CCDC85C

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CCDC85C	ENSG00000205476.8	0.43	0.80	0.61	ENCSR000AEF
HepG2	CCDC85C	ENSG00000205476.8	37.66	14.02	25.84	ENCSR985KAT
K562	CCDC85C	ENSG00000205476.8	8.87	4.56	6.71	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CCDC85C is not avaliable on ENCORE database.

Proteins bound to RNA

CCDC85C RNA is bound by 26 proteins.

eCLIP assay for CCDC85C is not avaliable on ENCORE database.

26 proteins are bound to CCDC85C RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	99980958	99981063	-	3'-UTR,intron-Distal	5.65848	26.00811	HepG2	UPF1
chr14	99980119	99980240	-	3'-UTR,intron-Distal	4.05673	8.71030	K562	UPF1
chr14	99981384	99981470	-	3'-UTR,intron-Distal,intron-Proximal	4.73578	19.79568	HepG2	UPF1
chr14	99978582	99978761	-	3'-UTR,intron-Distal	4.42971	13.44564	K562	UPF1
chr14	99980084	99980115	-	3'-UTR,intron-Distal	3.87743	5.91795	HepG2	UPF1
chr14	99981214	99981253	-	3'-UTR,intron-Distal,intron-Proximal	4.25502	9.01880	HepG2	UPF1
chr14	99979792	99979814	-	3'-UTR,intron-Distal	4.22284	3.87385	HepG2	AKAP1
chr14	99978533	99978620	-	3'-UTR,intron-Distal	4.34574	4.61933	HepG2	LARP4
chr14	99979856	99979918	-	3'-UTR,intron-Distal	4.13595	6.42285	HepG2	AKAP1
chr14	99981405	99981472	-	3'-UTR,intron-Distal,intron-Proximal	4.66480	10.79760	HepG2	AKAP1
chr14	99980783	99980798	-	3'-UTR,intron-Distal	4.36845	3.98590	HepG2	AKAP1
chr14	99981070	99981145	-	3'-UTR,intron-Distal	4.28929	8.23922	HepG2	AKAP1
chr14	100002291	100002396	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.20935	6.82513	HepG2	PRPF8
chr14	99980940	99981046	-	3'-UTR,intron-Distal	4.87232	14.79329	HepG2	AKAP1
chr14	99979526	99979573	-	3'-UTR,intron-Distal	4.64956	3.72865	HepG2	LIN28B
chr14	99980434	99980527	-	3'-UTR,intron-Distal	4.85277	13.04711	HepG2	AKAP1
chr14	99980692	99980745	-	3'-UTR,intron-Distal	4.87232	7.76785	HepG2	AKAP1
chr14	99980422	99980509	-	3'-UTR,intron-Distal	4.40909	19.52710	HepG2	UPF1
chr14	99981139	99981207	-	3'-UTR,intron-Distal,intron-Proximal	5.79517	15.41547	HepG2	UPF1
chr14	99980772	99980805	-	3'-UTR,intron-Distal	4.98345	7.70160	HepG2	UPF1
chr14	99980671	99980761	-	3'-UTR,intron-Distal	6.60727	28.09814	HepG2	UPF1
chr14	99980135	99980184	-	3'-UTR,intron-Distal	5.26527	8.87118	HepG2	UPF1
chr14	99981495	99981554	-	3'-UTR,intron-Distal,intron-Proximal	3.98992	10.95291	HepG2	UPF1
chr14	99980800	99980884	-	3'-UTR,intron-Distal	3.69324	7.13548	K562	UPF1
chr14	99980527	99980609	-	3'-UTR,intron-Distal	5.08560	6.11802	HepG2	AKAP1
chr14	99983490	99983513	-	3'-UTR,CDS,intron-Distal	3.89136	3.45716	HepG2	AKAP1
chr14	99981273	99981348	-	3'-UTR,intron-Distal,intron-Proximal	4.92215	15.97458	HepG2	UPF1
chr14	99981176	99981262	-	3'-UTR,intron-Distal,intron-Proximal	3.75043	8.18967	HepG2	AKAP1
chr14	99980834	99980940	-	3'-UTR,intron-Distal	3.69339	11.00226	HepG2	AKAP1
chr14	99979748	99979858	-	3'-UTR,intron-Distal	3.11339	9.90205	HepG2	GRSF1
chr14	99980840	99980941	-	3'-UTR,intron-Distal	5.43871	22.71172	HepG2	UPF1
chr14	99978580	99978667	-	3'-UTR,intron-Distal	4.13038	10.93151	HepG2	UPF1
chr14	99983506	99983519	-	3'-UTR,CDS,intron-Distal	3.56500	4.93514	HepG2	UPF1
chr14	99988977	99989058	-	5'-UTR,intron-Distal,intron-Proximal	3.61958	4.33898	HepG2	FAM120A
chr14	100070231	100070313	-	5'-UTR,CDS,intron-Distal	4.68629	11.89503	HepG2	UPF1
chr14	99988980	99989075	-	5'-UTR,intron-Distal,intron-Proximal	3.76277	4.59965	HepG2	PRPF4
chr14	100042742	100042807	-	5'-UTR,intron-Distal	3.44960	6.28777	HepG2	CSTF2T
chr14	100070251	100070340	-	5'-UTR,CDS,intron-Distal	3.66071	18.54040	HepG2	DDX3X
chr14	100070156	100070251	-	CDS,intron-Distal	4.31419	23.13870	HepG2	DDX3X
chr14	100069793	100069848	-	CDS,intron-Distal	3.11959	6.61223	HepG2	UPF1
