AENSG00000122378.91147.656101386.15260-0.272403.452902.73870HepG2DNAJC2
FAM213AENSG00000122378.91483.858201852.54670-0.320202.186601.36610HepG2EEF2
FAM213AENSG00000122378.92093.516401441.911700.537804.146802.77660HepG2AGO1
FAM213AENSG00000122378.91025.715801503.92010-0.552104.978203.79080HepG2EIF3D
FAM213AENSG00000122378.92907.043303950.38350-0.442403.526002.80660HepG2EIF4A3
FAM213AENSG00000122378.92590.805603845.89450-0.569904.428203.56870HepG2EIF4B
FAM213AENSG00000122378.92163.206102546.99670-0.235602.750401.91560HepG2EIF4G1
FAM213AENSG00000122378.93038.649602439.845500.316502.649801.85110HepG2EIF4G2
FAM213AENSG00000122378.91907.489202391.64500-0.326302.829702.22310HepG2ETF1
FAM213AENSG00000122378.91887.842702395.86000-0.343802.308901.60220HepG2FIP1L1
FAM213AENSG00000122378.91814.444501277.232000.506404.245202.69750HepG2FKBP4
FAM213AENSG00000122378.91975.818302787.83510-0.496706.511705.33470HepG2FUBP3
FAM213AENSG00000122378.91899.862403985.20340-1.0688020.7081019.00270HepG2FXR1
FAM213AENSG00000122378.91955.598803697.15930-0.9188013.9813012.54720HepG2G3BP1
FAM213AENSG00000122378.9785.107001339.06590-0.770309.924208.28920HepG2GEMIN5
FAM213AENSG00000122378.92166.639601392.688000.637506.357905.41380HepG2GPKOW
FAM213AENSG00000122378.9834.863701493.65130-0.839207.266305.47480HepG2GRSF1
FAM213AENSG00000122378.9969.782101332.46460-0.458402.947901.49810HepG2HNRNPAB
FAM213AENSG00000122378.91148.227801570.51670-0.451804.468803.60230HepG2HNRNPC
FAM213AENSG00000122378.91716.789203743.01120-1.1245026.1229024.19630HepG2HNRNPK
FAM213AENSG00000122378.91673.684502351.62120-0.4906012.7211011.37260HepG2HNRNPL
FAM213AENSG00000122378.93627.130501329.084101.4483023.0486021.51410HepG2HNRNPLL
FAM213AENSG00000122378.9763.178601653.02040-1.1150025.2932022.98540HepG2HNRNPM
FAM213AENSG00000122378.91949.771401639.315100.250101.929201.31620HepG2IGF2BP1
FAM213AENSG00000122378.95016.141003758.187900.416404.045603.24360HepG2IGF2BP2
FAM213AENSG00000122378.92066.221503526.46910-0.771203.253402.18480HepG2IGF2BP3
FAM213AENSG00000122378.93112.428503986.59220-0.357102.828202.16640HepG2MAGOH
FAM213AENSG00000122378.92269.321704008.99700-0.8210010.974609.77820HepG2MATR3
FAM213AENSG00000122378.91117.424101574.03410-0.494302.546601.53440HepG2METAP2
FAM213AENSG00000122378.92223.079704103.50650-0.8843013.5491012.21400HepG2NCBP2
FAM213AENSG00000122378.91738.032102559.92430-0.5586010.037108.61440HepG2NOL12
FAM213AENSG00000122378.92217.563001178.617700.9118013.9779012.43540HepG2NSUN2
FAM213AENSG00000122378.92742.698001474.779600.895006.977305.52410HepG2PABPC1
FAM213AENSG00000122378.91503.474403654.78520-1.2815027.0281024.84080HepG2PABPC4
FAM213AENSG00000122378.91278.884301544.28690-0.272103.040202.15640HepG2PARN
FAM213AENSG00000122378.92940.629903682.41870-0.324505.887505.05520HepG2PCBP1
FAM213AENSG00000122378.91773.907001391.518300.350203.030702.26230HepG2PPIL4
FAM213AENSG00000122378.92177.016401463.007100.5733012.8947011.40810HepG2PRPF4
FAM213AENSG00000122378.92095.940803746.95690-0.8381031.6022030.15670HepG2PTBP1
FAM213AENSG00000122378.92948.349102443.697400.270702.421601.85810HepG2PUF60
FAM213AENSG00000122378.91900.206602594.12260-0.4491011.9024010.85360HepG2PUM1
FAM213AENSG00000122378.92164.505002592.20920-0.260102.490301.85370HepG2PUM2
FAM213AENSG00000122378.92941.837301948.555200.5942017.9011016.57940HepG2PUS1
FAM213AENSG00000122378.91966.396302472.76780-0.330602.922102.04190HepG2RBM15
