EMC7

General Information

Gene Name       : EMC7
Gene ID             : ENSG00000134153.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: EMC7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EMC7ENSG00000134153.936.4736.9336.70ENCSR000AEF
HepG2EMC7ENSG00000134153.953.6777.4965.58ENCSR985KAT
K562EMC7ENSG00000134153.973.4862.4167.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EMC7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • EMC7 RNA is bound by 10 proteins.  







eCLIP assay for EMC7 is not avaliable on ENCORE database.





10 proteins are bound to EMC7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr153437640234376441-3'-UTR,intron-Distal,intron-Proximal3.708454.11795K562YBX3
chr153437633034376414-3'-UTR,intron-Distal4.494717.36168HepG2SUB1
chr153437630434376337-3'-UTR,intron-Distal4.569335.61640K562YBX3
chr153437635434376402-3'-UTR,intron-Distal3.224346.13273K562YBX3
chr153437652834376589-3'-UTR,CDS,intron-Distal,intron-Proximal3.697755.23222HepG2SND1
chr153437633734376354-3'-UTR,intron-Distal3.283706.83987K562YBX3
chr153439401734394060-5'-UTR,CDS,intron-Distal,intron-Proximal6.0598327.99210HepG2DDX3X
chr153439391134394034-5'-UTR,CDS,intron-Distal,intron-Proximal4.8673211.19306HepG2RPS3
chr153439396734394017-5'-UTR,CDS,intron-Distal,intron-Proximal5.4513248.62775HepG2DDX3X
chr153439386034394015-5'-UTR,CDS,intron-Distal,intron-Proximal4.472487.30450K562DROSHA
chr153439389734394069-5'-UTR,CDS,intron-Distal,intron-Proximal4.4139529.28093K562DDX3X
chr153438810034388198-CDS,intron-Distal3.836114.50206K562SND1
chr153438252734382563-CDS,intron-Distal4.454184.94988HepG2SND1
chr153438258834382625-CDS,intron-Distal4.367224.55355HepG2SND1
chr153437655534376608-CDS,intron-Distal,intron-Proximal4.799186.69272HepG2LARP4
chr153439381634393912-CDS,intron-Distal3.875175.74442HepG2LIN28B
chr153439382634393911-CDS,intron-Distal4.1258913.35431HepG2RPS3
chr153439383034393916-CDS,intron-Distal3.738955.61462HepG2PRPF4
chr153438025334380273-CDS,intron-Distal,intron-Proximal3.922464.07825K562YBX3
chr153439383534393911-CDS,intron-Distal3.871483.76295K562LIN28B
chr153439384834393899-CDS,intron-Distal3.061233.96118HepG2LARP4
chr153439391834393967-CDS,intron-Distal3.7924713.13583HepG2DDX3X
chr153438811334388178-CDS,intron-Distal5.134139.12064HepG2LIN28B
chr153438258434382644-CDS,intron-Distal4.745827.85193K562YBX3
chr153439383034393914-CDS,intron-Distal4.088705.93121K562FTO
chr153439386634393874-CDS,intron-Distal4.301433.99162HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EMC7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EMC7 is not available on ENCORE database.

  • 103 RBPs can affect the levels of EMC7.  








The Knockdown/knockout RNA-Seq assay for EMC7 is not available on ENCORE database.





