ATP11C

General Information

Gene Name       : ATP11C
Gene ID             : ENSG00000101974.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATP11C)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATP11CENSG00000101974.1424.1319.8221.98ENCSR000AEF
HepG2ATP11CENSG00000101974.145.7013.339.52ENCSR985KAT
K562ATP11CENSG00000101974.1416.5217.9017.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATP11C is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATP11C RNA is bound by 17 proteins.  







eCLIP assay for ATP11C is not avaliable on ENCORE database.





17 proteins are bound to ATP11C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX138809348138809410-3'-UTR,intron-Distal3.067873.46531K562KHSRP
chrX138810402138810492-3'-UTR,intron-Distal4.153526.44064K562LIN28B
chrX138810430138810498-3'-UTR,intron-Distal5.075258.46231HepG2LIN28B
chrX139014638139014727-5'-UTR,intron-Distal3.080819.14267HepG2DDX3X
chrX139014603139014714-5'-UTR,intron-Distal3.533044.99558HepG2GTF2F1
chrX139014868139014910-5'-UTR,intron-Distal5.801438.66376HepG2DDX3X
chrX139014289139014393-5'-UTR,intron-Distal3.886685.61462HepG2PRPF4
chrX139014292139014361-5'-UTR,intron-Distal3.295688.22028HepG2DDX3X
chrX139014207139014309-5'-UTR,intron-Distal4.763674.11950K562DDX3X
chrX139014622139014764-5'-UTR,intron-Distal4.5178910.81740HepG2PRPF4
chrX138845473138845533-CDS,intron-Distal,intron-Proximal4.130115.79432HepG2BCLAF1
chrX138856850138856911-CDS,intron-Distal4.255564.21675K562ZNF622
chrX138879408138879481-CDS,intron-Distal,intron-Proximal3.935467.65820K562PUM2
chrX138897118138897145-CDS,intron-Distal,intron-Proximal4.187843.71570HepG2BCLAF1
chrX138856911138856985-CDS,intron-Distal4.248653.87582K562ZNF622
chrX138844231138844266-CDS,intron-Distal,intron-Proximal3.906385.65086HepG2BCLAF1
chrX138856861138856912-CDS,intron-Distal3.345604.34695HepG2BCLAF1
chrX138871485138871519-CDS,intron-Distal,intron-Proximal4.187843.71570HepG2BCLAF1
chrX138880874138880903-CDS,intron-Distal,intron-Proximal3.783466.59132K562YBX3
chrX138886639138886678-CDS,intron-Distal4.010013.25175K562YBX3
chrX138879368138879459-CDS,intron-Distal,intron-Proximal3.644656.39464HepG2BCLAF1
chrX138870468138870502-CDS,intron-Distal4.067343.06595HepG2BCLAF1
chrX138864705138864731-CDS,intron-Distal,intron-Proximal4.469144.70478HepG2BCLAF1
chrX138878501138878574-CDS,intron-Distal3.691293.25175K562YBX3
chrX138839966138840019-CDS,intron-Distal,intron-Proximal4.166843.89948K562YBX3
chrX138882217138882264-CDS,intron-Distal,intron-Proximal3.953967.40140K562YBX3
chrX138857040138857113-CDS,intron-Distal,intron-Proximal4.176665.79432HepG2BCLAF1
chrX138899055138899103-CDS,intron-Distal,intron-Proximal3.046033.40766K562PUM2
chrX138835938138836021-intron-Distal3.966073.28841HepG2PTBP1
chrX138935411138935598-intron-Distal4.5636011.94954K562PTBP1
chrX138847953138848071-intron-Distal3.290043.79878K562MATR3
chrX139006180139006271-intron-Distal6.9193529.93448K562DGCR8
chrX138959474138959606-intron-Distal4.021324.10688K562KHSRP
chrX139006319139006359-intron-Distal9.59009165.59913K562DGCR8
chrX138993371138993451-intron-Distal3.863553.16986HepG2QKI
chrX138991637138991729-intron-Distal3.171713.71972K562TARDBP
chrX138847968138848027-intron-Distal3.881213.54208HepG2SUGP2
chrX138836443138836484-intron-Distal4.214543.89080K562EXOSC5
