CADPS2

General Information

Gene Name       : CADPS2
Gene ID             : ENSG00000081803.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CADPS2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CADPS2ENSG00000081803.150.190.200.20ENCSR000AEF
HepG2CADPS2ENSG00000081803.1511.9020.3416.12ENCSR985KAT
K562CADPS2ENSG00000081803.150.080.050.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CADPS2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CADPS2 RNA is bound by 10 proteins.  







eCLIP assay for CADPS2 is not avaliable on ENCORE database.





10 proteins are bound to CADPS2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7122221266122221318-CDS,intron-Distal4.223453.79199HepG2PPIG
chr7122255241122255349-CDS,intron-Distal3.191835.29017HepG2BCLAF1
chr7122078338122078405-CDS,intron-Distal,intron-Proximal5.354228.72621HepG2PRPF8
chr7122047717122047760-CDS,intron-Distal,intron-Proximal3.616373.95921HepG2U2AF2
chr7122131394122131475-CDS,intron-Distal,intron-Proximal5.054107.39496HepG2BCLAF1
chr7122026345122026429-CDS,intron-Distal,intron-Proximal3.916834.77518HepG2U2AF2
chr7121965611121965674-CDS,intron-Distal,intron-Proximal3.853709.59205HepG2U2AF2
chr7122130153122130258-CDS,intron-Distal3.609794.74886HepG2BCLAF1
chr7122303380122303533-CDS,intron-Distal4.516407.53358HepG2BCLAF1
chr7121985701121985763-CDS,intron-Distal,intron-Proximal3.157903.05068HepG2U2AF2
chr7122483733122483788-intron-Distal3.430984.81844HepG2SUGP2
chr7122482819122482859-intron-Distal4.173694.28663HepG2SUGP2
chr7122122775122122921-intron-Distal3.953773.79098HepG2SUGP2
chr7122483861122483909-intron-Distal3.088733.00129HepG2SUGP2
chr7122508789122508848-intron-Distal3.025973.23296HepG2SUGP2
chr7122474174122474297-intron-Distal4.507734.60209HepG2MATR3
chr7122519222122519296-intron-Distal4.686387.32421HepG2HNRNPC
chr7122070541122070598-intron-Distal3.294803.64762HepG2QKI
chr7122509880122509988-intron-Distal3.078323.22526HepG2QKI
chr7122344213122344294-intron-Distal3.022093.22526HepG2QKI
chr7122474176122474270-intron-Distal3.151733.59523HepG2SUGP2
chr7122508820122508870-intron-Distal3.989463.24322HepG2MATR3
chr7122359232122359315-intron-Distal5.7700610.24238HepG2PCBP2
chr7122484220122484264-intron-Distal3.058033.00129HepG2SUGP2
chr7122483884122483951-intron-Distal4.280534.24431HepG2RBFOX2
chr7122358357122358461-intron-Distal3.806389.63789HepG2PCBP2
chr7122477844122477936-intron-Distal4.353494.32882HepG2MATR3
chr7122482505122482563-intron-Distal4.361874.10336HepG2SUGP2
chr7122283724122283817-intron-Distal5.7901010.24238HepG2PCBP2
chr7122474502122474579-intron-Distal4.530635.83842HepG2SUGP2
chr7122483721122483823-intron-Distal4.589484.31720HepG2MATR3
chr7122070598122070655-intron-Distal3.885093.30440HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CADPS2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CADPS2 is not available on ENCORE database.

  • 95 RBPs can affect the levels of CADPS2.  








The Knockdown/knockout RNA-Seq assay for CADPS2 is not available on ENCORE database.





