BRI3

General Information

Gene Name       : BRI3
Gene ID             : ENSG00000164713.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BRI3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BRI3ENSG00000164713.96.2610.828.54ENCSR000AEF
HepG2BRI3ENSG00000164713.951.8740.4846.17ENCSR985KAT
K562BRI3ENSG00000164713.918.7811.3715.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BRI3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BRI3 RNA is bound by 22 proteins.  







eCLIP assay for BRI3 is not avaliable on ENCORE database.





22 proteins are bound to BRI3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr79792069497920750+3'-UTR,intron-Distal5.235699.39648K562PABPC4
chr79792064197920697+3'-UTR,intron-Distal3.114128.72722K562PUM2
chr79792055797920625+3'-UTR,intron-Distal5.108798.47376K562PUM2
chr79792065397920751+3'-UTR,intron-Distal3.092673.28380K562IGF2BP2
chr79792077797920816+3'-UTR,intron-Distal4.252593.54514K562TIA1
chr79792064797920709+3'-UTR,intron-Distal4.062416.86123K562DDX6
chr79792063397920748+3'-UTR,intron-Distal3.362848.46486HepG2DDX55
chr79792062897920697+3'-UTR,intron-Distal3.984784.03691K562PUM1
chr79791099197911085+5'-UTR,intron-Distal5.144994.78334K562IGF2BP2
chr79791107597911115+5'-UTR,CDS,intron-Distal5.0026127.82458HepG2DDX3X
chr79791104097911160+5'-UTR,CDS,intron-Distal6.087058.00105K562DDX3X
chr79791101597911075+5'-UTR,intron-Distal4.6413633.14191HepG2DDX3X
chr79791106297911138+5'-UTR,CDS,intron-Distal4.056743.97432K562GEMIN5
chr79791172297911765+CDS4.205604.54534K562IGF2BP2
chr79792042197920461+CDS,intron-Distal,intron-Proximal5.265959.01147K562METAP2
chr79791168497911738+CDS3.071193.94523HepG2IGF2BP3
chr79792044497920496+CDS,intron-Distal3.257256.64273K562YBX3
chr79791170797911766+CDS,intron-Proximal3.7961510.57674K562METAP2
chr79792036897920440+CDS,intron-Distal,intron-Proximal3.726955.93727K562SF3B4
chr79791170597911767+CDS,intron-Proximal3.453494.10134HepG2LARP4
chr79792048497920543+CDS,intron-Distal3.421744.36276HepG2LARP4
chr79791172797911766+CDS,intron-Proximal3.2647513.91382K562YBX3
chr79791660097916665+intron-Distal3.396434.22628K562EWSR1
chr79791285497912910+intron-Distal3.441713.67103HepG2FKBP4
chr79791457797914684+intron-Distal4.029948.40843HepG2PRPF4
chr79791536197915416+intron-Distal4.393095.54639K562CSTF2T
chr79791536597915428+intron-Distal3.6830110.26241HepG2CSTF2T
chr79791459797914670+intron-Distal5.0551817.35649HepG2CSTF2T
chr79791682597916874+intron-Distal4.103113.70058K562CSTF2T
chr79791525897915291+intron-Distal3.886116.61028HepG2CSTF2T
chr79791526097915310+intron-Distal4.188904.70168K562CSTF2T
chr79791433997914386+intron-Distal3.424656.73713HepG2CSTF2T
chr79791458697914677+intron-Distal3.358969.48128HepG2FAM120A
chr79791375797913809+intron-Distal3.234003.73797K562CSTF2T
chr79791425497914382+intron-Distal4.910006.64314K562CSTF2T
chr79791659097916652+intron-Distal3.903433.03048HepG2GTF2F1
chr79791458397914668+intron-Distal3.535143.85148K562GTF2F1
chr79791354797913604+intron-Distal4.6968510.49886HepG2XPO5
chr79791705497917131+intron-Distal3.238926.57490HepG2CSTF2T
chr79791369397913728+intron-Distal3.593415.08839HepG2CSTF2T
chr79791390997913949+intron-Distal3.629084.84557HepG2CSTF2T
chr79791659497916669+intron-Distal4.683346.09301K562CSTF2T
chr79791526397915294+intron-Distal3.726943.94566HepG2FKBP4
chr79791481497914905+intron-Distal3.6410010.16757HepG2CSTF2T
chr79791503497915095+intron-Distal4.211803.59342K562CSTF2T
chr79791354897913589+intron-Distal3.658835.86001HepG2CSTF2T
chr79791269897912757+intron-Distal3.818336.73995HepG2CSTF2T
chr79791705997917118+intron-Distal3.148464.20198HepG2FAM120A
chr79791459497914676+intron-Distal3.732268.38555K562CSTF2T
chr79791355097913601+intron-Distal4.470154.57154HepG2FAM120A
chr79791475197914850+intron-Distal3.158354.62806K562CSTF2T
chr79791341497913495+intron-Distal3.284255.62476K562EWSR1
chr79791460597914667+intron-Distal3.748705.40390K562EWSR1
chr79791363097913658+intron-Distal5.6639618.91594HepG2XPO5
chr79791681197916873+intron-Distal3.595423.54519HepG2FKBP4
chr79791682797916899+intron-Distal4.043528.19675HepG2CSTF2T
chr79791338097913416+intron-Distal3.195405.59719HepG2CSTF2T
chr79791360797913630+intron-Distal6.9306821.03039HepG2XPO5
chr79791706997917110+intron-Distal4.338143.25012HepG2FKBP4
chr79791459797914662+intron-Distal3.304583.68574HepG2FKBP4
chr79791458397914663+intron-Distal3.835905.01332HepG2GTF2F1
chr79791339397913446+intron-Distal5.121195.93132HepG2FKBP4
chr79791578297915822+intron-Distal3.898416.26465HepG2CSTF2T
chr79793106297931224+intron-Distal4.789905.43245K562SLTM
chr79791189697911965+intron-Distal3.846533.17740K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BRI3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BRI3 is not available on ENCORE database.

