DNAJC19

General Information

Gene Name       : DNAJC19
Gene ID             : ENSG00000205981.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DNAJC19)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DNAJC19ENSG00000205981.714.3625.1819.77ENCSR000AEF
HepG2DNAJC19ENSG00000205981.747.6744.7046.19ENCSR985KAT
K562DNAJC19ENSG00000205981.767.5258.0062.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DNAJC19 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DNAJC19 RNA is bound by 7 proteins.  







eCLIP assay for DNAJC19 is not avaliable on ENCORE database.





7 proteins are bound to DNAJC19 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3180702326180702420-3'-UTR,intron-Distal,intron-Proximal4.967956.91047K562CPEB4
chr3180702360180702433-3'-UTR,CDS,intron-Distal3.3591811.26600K562PUM2
chr3180703753180703785-3'-UTR,CDS,intron-Distal,intron-Proximal3.534664.91258K562YBX3
chr3180702344180702420-3'-UTR,intron-Distal,intron-Proximal4.179753.15159HepG2LARP4
chr3180707391180707482-5'-UTR,intron-Distal,intron-Proximal3.006703.01032HepG2LARP4
chr3180705848180705885-5'-UTR,CDS,intron-Distal,intron-Proximal3.4560013.82971K562DDX3X
chr3180707384180707432-5'-UTR,CDS,intron-Distal,intron-Proximal4.695228.30191HepG2DDX3X
chr3180705999180706017-5'-UTR,CDS,intron-Distal4.7563510.52516K562DDX3X
chr3180705965180705999-5'-UTR,CDS,intron-Distal,intron-Proximal3.5339514.35050K562DDX3X
chr3180707387180707504-5'-UTR,CDS,intron-Distal,intron-Proximal4.065705.39661K562GEMIN5
chr3180707387180707513-5'-UTR,CDS,intron-Distal,intron-Proximal4.1958230.53347K562DDX3X
chr3180707432180707481-5'-UTR,intron-Distal3.881545.22400HepG2DDX3X
chr3180704729180704778-CDS,intron-Distal,intron-Proximal3.603923.02850K562YBX3
chr3180705661180705761-intron-Distal,intron-Proximal3.384433.47285K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DNAJC19 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DNAJC19 is not available on ENCORE database.

  • 58 RBPs can affect the levels of DNAJC19.  








The Knockdown/knockout RNA-Seq assay for DNAJC19 is not available on ENCORE database.