chr14	100070177	100070231	-	CDS,intron-Distal	5.16082	9.75816	HepG2	UPF1
chr14	100053356	100053399	-	intron-Distal	3.60462	4.92762	HepG2	CSTF2T
chr14	99984339	99984418	-	intron-Distal	3.47441	7.44912	HepG2	CSTF2T
chr14	100000879	100000936	-	intron-Distal	3.22864	3.28007	HepG2	NKRF
chr14	100046100	100046167	-	intron-Distal	3.30380	5.82968	HepG2	CSTF2T
chr14	99994324	99994407	-	intron-Distal	3.59847	3.67675	HepG2	DDX59
chr14	100053361	100053424	-	intron-Distal	3.17724	5.15026	HepG2	NKRF
chr14	100052465	100052573	-	intron-Distal	4.05841	3.07980	HepG2	HNRNPM
chr14	99992324	99992384	-	intron-Distal	3.52238	9.07843	HepG2	CSTF2T
chr14	99986530	99986632	-	intron-Distal	3.26585	8.17012	HepG2	CSTF2T
chr14	100003478	100003544	-	intron-Distal	4.61760	6.58550	HepG2	CSTF2T
chr14	100044846	100044887	-	intron-Distal	3.27532	3.64175	HepG2	AGGF1
chr14	100017620	100017688	-	intron-Distal	4.46160	5.24346	HepG2	AGGF1
chr14	100048575	100048633	-	intron-Distal	3.35161	3.64140	HepG2	SFPQ
chr14	100001772	100001838	-	intron-Distal	3.74192	3.15816	HepG2	PRPF4
chr14	99994805	99994867	-	intron-Distal	3.48759	7.80319	HepG2	CSTF2T
chr14	100040681	100040758	-	intron-Distal	4.26343	4.05999	HepG2	HNRNPUL1
chr14	100046735	100046822	-	intron-Distal	3.10851	3.00437	HepG2	HNRNPK
chr14	100040032	100040072	-	intron-Distal	3.24783	5.68177	HepG2	CSTF2T
chr14	100045252	100045294	-	intron-Distal	4.40879	5.41529	HepG2	CSTF2T
chr14	99994630	99994669	-	intron-Distal	3.39841	3.48399	HepG2	CSTF2T
chr14	99993958	99994035	-	intron-Distal	3.69360	8.97207	HepG2	CSTF2T
chr14	99986707	99986769	-	intron-Distal	4.25689	3.70291	HepG2	FAM120A
chr14	99984529	99984595	-	intron-Distal	3.65144	3.79474	HepG2	FAM120A
chr14	100039805	100039842	-	intron-Distal	3.51999	4.69054	HepG2	CSTF2T
chr14	100043937	100043996	-	intron-Distal	3.36074	5.13388	HepG2	HNRNPL
chr14	100041416	100041443	-	intron-Distal	3.37360	3.92299	HepG2	CSTF2T
chr14	100002829	100002881	-	intron-Distal	4.22493	3.94684	HepG2	CSTF2T
chr14	100039507	100039564	-	intron-Distal	3.54744	3.52528	HepG2	FAM120A
chr14	99986995	99987034	-	intron-Distal	4.29055	4.43799	HepG2	CSTF2T
chr14	100027228	100027262	-	intron-Distal	4.07387	4.19345	HepG2	CSTF2T
chr14	100054094	100054150	-	intron-Distal	4.05518	7.48189	HepG2	CSTF2T
chr14	100053042	100053149	-	intron-Distal	3.70066	4.36344	HepG2	HNRNPUL1
chr14	100053086	100053157	-	intron-Distal	3.21123	3.18011	HepG2	FAM120A
chr14	100054654	100054715	-	intron-Distal	3.22849	4.74807	HepG2	CSTF2T
chr14	99984473	99984590	-	intron-Distal	4.44441	4.55101	HepG2	PRPF4
chr14	100063804	100063881	-	intron-Distal	4.60848	4.69805	HepG2	NKRF
chr14	100001520	100001591	-	intron-Distal	3.89053	7.10319	HepG2	CSTF2T
chr14	100037351	100037402	-	intron-Distal	3.54615	3.25786	HepG2	FAM120A
chr14	100045769	100045854	-	intron-Distal	4.64966	13.34548	HepG2	CSTF2T
chr14	100001757	100001818	-	intron-Distal	4.78700	6.70034	HepG2	CSTF2T
chr14	100040221	100040264	-	intron-Distal	3.45963	6.36668	HepG2	CSTF2T
chr14	99989590	99989657	-	intron-Distal	3.52112	4.41726	HepG2	NKRF
chr14	100038554	100038609	-	intron-Distal	4.09805	7.48189	HepG2	CSTF2T
chr14	99995637	99995747	-	intron-Distal	3.29620	4.26114	HepG2	HNRNPL
chr14	99993477	99993523	-	intron-Distal	3.13663	5.36249	HepG2	CSTF2T
chr14	100040696	100040757	-	intron-Distal	3.35902	7.22172	HepG2	CSTF2T
chr14	100038554	100038628	-	intron-Distal	3.97515	6.85082	HepG2	FAM120A
chr14	100054040	100054087	-	intron-Distal	3.08651	4.46520	HepG2	CSTF2T
chr14	99992864	99992910	-	intron-Distal	3.24400	4.74807	HepG2	CSTF2T
chr14	100053097	100053200	-	intron-Distal	3.61695	7.70655	HepG2	NKRF
chr14	100058940	100059074	-	intron-Distal	3.15828	3.37567	HepG2	HNRNPK