chrX139006386139006457-intron-Distal5.6481620.49690K562DGCR8
chrX138998488138998636-intron-Distal5.3924511.62275K562KHSRP
chrX139006189139006260-intron-Distal5.0140013.77977K562DROSHA
chrX138849977138850044-intron-Distal4.092693.24322HepG2MATR3
chrX139006315139006356-intron-Distal7.6648450.45977HepG2DGCR8
chrX139006190139006271-intron-Distal5.1664919.80222HepG2DGCR8
chrX139005834139005956-intron-Distal5.7473823.16720K562DROSHA
chrX138935422138935494-intron-Distal4.425555.04769HepG2PTBP1
chrX139006382139006455-intron-Distal5.2185316.32508HepG2DGCR8
chrX139003107139003198-intron-Distal4.576523.80778HepG2QKI
chrX139006359139006373-intron-Distal5.204616.41859K562DGCR8
chrX139006381139006458-intron-Distal6.1686315.84543K562DROSHA
chrX138815937138816029-intron-Distal3.974753.16986HepG2QKI
chrX139006315139006319-intron-Distal9.45897150.61709K562DGCR8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATP11C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATP11C is not available on ENCORE database.

  • 101 RBPs can affect the levels of ATP11C.  








The Knockdown/knockout RNA-Seq assay for ATP11C is not available on ENCORE database.





101 RBPs can affect the gene expression of ATP11C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATP11CENSG00000101974.10866.67170710.440300.286702.484901.75360HepG2AKAP8L
ATP11CENSG00000101974.10827.17370979.77240-0.244302.081301.47020HepG2AUH
ATP11CENSG00000101974.10329.28890650.43430-0.982008.501506.81500HepG2BCCIP
ATP11CENSG00000101974.10413.18670565.19250-0.451902.351901.52570HepG2BCLAF1
ATP11CENSG00000101974.10494.22250665.48090-0.429203.285102.45290HepG2CALR
ATP11CENSG00000101974.101147.86810574.129600.9994013.8151012.23580HepG2CIRBP
ATP11CENSG00000101974.10336.26930653.12500-0.957706.581605.40190HepG2CNOT7
ATP11CENSG00000101974.101059.01540699.638000.597905.131704.30340HepG2DDX3X
ATP11CENSG00000101974.10560.01240676.48430-0.272601.888001.31190HepG2DKC1
ATP11CENSG00000101974.10450.15270599.65670-0.413703.367802.59700HepG2DNAJC21
ATP11CENSG00000101974.10365.73510594.41230-0.700709.783708.64720HepG2DNAJC2
ATP11CENSG00000101974.10430.54870577.76130-0.424302.335401.78790HepG2EIF2S1
ATP11CENSG00000101974.10444.90990638.52610-0.521203.149702.46860HepG2EIF4A3
ATP11CENSG00000101974.10420.53580621.63380-0.563802.951402.24200HepG2EIF4B
ATP11CENSG00000101974.10691.37760844.27640-0.288202.345401.56390HepG2EIF4G1
ATP11CENSG00000101974.10977.40580735.191500.410702.285201.58260HepG2FIP1L1
ATP11CENSG00000101974.10620.28470339.449100.869609.830908.39530HepG2FUBP3
ATP11CENSG00000101974.10908.39820634.356200.517904.030402.94740HepG2G3BP2
ATP11CENSG00000101974.10609.17970800.01550-0.393202.220001.64310HepG2GPKOW
ATP11CENSG00000101974.10416.07630604.58820-0.539102.766701.65420HepG2GRSF1
ATP11CENSG00000101974.101100.55120680.965700.692503.958302.27750HepG2HLTF
ATP11CENSG00000101974.10427.91070673.41480-0.654205.686004.71940HepG2HNRNPC
ATP11CENSG00000101974.10543.96050670.18700-0.301102.011001.39300HepG2HNRNPF
ATP11CENSG00000101974.101008.61670763.468000.401602.819502.18480HepG2HNRNPLL
ATP11CENSG00000101974.10480.38690668.96140-0.477705.023504.22730HepG2HNRNPU
ATP11CENSG00000101974.10446.98720659.94980-0.562105.009204.06250HepG2IGF2BP1
ATP11CENSG00000101974.101058.45600607.459200.801008.792207.66290HepG2IGF2BP2