95 RBPs can affect the gene expression of CADPS2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CADPS2ENSG00000081803.11861.63320631.343900.448503.461802.27130HepG2AATF
CADPS2ENSG00000081803.11919.74810779.455700.238702.060001.52060HepG2ACO1
CADPS2ENSG00000081803.11487.48850744.42890-0.610805.274203.96310HepG2ADAR
CADPS2ENSG00000081803.111327.77590783.179800.7615016.5717014.90790HepG2AKAP8L
CADPS2ENSG00000081803.11924.98620623.184200.569705.599103.68120HepG2ATP5C1
CADPS2ENSG00000081803.11520.92950763.99080-0.552503.505202.49690HepG2BCLAF1
CADPS2ENSG00000081803.11395.60570611.07040-0.627305.226204.43560HepG2BOP1
CADPS2ENSG00000081803.11699.47000517.346800.435003.475602.10320HepG2BUD13
CADPS2ENSG00000081803.11884.18030560.313600.658006.094104.97620HepG2CIRBP
CADPS2ENSG00000081803.111387.91130576.268001.268004.290503.33230HepG2CNOT7
CADPS2ENSG00000081803.111032.60180560.979500.8802011.084409.80780HepG2CPSF6
CADPS2ENSG00000081803.11594.95130763.38870-0.359603.088802.01220HepG2YBX3
CADPS2ENSG00000081803.111197.68780646.275200.889908.089305.44980HepG2CSTF2T
CADPS2ENSG00000081803.111714.797801159.345000.5646013.7135012.27640HepG2DAZAP1
CADPS2ENSG00000081803.11534.34020696.91020-0.383202.622601.95930HepG2DDX21
CADPS2ENSG00000081803.11456.96490864.42430-0.919708.660007.37450HepG2DDX55
CADPS2ENSG00000081803.11512.96230668.93410-0.383002.380801.44080HepG2DDX5
CADPS2ENSG00000081803.11466.11400723.00230-0.633306.078404.66250HepG2DHX30
CADPS2ENSG00000081803.11450.86610749.62700-0.7335010.101708.82550HepG2DNAJC21
CADPS2ENSG00000081803.11632.55050469.004100.431502.711701.61240HepG2EFTUD2
CADPS2ENSG00000081803.11947.18790563.882700.748207.401306.46660HepG2EIF2S1
CADPS2ENSG00000081803.11691.97160456.690800.599404.892603.71600HepG2EIF3D
CADPS2ENSG00000081803.11835.07640623.234100.422002.560501.94490HepG2EIF4A3
CADPS2ENSG00000081803.11426.31120606.65810-0.509002.447101.79920HepG2EIF4B
CADPS2ENSG00000081803.11722.248901450.39640-1.0059027.7992026.22630HepG2ETF1
CADPS2ENSG00000081803.111117.25920761.733700.552506.240904.98680HepG2EWSR1
CADPS2ENSG00000081803.11556.62130408.141800.447503.388902.08080HepG2FAM120A
CADPS2ENSG00000081803.111096.75940663.979900.723909.369507.47820HepG2FASTKD2
CADPS2ENSG00000081803.11319.41640561.97520-0.815103.049801.98300HepG2FTO
CADPS2ENSG00000081803.11445.57680298.944000.575704.107803.15800HepG2FUBP3
CADPS2ENSG00000081803.111536.03610790.265500.958709.517207.60560HepG2FUS
CADPS2ENSG00000081803.111088.11930628.582900.791608.778907.60740HepG2FXR1
CADPS2ENSG00000081803.11845.37230619.008200.449503.151702.20000HepG2G3BP2
CADPS2ENSG00000081803.11612.00130816.54280-0.416002.595701.61140HepG2GNB2L1
CADPS2ENSG00000081803.11867.98030533.405400.702304.727303.28300HepG2GRSF1
CADPS2ENSG00000081803.111163.62130744.764800.643703.192401.49790HepG2GTF2F1
CADPS2ENSG00000081803.111142.11250757.504400.592303.121301.64670HepG2HLTF
CADPS2ENSG00000081803.11523.43460756.80800-0.531904.332403.54760HepG2HNRNPA1
CADPS2ENSG00000081803.11652.01770841.79140-0.368602.489701.82910HepG2HNRNPC
CADPS2ENSG00000081803.11335.07310499.14240-0.575003.156601.53930HepG2HNRNPD
CADPS2ENSG00000081803.11639.73370827.68150-0.371603.871003.03620HepG2HNRNPF
CADPS2ENSG00000081803.111277.513401056.062300.274503.372502.63490HepG2HNRNPL
CADPS2ENSG00000081803.11455.63110606.82570-0.413402.418801.82470HepG2HNRNPLL
CADPS2ENSG00000081803.11690.63780836.22730-0.276002.287501.73090HepG2HNRNPU
CADPS2ENSG00000081803.11677.79720468.741700.532003.053801.75440HepG2HSPD1
CADPS2ENSG00000081803.11659.34470815.02490-0.305802.314901.65090HepG2IGF2BP1
CADPS2ENSG00000081803.11797.97490592.880300.428502.842202.15940HepG2IGF2BP2
CADPS2ENSG00000081803.111060.37850556.216000.930803.735702.59070HepG2IGF2BP3
CADPS2ENSG00000081803.11286.17350561.74900-0.973007.128404.93970HepG2ILF3
CADPS2ENSG00000081803.111281.46650632.358701.0189012.6554011.37570HepG2MATR3
CADPS2ENSG00000081803.11283.46330477.97750-0.753803.264002.12150HepG2METAP2