chr14	100065017	100065099	-	intron-Distal	3.87340	5.35442	HepG2	NKRF
chr14	100003992	100004047	-	intron-Distal	4.04317	4.10564	HepG2	CSTF2T
chr14	100018141	100018219	-	intron-Distal	4.61909	11.15227	HepG2	RBFOX2
chr14	99987023	99987118	-	intron-Distal	3.66537	3.13741	HepG2	FUS
chr14	99988367	99988438	-	intron-Distal,intron-Proximal	4.43263	6.67793	HepG2	EFTUD2
chr14	100057287	100057347	-	intron-Distal	3.36104	3.50045	HepG2	SFPQ
chr14	100027984	100028034	-	intron-Distal	4.35718	4.10339	HepG2	CSTF2T
chr14	100028243	100028321	-	intron-Distal	3.27222	4.88713	HepG2	CSTF2T
chr14	100046528	100046563	-	intron-Distal,intron-Proximal	3.99756	3.44758	HepG2	CSTF2T
chr14	100043269	100043360	-	intron-Distal	3.73245	4.76224	HepG2	NKRF
chr14	100041660	100041692	-	intron-Distal	3.69089	4.45183	HepG2	CSTF2T
chr14	100044266	100044302	-	intron-Distal	3.43629	4.35304	HepG2	AGGF1
chr14	100040689	100040780	-	intron-Distal	5.26549	9.01021	HepG2	FAM120A
chr14	99990208	99990267	-	intron-Distal	3.96268	3.63122	HepG2	PRPF4
chr14	99983880	99983950	-	intron-Distal	3.35441	3.95205	HepG2	NKRF
chr14	100040096	100040139	-	intron-Distal	3.92367	6.10842	HepG2	CSTF2T
chr14	100043479	100043513	-	intron-Distal	4.05335	3.84735	HepG2	AGGF1
chr14	100047865	100047932	-	intron-Distal	3.30115	5.59719	HepG2	CSTF2T
chr14	99985232	99985255	-	intron-Distal	4.82686	13.39233	HepG2	XPO5
chr14	100057565	100057634	-	intron-Distal	3.24400	4.74807	HepG2	CSTF2T
chr14	100037246	100037297	-	intron-Distal	3.18506	4.98353	HepG2	CSTF2T
chr14	100040090	100040134	-	intron-Distal	4.22864	4.03786	HepG2	NKRF
chr14	100027796	100027853	-	intron-Distal	3.00961	6.21569	HepG2	CSTF2T
chr14	100044583	100044630	-	intron-Distal	3.13690	4.00435	HepG2	AGGF1
chr14	99991571	99991620	-	intron-Distal	3.34164	6.58651	HepG2	CSTF2T
chr14	100018189	100018285	-	intron-Distal	4.04086	3.41738	HepG2	PTBP1
chr14	99984533	99984592	-	intron-Distal	3.15314	3.63246	HepG2	CSTF2T
chr14	100045630	100045689	-	intron-Distal	3.46741	6.58651	HepG2	CSTF2T
chr14	100052866	100052932	-	intron-Distal	4.17207	8.29908	HepG2	CSTF2T
chr14	100043269	100043359	-	intron-Distal	4.19517	6.28577	HepG2	FAM120A
chr14	100058624	100058682	-	intron-Distal	3.16329	4.14131	HepG2	DDX59
chr14	100039507	100039581	-	intron-Distal	5.10789	8.46281	HepG2	CSTF2T
chr14	100017653	100017755	-	intron-Distal	3.22745	4.14321	HepG2	HNRNPL
chr14	100001692	100001841	-	intron-Distal	3.39771	6.16126	HepG2	FAM120A
chr14	99986632	99986725	-	intron-Distal	3.14225	6.44311	HepG2	CSTF2T
chr14	100057761	100057812	-	intron-Distal	3.43824	3.96999	HepG2	CSTF2T
chr14	100017117	100017299	-	intron-Distal	4.60214	4.66899	HepG2	HNRNPM
chr14	100053094	100053141	-	intron-Distal	3.58352	6.71496	HepG2	CSTF2T
chr14	100043285	100043339	-	intron-Distal	3.57387	7.32269	HepG2	CSTF2T
chr14	100038609	100038649	-	intron-Distal	4.32704	4.61649	HepG2	CSTF2T
chr14	99990287	99990346	-	intron-Distal	4.69044	4.86316	HepG2	FAM120A
chr14	99995572	99995621	-	intron-Distal	3.75637	5.85439	HepG2	CSTF2T
chr14	99993239	99993285	-	intron-Distal	4.84603	7.19649	HepG2	CSTF2T
chr14	100043460	100043531	-	intron-Distal	3.76060	9.47308	HepG2	CSTF2T
chr14	100032860	100032933	-	intron-Distal	4.81979	6.70034	HepG2	CSTF2T
chr14	99992670	99992737	-	intron-Distal	4.00662	6.61028	HepG2	CSTF2T
chr14	99984526	99984588	-	intron-Distal	4.37651	4.69805	HepG2	NKRF
chr14	100044199	100044242	-	intron-Distal	4.74686	6.18180	HepG2	AGGF1
chr14	99994812	99994873	-	intron-Distal	4.18089	6.28577	HepG2	FAM120A
chr14	100044786	100044918	-	intron-Distal	3.57412	4.19392	HepG2	GTF2F1
chr14	100038714	100038759	-	intron-Distal	4.55167	6.05659	HepG2	CSTF2T
chr14	99994811	99994877	-	intron-Distal	4.44944	5.11005	HepG2	PRPF4