  • 72 RBPs can affect the levels of BRI3.  








The Knockdown/knockout RNA-Seq assay for BRI3 is not available on ENCORE database.





72 RBPs can affect the gene expression of BRI3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BRI3ENSG00000164713.5544.65740359.358600.599806.574405.71860HepG2ACO1
BRI3ENSG00000164713.5490.68920360.970600.442803.494102.64320HepG2AKAP8L
BRI3ENSG00000164713.5815.71500615.666300.405804.341303.51540HepG2AUH
BRI3ENSG00000164713.5254.77090183.976100.469601.930701.42340HepG2BOP1
BRI3ENSG00000164713.5839.55070598.396600.488403.513202.64860HepG2CIRBP
BRI3ENSG00000164713.5469.43340359.188700.386102.934102.25370HepG2CKAP4
BRI3ENSG00000164713.5260.63230168.897200.625802.963602.25480HepG2CPSF6
BRI3ENSG00000164713.5679.61780490.201500.471204.639803.84580HepG2CELF1
BRI3ENSG00000164713.5729.10740527.081300.468005.584804.58210HepG2DAZAP1
BRI3ENSG00000164713.5132.37930262.46580-0.987506.680505.67610HepG2DDX21
BRI3ENSG00000164713.5260.97230358.77070-0.459202.140001.45180HepG2DDX55
BRI3ENSG00000164713.5466.88320343.785100.441503.194102.47500HepG2DKC1
BRI3ENSG00000164713.5439.15480602.11860-0.455302.658502.07740HepG2EIF2S1
BRI3ENSG00000164713.5602.45630351.076100.779008.256106.82670HepG2EWSR1
BRI3ENSG00000164713.5444.26560622.82030-0.487403.000902.30950HepG2G3BP1
BRI3ENSG00000164713.5251.95660177.234600.507402.106801.32990HepG2GEMIN5
BRI3ENSG00000164713.5881.60790633.035000.477803.444602.69920HepG2IGF2BP2
BRI3ENSG00000164713.5399.34170636.81510-0.673304.330203.04710HepG2KHSRP
BRI3ENSG00000164713.5676.21470368.556800.875507.128005.78170HepG2LARP4
BRI3ENSG00000164713.5468.71190671.77970-0.519303.454402.72010HepG2MAGOH
BRI3ENSG00000164713.5183.21980262.43050-0.518402.469101.70310HepG2MSI2
BRI3ENSG00000164713.5479.77250691.37550-0.527103.524202.81350HepG2NCBP2
BRI3ENSG00000164713.5692.92900483.452400.519202.280201.48890HepG2PABPC1
BRI3ENSG00000164713.5364.14590623.19400-0.7752010.554509.49210HepG2PCBP1
BRI3ENSG00000164713.5496.03140311.178400.672603.604102.22500HepG2PRPF6
BRI3ENSG00000164713.5349.63960634.10460-0.8589011.2985010.33970HepG2PTBP1
BRI3ENSG00000164713.5645.56860498.919600.371702.402301.84120HepG2PUF60
BRI3ENSG00000164713.5700.74790529.627000.403804.252903.55110HepG2PUM1
BRI3ENSG00000164713.5494.33110686.79070-0.474404.171603.42610HepG2QKI
BRI3ENSG00000164713.5641.30970285.619801.166808.078006.91200HepG2RAVER1
BRI3ENSG00000164713.51135.06930590.806300.9419016.5126015.46210HepG2RBM22
BRI3ENSG00000164713.5365.28170623.29170-0.770908.201507.09070HepG2RBM25
BRI3ENSG00000164713.5456.05760657.24770-0.527205.449704.62110HepG2RECQL
BRI3ENSG00000164713.5691.02940431.688000.678706.048305.09520HepG2RPLP0
BRI3ENSG00000164713.5440.56680280.656500.650503.271902.24470HepG2RPS10
BRI3ENSG00000164713.5432.13880273.681500.658903.508802.63780HepG2RRP9
BRI3ENSG00000164713.5539.01180327.767500.717503.152202.43260HepG2SF3A3
BRI3ENSG00000164713.5263.19240180.837600.541302.345601.69330HepG2SF3B1
BRI3ENSG00000164713.5470.65940660.21820-0.488304.745004.00190HepG2SF3B4
BRI3ENSG00000164713.5393.30390310.028500.343102.100201.52890HepG2SMN1