ATP11CENSG00000101974.10445.67390683.31900-0.616608.714107.48400HepG2ILF2
ATP11CENSG00000101974.10409.30540636.70970-0.637503.686302.13120HepG2ILF3
ATP11CENSG00000101974.10917.24030610.966400.586103.950002.73380HepG2KHSRP
ATP11CENSG00000101974.10529.91450646.38550-0.286602.333501.39650HepG2KIF1C
ATP11CENSG00000101974.10397.44710616.83150-0.634102.753701.51030HepG2KRR1
ATP11CENSG00000101974.10722.77810994.28310-0.460102.734201.90960HepG2LARP4
ATP11CENSG00000101974.10952.25130663.272800.521603.825803.08660HepG2NCBP2
ATP11CENSG00000101974.10941.91700676.948000.476503.643902.78630HepG2NSUN2
ATP11CENSG00000101974.10391.94370596.93040-0.606902.821701.92280HepG2PABPC1
ATP11CENSG00000101974.10784.95170590.746400.410002.512401.82150HepG2PABPC4
ATP11CENSG00000101974.10479.71990662.13620-0.464904.533203.47930HepG2PARN
ATP11CENSG00000101974.10678.60860564.428800.265701.848801.33540HepG2PCBP1
ATP11CENSG00000101974.10633.97110504.654100.329002.505101.76480HepG2PRPF4
ATP11CENSG00000101974.10761.28190574.319000.406504.103603.46670HepG2PTBP1
ATP11CENSG00000101974.10632.01060810.03050-0.358001.984501.46850HepG2PUF60
ATP11CENSG00000101974.101000.76440859.895900.218802.167701.62980HepG2PUM1
ATP11CENSG00000101974.10860.58100622.019500.468304.459603.69310HepG2QKI
ATP11CENSG00000101974.101043.46300564.515900.8862013.4732012.05160HepG2RBM25
ATP11CENSG00000101974.10882.12760639.168900.464704.975804.28660HepG2NELFE
ATP11CENSG00000101974.10810.76080595.286300.445604.578703.81240HepG2RECQL
ATP11CENSG00000101974.10452.16350721.85170-0.674905.380104.47090HepG2RPLP0
ATP11CENSG00000101974.10976.63310755.692300.369902.640401.95160HepG2SF3B1
ATP11CENSG00000101974.10394.36230631.64890-0.679604.583902.47980HepG2SND1
ATP11CENSG00000101974.10670.021001061.94030-0.6644012.0045011.15640HepG2SRFBP1
ATP11CENSG00000101974.101012.60140624.129700.6980011.4117010.59330HepG2SRSF1
ATP11CENSG00000101974.10474.90400658.41250-0.471404.350503.50850HepG2SRSF7
ATP11CENSG00000101974.10648.54890507.757500.353003.035902.46320HepG2SRSF9
ATP11CENSG00000101974.10376.13970622.77030-0.727402.889301.53070HepG2SUGP2
ATP11CENSG00000101974.10729.20990560.975100.378303.135802.54380HepG2TAF15
ATP11CENSG00000101974.10433.57740744.09990-0.779207.885906.74420HepG2TARDBP
ATP11CENSG00000101974.10744.39400515.477700.530105.169204.03860HepG2TIA1
ATP11CENSG00000101974.10358.84580649.95780-0.8570011.0549010.16990HepG2TIAL1
ATP11CENSG00000101974.10449.79140655.83580-0.544106.261605.47450HepG2TRIM56
ATP11CENSG00000101974.10461.00250628.94960-0.448202.680502.06090HepG2U2AF1
ATP11CENSG00000101974.10470.53140846.76600-0.847702.263901.38180HepG2U2AF2
ATP11CENSG00000101974.10388.86610582.99280-0.584202.718401.72170HepG2UPF2
ATP11CENSG00000101974.10538.42580708.46450-0.395903.539402.87790HepG2UTP3
ATP11CENSG00000101974.10402.19490626.69140-0.639904.448703.53690HepG2XRN2
ATP11CENSG00000101974.101268.61430976.850000.376902.411401.31620K562AARS
ATP11CENSG00000101974.10890.704002348.33840-1.3986034.1260032.26570K562AQR
ATP11CENSG00000101974.101181.410801426.40440-0.271902.705301.41130K562BCCIP
ATP11CENSG00000101974.101049.836501378.48320-0.392905.563904.18820K562BCLAF1
ATP11CENSG00000101974.10884.237301231.14650-0.477504.105403.04090K562BOP1
ATP11CENSG00000101974.101146.061401928.15190-0.750504.938303.46710K562CNOT7