chr14	100037503	100037588	-	intron-Distal	4.47270	4.50934	HepG2	RBFOX2
chr14	99997494	99997522	-	intron-Distal	4.39151	11.84375	HepG2	XPO5
chr14	100033800	100033852	-	intron-Distal	3.12527	3.00221	HepG2	CSTF2T
chr14	99998555	99998618	-	intron-Distal	4.55453	5.07081	HepG2	XPO5
chr14	100040456	100040485	-	intron-Distal	4.31345	4.43799	HepG2	CSTF2T
chr14	100038985	100039034	-	intron-Distal	4.68973	6.19429	HepG2	CSTF2T
chr14	100043908	100044006	-	intron-Distal	3.51447	5.89400	HepG2	GTF2F1
chr14	100027983	100028040	-	intron-Distal	3.32496	3.71694	HepG2	NKRF
chr14	100036814	100036862	-	intron-Distal	3.63349	5.39685	HepG2	CSTF2T
chr14	100043216	100043260	-	intron-Distal	4.01435	3.58932	HepG2	AGGF1
chr14	99993705	99993733	-	intron-Distal	3.08112	4.27427	HepG2	CSTF2T
chr14	100002162	100002293	-	intron-Distal,intron-Proximal	4.14751	3.41442	HepG2	HNRNPK
chr14	100044898	100044949	-	intron-Distal	3.00845	4.51156	HepG2	CSTF2T
chr14	100043277	100043355	-	intron-Distal	4.61396	6.57216	HepG2	PRPF4
chr14	100047765	100047819	-	intron-Distal	3.63412	6.51348	HepG2	CSTF2T
chr14	100038338	100038422	-	intron-Distal	3.29055	7.11670	HepG2	CSTF2T
chr14	99994807	99994890	-	intron-Distal	3.84581	7.27502	HepG2	NKRF
chr14	99988008	99988053	-	intron-Distal	3.57387	5.32871	HepG2	CSTF2T
chr14	100045754	100045862	-	intron-Distal	4.90546	6.37044	HepG2	NKRF
chr14	100032765	100032824	-	intron-Distal	3.39579	3.96999	HepG2	CSTF2T
chr14	99985196	99985232	-	intron-Distal	5.45556	15.30837	HepG2	XPO5
chr14	100035369	100035420	-	intron-Distal	3.83805	4.09469	HepG2	XPO5
chr14	100031520	100031578	-	intron-Distal	4.45856	4.92128	HepG2	CSTF2T
chr14	100057954	100057998	-	intron-Distal	3.28139	3.49516	HepG2	CSTF2T
chr14	99995468	99995510	-	intron-Distal	4.30259	4.92128	HepG2	CSTF2T
chr14	100000968	100001046	-	intron-Distal	3.67859	5.86001	HepG2	CSTF2T
chr14	99990293	99990358	-	intron-Distal	4.00718	3.15816	HepG2	PRPF4
chr14	100040506	100040564	-	intron-Distal	3.33279	8.75909	HepG2	CSTF2T
chr14	100064619	100064675	-	intron-Distal	3.56856	3.50045	HepG2	SFPQ
chr14	100017619	100017724	-	intron-Distal	4.69504	3.80778	HepG2	QKI
chr14	99985269	99985342	-	intron-Distal	3.21263	4.74807	HepG2	CSTF2T
chr14	100041443	100041493	-	intron-Distal	4.91818	7.35173	HepG2	CSTF2T
chr14	100040515	100040591	-	intron-Distal	3.88578	5.05880	HepG2	NKRF
chr14	100017755	100017856	-	intron-Distal	3.54822	3.27276	HepG2	HNRNPL
chr14	100035750	100035863	-	intron-Distal	4.68238	6.08412	HepG2	HNRNPM
chr14	100001714	100001836	-	intron-Distal	3.97652	10.35257	HepG2	NKRF
chr14	100008931	100008973	-	intron-Distal	4.18973	3.69819	HepG2	CSTF2T
chr14	100029701	100029752	-	intron-Distal	4.73054	3.70058	HepG2	XPO5
chr14	100018170	100018268	-	intron-Distal	4.50232	3.05187	HepG2	QKI
chr14	99996404	99996476	-	intron-Distal	3.21404	6.89356	HepG2	CSTF2T
chr14	99988585	99988636	-	intron-Distal,intron-Proximal	3.42673	3.59805	HepG2	SF3B4
chr14	99993733	99993798	-	intron-Distal	3.44770	10.22147	HepG2	CSTF2T
chr14	100043204	100043269	-	intron-Distal	3.03578	4.11989	HepG2	FAM120A
chr14	100028514	100028624	-	intron-Distal	3.64368	3.87101	HepG2	NKRF
chr14	100046739	100046792	-	intron-Distal	3.40921	3.32762	HepG2	DDX59
chr14	99997476	99997494	-	intron-Distal	4.46026	11.84375	HepG2	XPO5
chr14	99990294	99990351	-	intron-Distal	4.52493	5.69834	HepG2	NKRF
chr14	100047502	100047561	-	intron-Distal	3.25848	3.23466	HepG2	CSTF2T
chr14	99987071	99987120	-	intron-Distal	3.67147	5.39685	HepG2	CSTF2T
chr14	100026846	100026890	-	intron-Distal	4.18506	4.19345	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CCDC85C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CCDC85C is not available on ENCORE database.
115 RBPs can affect the levels of CCDC85C.