58 RBPs can affect the gene expression of DNAJC19 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DNAJC19ENSG00000205981.2222.52010341.89050-0.619604.840804.07830HepG2ACO1
DNAJC19ENSG00000205981.2354.89320575.59270-0.697708.216307.13740HepG2AUH
DNAJC19ENSG00000205981.2227.30880329.80950-0.537002.808602.20610HepG2BOP1
DNAJC19ENSG00000205981.2199.54420302.78080-0.601603.038802.32280HepG2CPSF6
DNAJC19ENSG00000205981.2168.04450284.37020-0.758904.622803.77130HepG2DDX21
DNAJC19ENSG00000205981.2212.19050307.41250-0.534802.511601.77020HepG2DDX55
DNAJC19ENSG00000205981.2321.75920518.21680-0.687604.458303.68930HepG2DDX6
DNAJC19ENSG00000205981.2427.41000327.087000.385802.422101.78120HepG2DKC1
DNAJC19ENSG00000205981.2363.71860498.26970-0.454102.388801.83600HepG2EIF2S1
DNAJC19ENSG00000205981.2278.98820555.48640-0.993509.531608.31880HepG2FXR1
DNAJC19ENSG00000205981.2307.58160515.36850-0.744605.473104.55070HepG2G3BP1
DNAJC19ENSG00000205981.2347.95070258.216500.430202.009401.44880HepG2HNRNPA1
DNAJC19ENSG00000205981.2370.65000523.88690-0.499202.398601.76500HepG2IGF2BP2
DNAJC19ENSG00000205981.2397.50060555.67970-0.483302.795402.13740HepG2MAGOH
DNAJC19ENSG00000205981.2302.87890558.81240-0.883606.920605.95520HepG2MATR3
DNAJC19ENSG00000205981.2404.92730571.99410-0.498302.866002.22220HepG2NCBP2
DNAJC19ENSG00000205981.2373.05940509.48280-0.449602.075801.44220HepG2PABPC4
DNAJC19ENSG00000205981.2341.84020555.37890-0.700207.267306.46320HepG2PTBP1
DNAJC19ENSG00000205981.2360.03420551.55380-0.615405.385704.46430HepG2PUM2
DNAJC19ENSG00000205981.2375.78940601.45510-0.678506.757205.84400HepG2QKI
DNAJC19ENSG00000205981.2422.24800618.07020-0.549705.228304.52280HepG2NELFE
DNAJC19ENSG00000205981.2458.40880575.67240-0.328602.210501.65230HepG2RECQL
DNAJC19ENSG00000205981.2172.57310240.32430-0.477802.034801.50030HepG2RPS19
DNAJC19ENSG00000205981.2450.03060578.19260-0.361502.572801.99870HepG2SF3B4
DNAJC19ENSG00000205981.2221.09510296.30670-0.422402.390801.78720HepG2SMN1
DNAJC19ENSG00000205981.2449.44160603.51950-0.425303.553303.03400HepG2SRSF1
DNAJC19ENSG00000205981.2323.22970491.00530-0.603205.911505.16000HepG2SRSF9
DNAJC19ENSG00000205981.2772.57310541.648600.512206.060005.35600HepG2SSB
DNAJC19ENSG00000205981.2424.33970583.85600-0.460404.143903.41010HepG2SUCLG1
DNAJC19ENSG00000205981.2435.05340542.49920-0.318401.988901.50030HepG2TAF15
DNAJC19ENSG00000205981.2381.53550498.44860-0.385602.429601.64480HepG2TIA1
DNAJC19ENSG00000205981.2208.80620279.72620-0.421902.341601.81410HepG2TRIM56
DNAJC19ENSG00000205981.2355.85620537.68980-0.595503.194702.29590HepG2UBE2L3
DNAJC19ENSG00000205981.2489.26100301.223500.699704.145403.26580HepG2XRN2
DNAJC19ENSG00000205981.2347.56360437.74850-0.332802.248201.74040HepG2ZNF622
DNAJC19ENSG00000205981.2661.311901301.37210-0.9766015.1887013.96510K562AQR
DNAJC19ENSG00000205981.2447.01390678.51360-0.602102.952902.05120K562BOP1
DNAJC19ENSG00000205981.2553.04760761.42430-0.461302.976301.49500K562BUD13
DNAJC19ENSG00000205981.2632.20830938.69040-0.570202.857001.77350K562CNOT7
DNAJC19ENSG00000205981.2398.52930721.47590-0.856308.516807.12380K562CPSF6
DNAJC19ENSG00000205981.21472.216301199.302900.295702.895001.99780K562DKC1
DNAJC19ENSG00000205981.2400.36380559.24640-0.482203.126302.15210K562EFTUD2
DNAJC19ENSG00000205981.2734.87380892.84060-0.280902.217701.56300K562EIF2S2
DNAJC19ENSG00000205981.2468.62390734.04330-0.647405.884904.62870K562FMR1
DNAJC19ENSG00000205981.2406.65430622.15000-0.613504.651703.43630K562FTO
DNAJC19ENSG00000205981.2454.45490688.84910-0.600105.273004.18460K562GPKOW
DNAJC19ENSG00000205981.2382.89660669.18480-0.805408.771507.75840K562HNRNPC
DNAJC19ENSG00000205981.21511.060901065.358000.504104.979603.92250K562HSPD1
DNAJC19ENSG00000205981.2421.56250672.38630-0.673506.433505.07030K562METAP2
DNAJC19ENSG00000205981.21267.181201613.75410-0.348802.666201.55890K562MSI2
DNAJC19ENSG00000205981.2707.11390860.51640-0.283302.795502.04560K562NSUN2
DNAJC19ENSG00000205981.2604.70250844.54580-0.482004.664803.82470K562PTBP1
DNAJC19ENSG00000205981.21342.036601651.86720-0.299702.142601.42570K562PUF60
DNAJC19ENSG00000205981.21403.054001721.53310-0.295103.017102.01790K562PUM2
DNAJC19ENSG00000205981.2611.76120809.90790-0.404802.993902.11640K562RBM22
DNAJC19ENSG00000205981.2659.69410869.93450-0.399104.485003.32580K562SRPK2
DNAJC19ENSG00000205981.2492.60110827.91810-0.749109.208007.92750K562SRSF1
DNAJC19ENSG00000205981.2484.84370836.91370-0.787603.601901.72290K562STIP1
DNAJC19ENSG00000205981.2362.75510526.88020-0.538503.220202.11930K562SUPV3L1
DNAJC19ENSG00000205981.2678.74710501.262500.437203.554202.62350K562SYNCRIP
DNAJC19ENSG00000205981.2586.91100837.94670-0.513704.214003.33520K562TARDBP
DNAJC19ENSG00000205981.2465.87700613.25930-0.396502.419101.54480K562TRIM56
DNAJC19ENSG00000205981.21480.693801862.41310-0.330902.926501.47990K562UBE2L3
DNAJC19ENSG00000205981.2351.40550557.65510-0.666205.160803.72990K562UCHL5
DNAJC19ENSG00000205981.2708.55990912.42390-0.364803.819102.98750K562UPF1
DNAJC19ENSG00000205981.21128.181801466.10730-0.378003.410702.43700K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DNAJC19 is not available on ENCORE database.