103 RBPs can affect the gene expression of EMC7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EMC7ENSG00000134153.51311.49750930.875000.494508.538407.59070HepG2ACO1
EMC7ENSG00000134153.53519.789501948.322900.8532011.0818010.08580HepG2AKAP1
EMC7ENSG00000134153.51489.228701112.717400.420403.742602.12190HepG2ATP5C1
EMC7ENSG00000134153.52105.192701354.631200.6360014.8725013.50470HepG2AUH
EMC7ENSG00000134153.51171.92220929.268000.334602.160801.33670HepG2BCCIP
EMC7ENSG00000134153.51081.24050807.541900.421003.184802.21860HepG2BCLAF1
EMC7ENSG00000134153.52152.88650925.897901.2172028.1304026.55400HepG2BOP1
EMC7ENSG00000134153.52146.840801147.549200.9036020.8519019.10030HepG2CALR
EMC7ENSG00000134153.52082.733201531.581400.443404.021303.09850HepG2CIRBP
EMC7ENSG00000134153.51153.89670930.648900.310103.774403.02000HepG2CKAP4
EMC7ENSG00000134153.51472.337701015.476900.535906.267104.65730HepG2CPSF7
EMC7ENSG00000134153.5898.74520726.601400.306602.566101.58940HepG2YBX3
EMC7ENSG00000134153.51980.926401394.420400.5064012.4497011.05940HepG2DAZAP1
EMC7ENSG00000134153.5960.51380727.617600.400504.017102.64160HepG2DDX1
EMC7ENSG00000134153.51221.06810873.956700.482405.165303.90810HepG2DDX24
EMC7ENSG00000134153.53615.316001866.347800.9538015.9129014.53930HepG2DDX3X
EMC7ENSG00000134153.51284.630101003.201700.356602.654601.66150HepG2DDX5
EMC7ENSG00000134153.52123.294801603.227000.405202.791702.17130HepG2DDX6
EMC7ENSG00000134153.5991.40420688.141600.526703.642802.52550HepG2DHX30
EMC7ENSG00000134153.5991.96860713.471600.475305.678804.70200HepG2DNAJC21
EMC7ENSG00000134153.5941.90330723.224000.381002.580601.50580HepG2EFTUD2
EMC7ENSG00000134153.51234.70790822.405800.586104.360402.95680HepG2AGO1
EMC7ENSG00000134153.5909.75000704.249400.369302.366401.52450HepG2EIF3D
EMC7ENSG00000134153.51286.894001555.31770-0.273303.067102.43890HepG2ETF1
EMC7ENSG00000134153.51239.75860909.610100.446604.534303.46940HepG2EWSR1
EMC7ENSG00000134153.51037.70230760.504700.448303.543602.11640HepG2FKBP4
EMC7ENSG00000134153.51212.477301718.48870-0.503204.573503.70000HepG2FXR1
EMC7ENSG00000134153.51138.036901692.39400-0.572505.852204.54670HepG2G3BP2
EMC7ENSG00000134153.51300.39570963.540400.432403.015302.35060HepG2GPKOW
EMC7ENSG00000134153.51311.02620888.704700.5608010.090508.38080HepG2HDGF
EMC7ENSG00000134153.51738.334401281.546900.439707.200905.81350HepG2HNRNPA2B1
EMC7ENSG00000134153.51052.69970801.206500.393703.023402.30280HepG2HNRNPC
EMC7ENSG00000134153.52088.585801614.217100.371603.222302.47000HepG2HNRNPK
EMC7ENSG00000134153.51551.009801270.188500.288104.044203.24160HepG2HNRNPL
EMC7ENSG00000134153.51188.94810919.526200.370602.554701.94570HepG2HNRNPLL
EMC7ENSG00000134153.52006.895101620.423400.308502.174301.56770HepG2IGF2BP2
EMC7ENSG00000134153.51074.30980850.921700.336204.227902.98090HepG2KIF1C
EMC7ENSG00000134153.5853.625901207.83670-0.500703.034301.72490HepG2KRR1
EMC7ENSG00000134153.51351.722501719.08860-0.346802.352701.74610HepG2MAGOH
EMC7ENSG00000134153.51557.760501007.713400.628308.409707.06790HepG2MSI2
EMC7ENSG00000134153.51571.62700935.780700.747904.810603.61410HepG2PABPC1
EMC7ENSG00000134153.51944.331801575.799200.303101.960201.34370HepG2PABPC4