The Knockdown/knockout RNA-Seq assay for CCDC85C is not available on ENCORE database.

115 RBPs can affect the gene expression of CCDC85C :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CCDC85C	ENSG00000205476.4	478.29970	870.28140	-0.86360	10.77610	8.84900	HepG2	AATF
CCDC85C	ENSG00000205476.4	643.72590	1439.36720	-1.16090	40.39810	38.74370	HepG2	ACO1
CCDC85C	ENSG00000205476.4	660.31000	3089.94680	-2.22640	34.43340	32.83250	HepG2	AKAP1
CCDC85C	ENSG00000205476.4	911.99240	1561.23170	-0.77560	8.31940	6.61690	HepG2	AKAP8
CCDC85C	ENSG00000205476.4	1181.06990	1446.05300	-0.29200	3.33410	2.50140	HepG2	AKAP8L
CCDC85C	ENSG00000205476.4	1618.32880	2556.50570	-0.65970	5.84130	4.72370	HepG2	ASCC1
CCDC85C	ENSG00000205476.4	1227.87590	1943.85790	-0.66280	15.12560	13.74710	HepG2	AUH
CCDC85C	ENSG00000205476.4	764.81610	607.75910	0.33150	1.99890	1.48280	HepG2	BOP1
CCDC85C	ENSG00000205476.4	594.06290	782.88050	-0.39820	3.07110	2.26180	HepG2	CALR
CCDC85C	ENSG00000205476.4	336.68980	1276.52600	-1.92270	14.41600	12.72980	HepG2	CNOT7
CCDC85C	ENSG00000205476.4	1122.95200	723.83270	0.63350	4.42190	3.13540	HepG2	YBX3
CCDC85C	ENSG00000205476.4	1009.73640	1189.31560	-0.23620	2.05620	1.48740	HepG2	CELF1
CCDC85C	ENSG00000205476.4	1522.06820	1331.16600	0.19320	2.06930	1.33870	HepG2	DDX19B
CCDC85C	ENSG00000205476.4	607.91280	959.60430	-0.65860	7.24130	6.19630	HepG2	DDX21
CCDC85C	ENSG00000205476.4	1557.54940	2959.57940	-0.92610	11.01130	9.83970	HepG2	DDX3X
CCDC85C	ENSG00000205476.4	468.31400	888.45540	-0.92380	7.94780	6.71580	HepG2	DDX55
CCDC85C	ENSG00000205476.4	1187.94370	2543.17800	-1.09820	13.13900	11.91230	HepG2	DDX6
CCDC85C	ENSG00000205476.4	918.03550	704.52930	0.38180	1.88280	1.32690	HepG2	DNAJC2
CCDC85C	ENSG00000205476.4	618.29280	857.67900	-0.47210	3.56210	2.29500	HepG2	EFTUD2
CCDC85C	ENSG00000205476.4	573.96990	884.06070	-0.62320	4.47810	3.05800	HepG2	AGO1
CCDC85C	ENSG00000205476.4	1382.40380	2443.98690	-0.82210	9.26400	8.21840	HepG2	EIF2S1
CCDC85C	ENSG00000205476.4	468.61980	835.19850	-0.83370	8.53530	7.03070	HepG2	EIF3D
CCDC85C	ENSG00000205476.4	1267.49560	2700.49040	-1.09120	15.15760	13.67760	HepG2	EIF4A3
CCDC85C	ENSG00000205476.4	1424.81760	2630.07440	-0.88430	6.99910	5.93340	HepG2	EIF4B
CCDC85C	ENSG00000205476.4	1655.15060	1208.56540	0.45360	2.36050	1.60630	HepG2	EIF4G2
CCDC85C	ENSG00000205476.4	1567.30390	2231.80620	-0.50990	10.51270	9.46390	HepG2	ETF1
CCDC85C	ENSG00000205476.4	593.56060	746.53210	-0.33080	2.43130	1.33780	HepG2	FAM120A
CCDC85C	ENSG00000205476.4	612.07400	1481.54500	-1.27530	18.42890	16.75370	HepG2	FIP1L1
CCDC85C	ENSG00000205476.4	1003.46200	1804.47980	-0.84660	15.42420	13.63480	HepG2	FUBP3
CCDC85C	ENSG00000205476.4	1778.58460	2725.89920	-0.61600	5.85440	4.87290	HepG2	FXR1
CCDC85C	ENSG00000205476.4	707.73370	2528.03070	-1.83670	26.55150	24.56470	HepG2	G3BP1
CCDC85C	ENSG00000205476.4	718.93410	954.94580	-0.40960	3.04820	1.97660	HepG2	GNB2L1
CCDC85C	ENSG00000205476.4	1181.93940	632.43320	0.90210	10.33710	9.15350	HepG2	GPKOW