25 RBPs can affect the splicing of DNAJC19 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807037131807037841807058101807058840.069000.004430.06892includedK562SRSF1
SEDNAJC19ENSG00000205981.2chr3-180705965180706017180705810180705884180707387180707491-0.236000.000000.00000excludedK562SF3B4
SEDNAJC19ENSG00000205981.2chr3-1807047851807048101807037131807037841807058101807058840.247000.000970.05844includedHepG2RBM22
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705913-0.112000.000000.00000excludedK562AKAP8L
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703713180703784180705810180705884-0.119000.000010.00370excludedK562FMR1
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807031971807037841807058101807058840.097000.000600.04005includedHepG2AKAP1
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180706051-0.061000.000830.01049excludedK562AQR
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807031971807037841807058101807059130.071000.001730.06027includedK562FXR1
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705913-0.186000.000000.00000excludedK562PUS1
SEDNAJC19ENSG00000205981.2chr3-180705965180706017180705810180705884180707387180707491-0.071000.000090.00971excludedHepG2NCBP2
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807031971807037841807058101807058840.186000.000000.00011includedHepG2PTBP1
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807031971807037841807058101807058840.054000.000510.08435includedK562APOBEC3C
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703713180703784180705810180705884-0.099000.001550.07075excludedK562EFTUD2
SEDNAJC19ENSG00000205981.2chr3-1807059651807060171807058101807058841807073871807074910.081000.000980.09509includedHepG2HNRNPUL1
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807031971807037841807058101807058840.195000.000000.00000includedHepG2SRSF1
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807037131807037841807058101807058840.101000.000960.02986includedHepG2SF3A3
SEDNAJC19ENSG00000205981.2chr3-180705965180706017180705810180705884180707387180707491-0.105000.000010.00059excludedHepG2SF3A3
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807037131807037841807058101807058840.138000.000130.01485includedHepG2IGF2BP3
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705884-0.073000.001760.09467excludedK562HNRNPUL1
SEDNAJC19ENSG00000205981.2chr3-180705965180706017180705810180705884180707387180707491-0.092000.000510.07670excludedK562SRSF7
SEDNAJC19ENSG00000205981.2chr3-1807047301807048101807031971807037841807058101807059130.159000.000010.00059includedHepG2SF3B4
SEDNAJC19ENSG00000205981.2chr3-180705965180706017180705810180705884180707387180707491-0.155000.000000.00000excludedHepG2SF3B4
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705913-0.093000.000000.00014excludedK562UTP18
SEDNAJC19ENSG00000205981.2chr3-1807047851807048101807037131807037841807058101807058840.303000.000890.01810includedK562U2AF2
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703713180703784180705810180705884-0.160000.000000.00002excludedK562TARDBP
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703713180703784180705810180705884-0.150000.000000.00001excludedK562HNRNPU
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705913-0.124000.000000.00000excludedK562RBM15
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705913-0.134000.000000.00000excludedK562AGGF1
SEDNAJC19ENSG00000205981.2chr3-180705965180706017180705810180705884180707387180707491-0.131000.000220.01251excludedK562SF3B1
SEDNAJC19ENSG00000205981.2chr3-180704730180704810180703197180703784180705810180705884-0.063000.000370.05659excludedK562ZC3H8
MXEDNAJC19ENSG00000205981.2chr3-1807037131807037841807058101807058841807020651807024981807073871807074980.101000.000000.000001includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DNAJC19 is not avaliable on ENCORE database.