FAM213AENSG00000122378.92324.310601999.006700.217402.296301.81230HepG2RBM22
FAM213AENSG00000122378.92999.191303682.98560-0.296303.081902.37420HepG2RBM25
FAM213AENSG00000122378.91348.117901837.65490-0.446903.491002.36950HepG2RBM27
FAM213AENSG00000122378.91054.238504170.03800-1.98390151.14940148.78360HepG2NELFE
FAM213AENSG00000122378.91842.534103883.76060-1.0758052.5315050.55430HepG2RECQL
FAM213AENSG00000122378.92150.809801793.006900.262402.121601.51360HepG2RPLP0
FAM213AENSG00000122378.91073.890001463.32280-0.446404.744403.96340HepG2RPS19
FAM213AENSG00000122378.91631.906301389.378600.232002.472501.85750HepG2SAFB2
FAM213AENSG00000122378.91718.339402960.04570-0.784607.247006.11920HepG2SF3A3
FAM213AENSG00000122378.91717.356201315.426900.384601.986401.38320HepG2SF3B1
FAM213AENSG00000122378.92295.700203901.14090-0.7650027.9298026.39000HepG2SF3B4
FAM213AENSG00000122378.92820.231202343.186300.267204.821703.93580HepG2SLBP
FAM213AENSG00000122378.91362.465101871.19940-0.457702.889901.90990HepG2SMNDC1
FAM213AENSG00000122378.91679.625602257.86480-0.426804.617304.01860HepG2SRFBP1
FAM213AENSG00000122378.91819.799404071.91580-1.1619066.0379064.42590HepG2SRSF1
FAM213AENSG00000122378.92607.234903312.69400-0.345506.877106.07690HepG2SRSF9
FAM213AENSG00000122378.92465.338901960.466500.330505.130604.47440HepG2SSB
FAM213AENSG00000122378.91663.826702481.28030-0.576605.376603.65770HepG2SSRP1
FAM213AENSG00000122378.92422.377301714.944400.498203.014301.75580HepG2SUB1
FAM213AENSG00000122378.91804.605802744.02300-0.6046018.6356017.25260HepG2SUCLG1
FAM213AENSG00000122378.91979.934301617.772000.291302.499901.60310HepG2SUPT6H
FAM213AENSG00000122378.92647.545201527.561600.7933010.220209.05710HepG2SUPV3L1
FAM213AENSG00000122378.93141.781803659.91160-0.220202.545902.00540HepG2TAF15
FAM213AENSG00000122378.91862.677001295.922000.523302.730702.01030HepG2TARDBP
FAM213AENSG00000122378.91572.149201023.890100.618605.534504.19470HepG2TFIP11
FAM213AENSG00000122378.92568.542703363.05050-0.388804.974403.86310HepG2TIA1
FAM213AENSG00000122378.91913.609301529.509900.323104.607603.91750HepG2TRIM56
FAM213AENSG00000122378.92018.838302527.09740-0.324002.129901.40130HepG2UBE2L3
FAM213AENSG00000122378.9480.81890902.39910-0.9083010.627709.14580HepG2UCHL5
FAM213AENSG00000122378.93385.491902625.110500.366907.622006.55710HepG2UPF1
FAM213AENSG00000122378.91970.883302534.43710-0.362806.647005.78680HepG2UTP3
FAM213AENSG00000122378.92245.681801451.353200.629704.976403.49080HepG2XPO5
FAM213AENSG00000122378.91381.491802018.13630-0.546803.752602.51460HepG2XRCC6
FAM213AENSG00000122378.92010.629601443.749500.4777010.905609.72090HepG2ZC3H8
FAM213AENSG00000122378.92266.567002887.11540-0.349104.917704.24140HepG2ZNF622
FAM213AENSG00000122378.978.0612038.102701.034602.414901.70630K562GRSF1
FAM213AENSG00000122378.984.7588048.542200.804002.177901.38750K562MBNL1
FAM213AENSG00000122378.9112.4621060.589800.892202.693401.58070K562MSI2
FAM213AENSG00000122378.980.3824043.718700.878502.082401.36060K562PCBP3
FAM213AENSG00000122378.944.6930013.674301.708503.250902.14260K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM213A is not available on ENCORE database.





1 RBPs can affect the splicing of FAM213A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEFAM213AENSG00000122378.9chr10+82169292821694898217340482173632821682498216839982180238821804010.612000.003650.092411includedHepG2NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM213A is not avaliable on ENCORE database.