ATP11CENSG00000101974.101704.647002153.49010-0.337204.339502.93300K562CPEB4
ATP11CENSG00000101974.10839.160401309.07240-0.641508.773907.36120K562CPSF6
ATP11CENSG00000101974.10863.179801045.78510-0.276902.259501.32350K562CSTF2
ATP11CENSG00000101974.10982.536501289.12090-0.391804.603302.28510K562DDX24
ATP11CENSG00000101974.10813.680701178.39190-0.534304.734603.52490K562EFTUD2
ATP11CENSG00000101974.101164.906101632.32380-0.486707.530706.43060K562EIF2S2
ATP11CENSG00000101974.10920.296701271.08380-0.465904.508803.46120K562EIF4A3
ATP11CENSG00000101974.10473.219101144.68550-1.2744032.9441029.53810K562EIF4B
ATP11CENSG00000101974.10777.353101000.33810-0.363803.098101.75600K562EXOSC5
ATP11CENSG00000101974.101023.951201585.72950-0.631007.895806.38780K562FIP1L1
ATP11CENSG00000101974.101005.215901331.92990-0.406003.219002.29120K562FMR1
ATP11CENSG00000101974.10884.690001128.92200-0.351702.342201.50580K562FTO
ATP11CENSG00000101974.101529.296901321.874700.210201.859101.34320K562FXR1
ATP11CENSG00000101974.102002.534201418.424000.497403.552202.72780K562G3BP2
ATP11CENSG00000101974.10882.553101249.85030-0.502005.111804.03770K562GPKOW
ATP11CENSG00000101974.101166.966602175.36120-0.8985014.2759012.52990K562GRSF1
ATP11CENSG00000101974.10686.946501069.24540-0.638305.765504.93490K562HNRNPC
ATP11CENSG00000101974.101599.707902013.88180-0.332203.153002.01890K562HNRNPL
ATP11CENSG00000101974.10951.160901304.24970-0.455503.404902.36400K562HNRNPM
ATP11CENSG00000101974.101266.827901685.73130-0.412205.515904.24040K562HNRNPU
ATP11CENSG00000101974.101457.466302149.96230-0.560806.749505.51600K562HSPD1
ATP11CENSG00000101974.10923.022501219.98990-0.402403.577202.57470K562METAP2
ATP11CENSG00000101974.101119.445501511.78030-0.433506.790605.57170K562MTPAP
ATP11CENSG00000101974.101472.818501679.60440-0.189502.138401.47420K562NSUN2
ATP11CENSG00000101974.10769.240801052.52020-0.452303.450401.79330K562NUSAP1
ATP11CENSG00000101974.10987.336101852.38880-0.907807.704705.66940K562PABPC1
ATP11CENSG00000101974.101079.218801555.13850-0.527105.893304.44900K562PCBP2
ATP11CENSG00000101974.102257.676502900.76740-0.361604.076102.36440K562PNPT1
ATP11CENSG00000101974.101077.677001800.06550-0.7401010.560508.66340K562PPIG
ATP11CENSG00000101974.10909.931601146.70570-0.333702.060401.40920K562PRPF8
ATP11CENSG00000101974.10632.89380958.64450-0.599004.292303.12990K562PSIP1
ATP11CENSG00000101974.102561.798103080.22540-0.265902.088401.37930K562PUF60
ATP11CENSG00000101974.102514.950903210.14170-0.352104.932603.63860K562PUM2
ATP11CENSG00000101974.101073.950501628.48770-0.600607.376005.91700K562RBM22
ATP11CENSG00000101974.10849.740201172.62340-0.464602.609401.32310K562RRP9
ATP11CENSG00000101974.101185.411401657.51840-0.483607.353506.07370K562SF3A3
ATP11CENSG00000101974.101196.422001475.61590-0.302602.713401.86720K562SF3B4
ATP11CENSG00000101974.10908.259901557.54670-0.778103.546902.00430K562SFPQ
ATP11CENSG00000101974.101322.277101664.48450-0.332103.115102.36810K562SRSF1
ATP11CENSG00000101974.10699.05310913.84020-0.386502.956401.85840K562SRSF4
ATP11CENSG00000101974.10994.831201571.79920-0.659908.423806.49700K562SRSF5
ATP11CENSG00000101974.101149.908601903.03870-0.726809.109306.78530K562STAU1
ATP11CENSG00000101974.101213.18950978.942200.309402.686301.88030K562SYNCRIP
ATP11CENSG00000101974.101119.692101684.72450-0.589406.264805.16120K562TARDBP