CADPS2ENSG00000081803.11407.21990564.33670-0.470703.091402.23870HepG2MSI2
CADPS2ENSG00000081803.11427.88460793.68500-0.891305.157103.63980HepG2NONO
CADPS2ENSG00000081803.11229.00110526.62340-1.201408.531606.93030HepG2PABPC1
CADPS2ENSG00000081803.11815.64880576.592000.500303.611702.79400HepG2PABPC4
CADPS2ENSG00000081803.111047.82280827.743900.340003.574802.62360HepG2PARN
CADPS2ENSG00000081803.111049.94270617.553200.7656014.3189013.11520HepG2PCBP1
CADPS2ENSG00000081803.11285.64570516.72490-0.855205.275103.20600HepG2PNPT1
CADPS2ENSG00000081803.11541.15800745.85100-0.462804.649103.71900HepG2PPIL4
CADPS2ENSG00000081803.111027.86600628.358200.7099011.9386010.96020HepG2PTBP1
CADPS2ENSG00000081803.11781.644001097.41090-0.489504.735003.98080HepG2PUF60
CADPS2ENSG00000081803.111083.85780680.581300.671205.573104.73310HepG2QKI
CADPS2ENSG00000081803.111198.31260699.323300.7769014.5515013.49420HepG2NELFE
CADPS2ENSG00000081803.111104.15860651.286500.7615013.9356012.71670HepG2RECQL
CADPS2ENSG00000081803.11460.14910891.69160-0.9544013.2000011.90900HepG2RPLP0
CADPS2ENSG00000081803.11297.82550444.36900-0.577303.902503.18390HepG2RPS19
CADPS2ENSG00000081803.111147.97420785.444700.547403.140001.51270HepG2RTF1
CADPS2ENSG00000081803.11346.36510544.66960-0.653104.190802.58980HepG2SART3
CADPS2ENSG00000081803.11590.38280446.011300.404502.308201.44590HepG2SERBP1
CADPS2ENSG00000081803.11534.84680775.87990-0.536703.252302.52040HepG2SF3A3
CADPS2ENSG00000081803.11956.98820654.247300.548607.047406.17230HepG2SF3B4
CADPS2ENSG00000081803.11695.946801052.27270-0.5965010.331309.11320HepG2SLBP
CADPS2ENSG00000081803.11680.04640868.47250-0.352803.983003.23340HepG2SMN1
CADPS2ENSG00000081803.11415.69660668.29500-0.685003.854602.92490HepG2SNRNP70
CADPS2ENSG00000081803.111010.89640682.874000.565807.791107.09070HepG2SRSF1
CADPS2ENSG00000081803.11919.365201083.54900-0.237102.022601.47700HepG2SRSF5
CADPS2ENSG00000081803.11652.65960813.18720-0.317303.082202.35340HepG2SRSF7
CADPS2ENSG00000081803.11418.03740555.53850-0.410303.608502.99670HepG2SRSF9
CADPS2ENSG00000081803.111666.305001188.779500.487109.022808.20020HepG2SSB
CADPS2ENSG00000081803.11239.98960465.75090-0.956607.442105.54550HepG2STAU1
CADPS2ENSG00000081803.11267.45430503.05260-0.911407.221505.38940HepG2STIP1
CADPS2ENSG00000081803.111545.994701232.280400.327104.698203.92520HepG2SUCLG1
CADPS2ENSG00000081803.11335.98330470.84290-0.486902.793601.84930HepG2SUPT6H
CADPS2ENSG00000081803.11348.41220860.54680-1.3045016.2918014.89160HepG2SUPV3L1
CADPS2ENSG00000081803.11915.03650591.586200.629106.108205.08980HepG2TARDBP
CADPS2ENSG00000081803.11563.81150812.61700-0.527403.731303.16900HepG2TIAL1
CADPS2ENSG00000081803.11494.46900819.81040-0.7294012.0403010.98480HepG2TRIM56
CADPS2ENSG00000081803.11848.74210596.422500.508903.911003.16890HepG2U2AF1
CADPS2ENSG00000081803.11536.89350788.06520-0.553702.801301.78970HepG2UPF2
CADPS2ENSG00000081803.111033.89270707.264700.547707.742206.09640HepG2UTP18
CADPS2ENSG00000081803.111099.74950793.929500.470002.623501.59530HepG2XRCC6
CADPS2ENSG00000081803.11577.28750847.11320-0.553303.919803.06500HepG2XRN2
CADPS2ENSG00000081803.11771.97850528.321800.547007.133106.13570HepG2ZC3H8
CADPS2ENSG00000081803.11411.61000756.76420-0.8786017.1280016.05720HepG2ZNF622
CADPS2ENSG00000081803.111126.03830721.284000.642504.788603.03530HepG2ZRANB2
CADPS2ENSG00000081803.119.642300.550904.129302.026501.50500K562HNRNPC
CADPS2ENSG00000081803.1124.203604.717902.358902.286601.54500K562PUF60
CADPS2ENSG00000081803.1115.961901.657503.267502.490201.71680K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CADPS2 is not available on ENCORE database.





1 RBPs can affect the splicing of CADPS2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECADPS2ENSG00000081803.11chr7-1220764131220764341220561141220562181220783941220784300.435000.000480.00756includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CADPS2 is not avaliable on ENCORE database.