CCDC85C	ENSG00000205476.4	691.72370	1181.88360	-0.77280	4.24200	2.86850	HepG2	GRSF1
CCDC85C	ENSG00000205476.4	958.22100	1175.28080	-0.29460	2.98440	2.01880	HepG2	HNRNPA2B1
CCDC85C	ENSG00000205476.4	1648.40190	894.73910	0.88140	23.87690	22.05840	HepG2	HNRNPF
CCDC85C	ENSG00000205476.4	1095.73160	2561.35550	-1.22500	14.12350	12.66520	HepG2	HNRNPK
CCDC85C	ENSG00000205476.4	582.99220	1021.94960	-0.80980	12.14410	10.39980	HepG2	HNRNPM
CCDC85C	ENSG00000205476.4	1123.99960	1699.47540	-0.59640	4.92360	3.29860	HepG2	HSPD1
CCDC85C	ENSG00000205476.4	1914.66820	881.06050	1.11970	29.11520	27.07170	HepG2	IGF2BP1
CCDC85C	ENSG00000205476.4	1808.49330	2569.46020	-0.50670	4.74540	3.88210	HepG2	IGF2BP2
CCDC85C	ENSG00000205476.4	846.40400	2412.24520	-1.51100	9.31300	7.59320	HepG2	IGF2BP3
CCDC85C	ENSG00000205476.4	1934.72990	2584.86390	-0.41800	2.77200	1.76830	HepG2	KHSRP
CCDC85C	ENSG00000205476.4	646.25420	845.20080	-0.38720	3.04680	1.31840	HepG2	CCAR2
CCDC85C	ENSG00000205476.4	1549.65120	1315.70470	0.23600	2.90520	1.86630	HepG2	KIF1C
CCDC85C	ENSG00000205476.4	1585.60580	2726.85630	-0.78220	7.11370	6.07720	HepG2	MAGOH
CCDC85C	ENSG00000205476.4	416.76160	874.08480	-1.06860	7.87850	6.19400	HepG2	METAP2
CCDC85C	ENSG00000205476.4	988.50250	1198.66410	-0.27810	2.30110	1.56080	HepG2	MSI2
CCDC85C	ENSG00000205476.4	728.91610	1006.61870	-0.46570	4.63460	3.06590	HepG2	NAA15
CCDC85C	ENSG00000205476.4	1906.33160	2806.34670	-0.55790	5.07870	4.23220	HepG2	NCBP2
CCDC85C	ENSG00000205476.4	790.16650	535.18640	0.56200	4.56850	3.61410	HepG2	NSUN2
CCDC85C	ENSG00000205476.4	463.72990	784.65840	-0.75880	3.60740	2.65250	HepG2	PARN
CCDC85C	ENSG00000205476.4	1027.70390	2529.17300	-1.29920	61.14590	58.98350	HepG2	PCBP1
CCDC85C	ENSG00000205476.4	585.16440	964.74870	-0.72130	4.54360	3.23630	HepG2	PCBP2
CCDC85C	ENSG00000205476.4	1187.38350	707.09980	0.74770	7.29260	6.13720	HepG2	PPIL4
CCDC85C	ENSG00000205476.4	1183.14950	2573.49440	-1.12110	46.44040	44.78470	HepG2	PTBP1
CCDC85C	ENSG00000205476.4	1588.40760	1210.50590	0.39190	3.69480	3.01700	HepG2	PUF60
CCDC85C	ENSG00000205476.4	1220.16850	1466.07530	-0.26490	3.12940	2.48280	HepG2	PUS1
CCDC85C	ENSG00000205476.4	2400.63060	2787.22980	-0.21540	2.08970	1.53500	HepG2	QKI
CCDC85C	ENSG00000205476.4	492.24950	930.67200	-0.91890	3.86620	3.03670	HepG2	RAVER1
CCDC85C	ENSG00000205476.4	1108.93100	1407.44400	-0.34390	3.17930	2.26720	HepG2	RBM15
CCDC85C	ENSG00000205476.4	666.87290	1865.37760	-1.48400	54.91180	53.18130	HepG2	RBM22
CCDC85C	ENSG00000205476.4	1253.06580	2529.56310	-1.01340	24.70640	22.80970	HepG2	RBM25
CCDC85C	ENSG00000205476.4	1717.87370	2864.08020	-0.73740	22.52460	21.27140	HepG2	NELFE
CCDC85C	ENSG00000205476.4	1945.37410	2667.45060	-0.45540	9.51690	8.47540	HepG2	RECQL
CCDC85C	ENSG00000205476.4	1656.61770	963.88520	0.78120	3.64590	2.87980	HepG2	RPLP0
CCDC85C	ENSG00000205476.4	1308.29910	914.81130	0.51600	2.96680	1.99050	HepG2	RPS10
CCDC85C	ENSG00000205476.4	636.32060	812.72370	-0.35300	2.54320	1.95140	HepG2	RPS19