ATP11CENSG00000101974.101259.421301625.06560-0.367703.150002.26830K562TIA1
ATP11CENSG00000101974.10591.01280922.08260-0.641705.633804.25420K562TIAL1
ATP11CENSG00000101974.101242.578801594.29960-0.359603.075101.91230K562TRA2A
ATP11CENSG00000101974.101959.860202645.63330-0.432904.950803.74220K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATP11C is not available on ENCORE database.





16 RBPs can affect the splicing of ATP11C :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATP11CENSG00000101974.10chrX-138869331138869403138867384138867458138870350138870502-0.165000.003200.05245excludedK562SF3B4
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.457000.000030.00228excludedK562PRPF8
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.264000.001670.08737excludedHepG2RBM22
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.621000.000000.00005excludedHepG2U2AF1
SEATP11CENSG00000101974.10chrX-1388138091388139141388085071388111211388200741388202280.159000.000280.06962includedK562PUM1
SEATP11CENSG00000101974.10chrX-138897036138897144138886629138886758138899021138899102-0.453000.000400.00646excludedHepG2U2AF2
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.370000.008380.07924excludedHepG2U2AF2
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.520000.000100.00988excludedHepG2AKAP1
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.369000.000000.00004excludedK562FXR1
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.405000.000610.05613excludedHepG2SRSF7
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.366000.000240.03515excludedHepG2RBFOX2
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.341000.000740.09726excludedK562SRSF7
SEATP11CENSG00000101974.10chrX-138897036138897144138886629138886758138899021138899102-0.167000.003720.05717excludedK562U2AF2
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.229000.005060.07332excludedK562U2AF2
SEATP11CENSG00000101974.10chrX-138869331138869403138867384138867458138870350138870502-0.205000.000820.01699excludedK562U2AF2
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.340000.000060.00422excludedK562TARDBP
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.208000.003120.08889excludedK562HNRNPU
SEATP11CENSG00000101974.10chrX-1388138091388139141388085071388111211388200741388202280.385000.000010.00336includedK562CPSF6
SEATP11CENSG00000101974.10chrX-138813809138813914138808507138811121138820074138820228-0.314000.000120.00835excludedK562HNRNPK
SEATP11CENSG00000101974.10chrX-1388145931388146841388109441388111211388200741388202280.408000.000000.00002includedK562PTBP1
A3SSATP11CENSG00000101974.10chrX-1388822181388823011388822181388822691388843941388845620.129000.002930.01808longerK562AQR
A3SSATP11CENSG00000101974.10chrX-1388808371388809231388808371388809021388822181388823010.108000.007110.03934longerK562AQR
A3SSATP11CENSG00000101974.10chrX-1388970361388971761388970361388971441388990211388991020.062000.005170.02978longerK562AQR
A3SSATP11CENSG00000101974.10chrX-1388278801388280521388278801388280161388321831388323110.067000.000260.00210longerK562AQR
MXEATP11CENSG00000101974.10chrX-1388138091388139141388145931388146841388109441388111211388200741388202280.229000.000000.000061includedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATP11C is not avaliable on ENCORE database.