EMC7ENSG00000134153.51096.10960787.816200.476406.494605.28050HepG2PARN
EMC7ENSG00000134153.51058.910001575.83900-0.5735011.0956010.01260HepG2PCBP1
EMC7ENSG00000134153.51087.08290833.797300.382604.434203.47960HepG2PRPF4
EMC7ENSG00000134153.5956.11740705.013300.439403.427002.53710HepG2PRPF8
EMC7ENSG00000134153.51085.892301603.50080-0.562309.928009.01780HepG2PTBP1
EMC7ENSG00000134153.51677.053101319.935900.345403.165602.53400HepG2PUF60
EMC7ENSG00000134153.51151.46580948.153000.280203.029202.39190HepG2PUS1
EMC7ENSG00000134153.51375.544101736.57630-0.336203.601102.90220HepG2QKI
EMC7ENSG00000134153.51725.78230918.344400.910006.699305.62820HepG2RAVER1
EMC7ENSG00000134153.51626.910701299.953700.323603.662103.08780HepG2RBM22
EMC7ENSG00000134153.5992.542001784.52110-0.8463022.1788020.93300HepG2NELFE
EMC7ENSG00000134153.5874.920801662.07760-0.9258025.8847024.33870HepG2RECQL
EMC7ENSG00000134153.5406.38770909.71830-1.1626017.6558015.76280HepG2RPS2
EMC7ENSG00000134153.51003.36440697.426500.524604.137803.19890HepG2RRP9
EMC7ENSG00000134153.5918.39850708.793600.373702.850402.19880HepG2SAFB2
EMC7ENSG00000134153.51332.33410968.241700.460403.035001.66680HepG2SART3
EMC7ENSG00000134153.52081.921301168.347800.833304.502303.63120HepG2SF3A3
EMC7ENSG00000134153.51234.579701669.40530-0.435306.817705.95510HepG2SF3B4
EMC7ENSG00000134153.51020.71260826.574700.304303.369102.67070HepG2SMN1
EMC7ENSG00000134153.52353.094101012.691801.2163012.6367010.97990HepG2SNRNP70
EMC7ENSG00000134153.51803.930001303.272300.468908.535507.51350HepG2SRSF5
EMC7ENSG00000134153.51615.372301417.646200.188301.878101.40760HepG2SRSF9
EMC7ENSG00000134153.51220.95320840.758500.538106.092604.72810HepG2SUPT6H
EMC7ENSG00000134153.51139.28040909.562200.324802.173401.56360HepG2SUPV3L1
EMC7ENSG00000134153.51448.11880896.307400.692008.693307.50830HepG2TARDBP
EMC7ENSG00000134153.5883.05260609.688000.534304.464303.24340HepG2TFIP11
EMC7ENSG00000134153.51112.00580780.287800.511007.801906.93330HepG2TRIM56
EMC7ENSG00000134153.51731.897601065.151000.701208.667707.54960HepG2U2AF1
EMC7ENSG00000134153.5777.47550537.351600.532804.478903.51270HepG2UCHL5
EMC7ENSG00000134153.51252.558201036.147300.273503.021902.29900HepG2UPF1
EMC7ENSG00000134153.51273.500701065.003900.257802.471901.47310HepG2UTP18
EMC7ENSG00000134153.51357.268601000.357300.440104.014703.31270HepG2UTP3
EMC7ENSG00000134153.51237.12320920.990800.425602.352701.35060HepG2XPO5
EMC7ENSG00000134153.5682.39430895.36230-0.391901.994201.37080HepG2XRN2
EMC7ENSG00000134153.5537.41350822.86500-0.614609.398108.28280HepG2ZC3H8
EMC7ENSG00000134153.52188.918501139.561700.9416040.8973039.43480HepG2ZNF622
EMC7ENSG00000134153.51228.32970987.330200.315003.440102.82000K562AGGF1
EMC7ENSG00000134153.51345.873601084.928200.310802.394301.48980K562AKAP8
EMC7ENSG00000134153.51362.946901027.362200.407703.702802.94400K562AKAP8L
EMC7ENSG00000134153.52351.553001341.051100.8101013.0223011.88390K562AQR
EMC7ENSG00000134153.5654.09030905.93610-0.469904.470103.47430K562CPSF6
EMC7ENSG00000134153.51430.449301816.96890-0.345103.661602.53520K562CELF1
EMC7ENSG00000134153.5776.17370621.400900.320802.799101.46950K562DDX27