CCDC85C	ENSG00000205476.4	267.88820	677.59580	-1.33880	15.41200	13.82010	HepG2	RRP9
CCDC85C	ENSG00000205476.4	1141.83870	705.98480	0.69350	7.97730	6.96910	HepG2	SAFB2
CCDC85C	ENSG00000205476.4	1900.64430	1207.96470	0.65380	5.87090	3.97320	HepG2	SART3
CCDC85C	ENSG00000205476.4	1121.36500	597.36960	0.90850	12.72510	11.32120	HepG2	SF3B1
CCDC85C	ENSG00000205476.4	1414.67380	2679.40030	-0.92140	33.48150	31.83200	HepG2	SF3B4
CCDC85C	ENSG00000205476.4	1807.74220	1160.65380	0.63920	17.03220	15.56420	HepG2	SLBP
CCDC85C	ENSG00000205476.4	318.16160	950.71890	-1.57930	10.41640	8.48650	HepG2	SMNDC1
CCDC85C	ENSG00000205476.4	479.38610	664.68620	-0.47150	2.08200	1.40780	HepG2	SNRNP70
CCDC85C	ENSG00000205476.4	842.97370	2106.87640	-1.32150	60.17940	58.62430	HepG2	SRFBP1
CCDC85C	ENSG00000205476.4	1470.26830	2796.68910	-0.92760	36.48840	35.20150	HepG2	SRSF1
CCDC85C	ENSG00000205476.4	1487.67790	879.05900	0.75890	17.75640	16.26490	HepG2	SRSF7
CCDC85C	ENSG00000205476.4	818.22360	2275.23430	-1.47540	76.45110	74.37810	HepG2	SRSF9
CCDC85C	ENSG00000205476.4	2060.37590	1829.26930	0.17150	1.75480	1.32330	HepG2	SSB
CCDC85C	ENSG00000205476.4	1179.74360	1693.76120	-0.52180	4.05490	2.52460	HepG2	SSRP1
CCDC85C	ENSG00000205476.4	1196.03550	1714.36700	-0.51940	3.75860	2.19140	HepG2	SUGP2
CCDC85C	ENSG00000205476.4	536.42260	884.34270	-0.72120	5.74430	4.82440	HepG2	SUPV3L1
CCDC85C	ENSG00000205476.4	1113.79610	2513.70470	-1.17430	42.13020	40.28140	HepG2	TAF15
CCDC85C	ENSG00000205476.4	830.35880	588.37060	0.49690	3.90850	3.06360	HepG2	TARDBP
CCDC85C	ENSG00000205476.4	1743.31720	2309.82490	-0.40590	5.06870	3.94860	HepG2	TIA1
CCDC85C	ENSG00000205476.4	963.67400	1267.13680	-0.39500	2.70660	2.08370	HepG2	U2AF1
CCDC85C	ENSG00000205476.4	1796.18170	1251.73270	0.52090	4.45090	3.37170	HepG2	UBE2L3
CCDC85C	ENSG00000205476.4	271.80810	522.33950	-0.94240	8.69800	7.34840	HepG2	UCHL5
CCDC85C	ENSG00000205476.4	682.39750	1271.36640	-0.89770	21.20850	19.78060	HepG2	UTP3
CCDC85C	ENSG00000205476.4	674.41280	1023.81700	-0.60230	3.46730	2.28090	HepG2	XRCC6
CCDC85C	ENSG00000205476.4	1140.71620	870.54140	0.38990	2.01620	1.38910	HepG2	XRN2
CCDC85C	ENSG00000205476.4	700.91220	1049.34370	-0.58220	10.04200	8.89560	HepG2	ZC3H8
CCDC85C	ENSG00000205476.4	1271.03960	930.41360	0.45000	2.72340	1.44100	HepG2	ZRANB2
CCDC85C	ENSG00000205476.4	203.80500	397.88150	-0.96510	8.03440	5.98130	K562	ABCF1
CCDC85C	ENSG00000205476.4	334.10450	651.46100	-0.96340	3.74220	3.08040	K562	AQR
CCDC85C	ENSG00000205476.4	113.21100	172.03140	-0.60370	2.09670	1.34270	K562	BOP1
CCDC85C	ENSG00000205476.4	519.15810	797.30790	-0.61900	6.57890	5.09010	K562	CELF1
CCDC85C	ENSG00000205476.4	798.86020	648.39270	0.30100	2.21340	1.36870	K562	EIF4G2
CCDC85C	ENSG00000205476.4	109.58810	186.10900	-0.76410	3.23490	2.30460	K562	FMR1
CCDC85C	ENSG00000205476.4	420.79580	325.47830	0.37050	1.83780	1.32470	K562	FXR1
CCDC85C	ENSG00000205476.4	60.22170	123.91310	-1.04100	3.81220	2.95290	K562	G3BP2