BRI3ENSG00000164713.51124.96130667.296300.7534015.0618014.14060HepG2SRFBP1
BRI3ENSG00000164713.5501.11160689.11120-0.459604.517903.95030HepG2SRSF1
BRI3ENSG00000164713.5691.79510492.612600.489805.163404.34980HepG2SRSF5
BRI3ENSG00000164713.5806.07840579.375200.476305.634704.95300HepG2SSB
BRI3ENSG00000164713.5468.60600619.36210-0.402403.317802.71240HepG2TAF15
BRI3ENSG00000164713.5269.00580178.101900.594802.822502.09170HepG2TARDBP
BRI3ENSG00000164713.5185.90510337.36670-0.859803.464102.27470HepG2TBRG4
BRI3ENSG00000164713.5403.16320290.094400.474702.988202.47140HepG2TIAL1
BRI3ENSG00000164713.5467.64920210.948001.148405.883404.76710HepG2UCHL5
BRI3ENSG00000164713.5478.94700319.692300.583105.962905.23990HepG2ZNF622
BRI3ENSG00000164713.5487.53040233.250501.0635014.1554012.97450K562AGGF1
BRI3ENSG00000164713.5364.55820256.322500.508103.143202.08100K562AKAP8
BRI3ENSG00000164713.5478.23410242.711500.9784010.256608.89510K562AKAP8L
BRI3ENSG00000164713.5458.38730305.399400.585803.890403.21820K562AQR
BRI3ENSG00000164713.5126.6967073.894500.777702.440701.62650K562BOP1
BRI3ENSG00000164713.5160.3478078.575501.029004.851403.81700K562CPSF6
BRI3ENSG00000164713.5445.03540309.980900.521602.854101.86560K562CELF1
BRI3ENSG00000164713.5185.94000105.056200.823604.025702.99010K562FIP1L1
BRI3ENSG00000164713.5130.3788079.940000.705602.280101.50120K562FMR1
BRI3ENSG00000164713.557.90020151.03820-1.383303.213502.44270K562G3BP2
BRI3ENSG00000164713.5266.90760103.667201.364306.055403.99490K562HNRNPA2B1
BRI3ENSG00000164713.5348.87690257.564200.437702.422601.65700K562KIF1C
BRI3ENSG00000164713.5377.66270246.563100.615003.582202.30830K562MAK16
BRI3ENSG00000164713.5304.5164090.622301.748509.441407.23110K562PABPN1
BRI3ENSG00000164713.589.49570146.00760-0.706202.623801.84700K562POLR2G
BRI3ENSG00000164713.5211.77140119.274300.828104.512903.42950K562PPIG
BRI3ENSG00000164713.5283.04340107.683701.394105.940003.52720K562PPP1R8
BRI3ENSG00000164713.5443.08540292.558800.598803.726502.47170K562PUM1
BRI3ENSG00000164713.5533.90890240.676001.1494012.7558011.63640K562PUS1
BRI3ENSG00000164713.5392.59720234.525000.743202.274201.72750K562RBM15
BRI3ENSG00000164713.5244.18650111.482601.131103.841701.95130K562RBM39
BRI3ENSG00000164713.5217.1546082.843501.390204.788703.06830K562SF1
BRI3ENSG00000164713.5208.00700100.947501.042903.326801.84590K562SFPQ
BRI3ENSG00000164713.5225.6993095.191901.245404.528402.84060K562SNRNP200
BRI3ENSG00000164713.5132.54560204.35100-0.624602.743902.03940K562SRSF1
BRI3ENSG00000164713.5282.27810192.995800.548402.894001.81680K562SRSF5
BRI3ENSG00000164713.5326.62200113.829301.520706.491204.04030K562SUPT6H
BRI3ENSG00000164713.5287.41850206.815100.474702.041001.42720K562TARDBP
BRI3ENSG00000164713.5266.78870111.988401.252204.781302.41700K562YTHDC2
BRI3ENSG00000164713.5485.28150344.042600.496103.351902.39050K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BRI3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of BRI3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for BRI3 is not avaliable on ENCORE database.