EMC7ENSG00000134153.51749.145601183.342800.5637011.097909.89030K562DDX47
EMC7ENSG00000134153.51465.827501105.512800.406905.429404.14750K562DKC1
EMC7ENSG00000134153.5832.43410629.098300.404003.761602.84360K562EIF3G
EMC7ENSG00000134153.5369.77710562.79210-0.605905.651303.67910K562EWSR1
EMC7ENSG00000134153.51071.92630670.498800.6768010.910709.79460K562FXR1
EMC7ENSG00000134153.5652.10070835.20990-0.357002.742501.67420K562HNRNPA1
EMC7ENSG00000134153.51665.94750935.628500.8322010.418908.34900K562HNRNPM
EMC7ENSG00000134153.51959.972501541.996200.345902.978802.15450K562HSPD1
EMC7ENSG00000134153.51442.129401090.286600.403403.877102.87740K562KIF1C
EMC7ENSG00000134153.51333.491101043.673700.353402.605901.57240K562MAK16
EMC7ENSG00000134153.5739.78600919.71690-0.314102.935402.10210K562MTPAP
EMC7ENSG00000134153.51190.06690856.110700.475102.973902.05360K562NAA15
EMC7ENSG00000134153.5734.352901021.92900-0.476707.571206.42180K562NSUN2
EMC7ENSG00000134153.51232.51360794.589200.633202.546201.60710K562PABPN1
EMC7ENSG00000134153.51191.16660568.581701.0668016.2295014.39230K562PRPF8
EMC7ENSG00000134153.52086.524301612.225100.371903.439602.53180K562PUF60
EMC7ENSG00000134153.51763.415001018.858600.7913011.5786010.51560K562PUS1
EMC7ENSG00000134153.51472.67910992.726500.568908.781007.75210K562RBM15
EMC7ENSG00000134153.51043.89450579.200200.849708.980707.49550K562RPS19
EMC7ENSG00000134153.5805.832801008.32220-0.323403.080602.22010K562SF3A3
EMC7ENSG00000134153.5839.627701033.04240-0.299103.210102.20940K562SRPK2
EMC7ENSG00000134153.51175.70340801.699100.552306.435505.36880K562SRSF1
EMC7ENSG00000134153.5412.23070544.87950-0.402502.421401.44640K562SRSF4
EMC7ENSG00000134153.5947.95510730.169500.376503.243902.35490K562SYNCRIP
EMC7ENSG00000134153.5414.54640589.87870-0.508903.214902.20000K562TIAL1
EMC7ENSG00000134153.5486.46180626.72990-0.365502.221201.38740K562TRIM56
EMC7ENSG00000134153.5915.349801083.56970-0.243402.184801.54120K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EMC7 is not available on ENCORE database.





2 RBPs can affect the splicing of EMC7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEEMC7ENSG00000134153.5chr15-343825173438265634380253343803343438809534388210-0.123000.000000.00000excludedK562AQR
A3SSEMC7ENSG00000134153.5chr15-3438025334380487343802533438033434382517343827050.054000.000000.00000longerK562AQR
MXEEMC7ENSG00000134153.5chr15-34382517343826563438809534388210343802533438033434393804343940080.132000.000000.000001includedK562AQR
MXEEMC7ENSG00000134153.5chr15-34382517343826563438809534388243343802533438033434393804343940080.139000.000000.000001includedK562AQR
MXEEMC7ENSG00000134153.5chr15-34382517343826563438809534388246343802533438033434393804343940080.133000.000000.000001includedK562AQR
MXEEMC7ENSG00000134153.5chr15-3438025334380334343825173438265634376217343766873438809534388215-0.086000.004430.032402includedK562AQR
MXEEMC7ENSG00000134153.5chr15-34380253343803343438809534388215343762173437668734393804343941490.074000.000050.003381includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for EMC7 is not avaliable on ENCORE database.