CCDC85C	ENSG00000205476.4	193.85070	378.43070	-0.96510	5.34770	3.16320	K562	HNRNPAB
CCDC85C	ENSG00000205476.4	152.23800	263.40380	-0.79090	4.57450	3.82510	K562	HNRNPC
CCDC85C	ENSG00000205476.4	226.05600	369.02860	-0.70710	2.98560	1.50420	K562	ILF2
CCDC85C	ENSG00000205476.4	159.70500	251.95140	-0.65770	3.33920	1.69080	K562	ILF3
CCDC85C	ENSG00000205476.4	157.89040	243.48140	-0.62490	3.08250	1.51750	K562	KHDRBS1
CCDC85C	ENSG00000205476.4	64.97990	149.11860	-1.19840	4.76400	3.49930	K562	KRR1
CCDC85C	ENSG00000205476.4	465.65740	274.24030	0.76370	7.20890	5.82620	K562	MAGOH
CCDC85C	ENSG00000205476.4	490.13160	359.34490	0.44770	3.02060	2.06180	K562	MBNL1
CCDC85C	ENSG00000205476.4	365.96800	494.81980	-0.43520	3.75210	2.89860	K562	NSUN2
CCDC85C	ENSG00000205476.4	251.94530	388.52320	-0.62490	2.73030	1.50510	K562	PABPC1
CCDC85C	ENSG00000205476.4	590.61840	266.43550	1.14830	16.94930	15.36680	K562	PTBP1
CCDC85C	ENSG00000205476.4	530.82560	752.52720	-0.50350	4.82370	3.38390	K562	PUM1
CCDC85C	ENSG00000205476.4	448.64920	614.36990	-0.45350	3.18110	1.44900	K562	RBM17
CCDC85C	ENSG00000205476.4	162.97440	303.99860	-0.89940	2.92690	1.33530	K562	RBM39
CCDC85C	ENSG00000205476.4	365.85520	261.18640	0.48610	2.71450	2.01330	K562	SRSF1
CCDC85C	ENSG00000205476.4	264.58760	375.27570	-0.50420	2.67130	1.34100	K562	SSRP1
CCDC85C	ENSG00000205476.4	210.81660	343.22670	-0.70320	4.20770	2.60200	K562	STAU1
CCDC85C	ENSG00000205476.4	163.54200	310.45480	-0.92470	3.16310	1.60430	K562	SUPT6H
CCDC85C	ENSG00000205476.4	57.42710	119.93960	-1.06250	3.95310	2.59700	K562	U2AF1
CCDC85C	ENSG00000205476.4	44.24140	123.92790	-1.48600	6.70030	5.45830	K562	U2AF2
CCDC85C	ENSG00000205476.4	408.69250	524.66580	-0.36040	2.71810	2.00510	K562	UPF1
CCDC85C	ENSG00000205476.4	219.27920	411.31260	-0.90750	3.34870	2.02300	K562	UTP3
CCDC85C	ENSG00000205476.4	184.13330	448.94350	-1.28580	16.18220	14.06170	K562	WDR3
CCDC85C	ENSG00000205476.4	419.94260	734.06670	-0.80570	2.98990	2.08770	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CCDC85C is not available on ENCORE database.

1 RBPs can affect the splicing of CCDC85C :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
MXE	CCDC85C	ENSG00000205476.4	chr14	-	99982524	99982623	99983424	99983520	99977602	99981672	99988469	99988577	0.24400	0.00000	0.00012	1included	HepG2	NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CCDC85C

General Information

Functions

Localization

Domains (AlphaFold: CCDC85C)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CCDC85C is not avaliable on ENCORE database.

26 proteins are bound to CCDC85C RNA:

eCLIP assay for CCDC85C is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CCDC85C is not available on ENCORE database.

115 RBPs can affect the gene expression of CCDC85C :

The Knockdown/knockout RNA-Seq assay for CCDC85C is not available on ENCORE database.

1 RBPs can affect the splicing of CCDC85C :

The Knockdown/knockout RNA-Seq assay for CCDC85C is not avaliable on ENCORE database.