ARNT

General Information

Gene Name       : ARNT
Gene ID             : ENSG00000143437.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARNT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARNTENSG00000143437.2017.2916.7617.02ENCSR000AEF
HepG2ARNTENSG00000143437.2014.5716.2315.40ENCSR985KAT
K562ARNTENSG00000143437.2024.1923.5123.85ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARNT is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARNT RNA is bound by 26 proteins.  







eCLIP assay for ARNT is not avaliable on ENCORE database.





26 proteins are bound to ARNT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1150783891150783989-3'-UTR,intron-Distal5.1132917.44933K562TARDBP
chr1150784143150784237-3'-UTR,intron-Distal,intron-Proximal4.6223610.34406K562LIN28B
chr1150814899150814962-3'-UTR,CDS,intron-Distal,intron-Proximal4.220678.23042HepG2U2AF2
chr1150790395150790435-3'-UTR,CDS,intron-Distal,intron-Proximal4.037055.64813K562DDX24
chr1150782820150782908-3'-UTR,intron-Distal4.585425.03175K562IGF2BP1
chr1150814886150814959-3'-UTR,CDS,intron-Distal,intron-Proximal3.822359.51959K562U2AF2
chr1150786568150786661-3'-UTR,CDS,intron-Distal,intron-Proximal3.694256.51942K562IGF2BP2
chr1150814934150815057-3'-UTR,CDS,intron-Distal,intron-Proximal6.1459214.07413K562PTBP1
chr1150784318150784411-3'-UTR,intron-Distal,intron-Proximal5.0523112.47085HepG2PCBP2
chr1150814898150814956-3'-UTR,CDS,intron-Distal,intron-Proximal3.315524.24009K562U2AF1
chr1150784179150784252-3'-UTR,intron-Distal3.507868.28622K562PUM2
chr1150782828150782888-3'-UTR,intron-Distal3.086183.26079K562UPF1
chr1150783201150783293-3'-UTR,intron-Distal,intron-Proximal3.857306.55932K562IGF2BP1
chr1150812066150812095-3'-UTR,CDS,intron-Distal,intron-Proximal3.205995.54400K562YBX3
chr1150783324150783398-3'-UTR,intron-Distal,intron-Proximal4.147838.97722K562IGF2BP1
chr1150818739150818777-3'-UTR,CDS,intron-Distal4.638325.10960K562ZNF622
chr1150783899150783950-3'-UTR,intron-Distal4.718443.81167HepG2SUB1
chr1150785647150785703-3'-UTR,CDS,intron-Distal,intron-Proximal3.930554.66686K562DDX24
chr1150849007150849099-5'-UTR,CDS,intron-Distal,intron-Proximal4.194653.45994HepG2NCBP2
chr1150811921150812008-CDS,intron-Distal,intron-Proximal3.063203.00343HepG2GRWD1
chr1150789894150789910-CDS,intron-Distal,intron-Proximal4.636026.85891K562DDX24
chr1150830824150830878-CDS,intron-Distal,intron-Proximal3.380463.91115K562LIN28B
chr1150802288150802384-CDS,intron-Distal,intron-Proximal3.398974.98422K562PRPF8
chr1150802368150802404-CDS,intron-Distal,intron-Proximal3.926425.31213HepG2PRPF8
chr1150808929150808994-CDS,intron-Distal,intron-Proximal3.451965.82046K562SF3B4
chr1150786661150786718-CDS,intron-Distal,intron-Proximal3.116154.59386K562IGF2BP2
chr1150789837150789888-CDS,intron-Distal,intron-Proximal3.120223.05460HepG2PPIG
chr1150804809150804833-CDS,intron-Distal,intron-Proximal4.261623.02457HepG2BCLAF1
chr1150789839150789874-CDS,intron-Distal,intron-Proximal3.928103.01428K562UCHL5
chr1150804332150804380-CDS,intron-Distal,intron-Proximal3.761624.09885HepG2BCLAF1
chr1150807010150807045-CDS,intron-Distal,intron-Proximal4.188414.55369K562LIN28B
chr1150804312150804377-CDS,intron-Distal3.970073.80401K562SRSF1
chr1150801574150801619-CDS,intron-Distal,intron-Proximal3.258643.34848HepG2PPIG
chr1150808959150808981-CDS,intron-Distal,intron-Proximal3.910833.21003K562U2AF2
chr1150786595150786677-CDS,intron-Distal,intron-Proximal3.175024.37507K562DDX24
chr1150789244150789265-CDS,intron-Distal,intron-Proximal4.181375.47926K562AQR
chr1150807020150807116-CDS,intron-Distal3.242564.24070HepG2GRWD1
chr1150804857150804927-CDS,intron-Distal,intron-Proximal4.396875.63851K562SF3B4
chr1150804306150804379-CDS,intron-Distal3.242785.51984K562UCHL5
chr1150804301150804380-CDS,intron-Distal,intron-Proximal4.405538.59814K562DDX24
chr1150804838150804879-CDS,intron-Distal,intron-Proximal3.345603.94979HepG2BCLAF1
chr1150788748150788836-CDS,intron-Distal5.082385.44652K562IGF2BP2
chr1150789286150789371-CDS,intron-Distal,intron-Proximal3.094593.17613K562BUD13
chr1150807081150807146-CDS,intron-Distal,intron-Proximal4.708594.13847K562AQR
chr1150808923150808959-CDS,intron-Distal4.248374.11564K562U2AF2
chr1150804839150804877-CDS,intron-Distal,intron-Proximal4.926437.65820K562LIN28B
chr1150813890150814013-intron-Distal3.189524.70908HepG2QKI
chr1150815931150816007-intron-Distal3.242844.16517K562KHSRP
chr1150802338150802368-intron-Distal,intron-Proximal4.717266.01989HepG2PRPF8
chr1150793910150794032-intron-Distal4.172604.79379K562KHSRP
chr1150789203150789244-intron-Distal,intron-Proximal5.432628.34710K562AQR
chr1150814981150815056-intron-Distal,intron-Proximal5.354877.45191HepG2PTBP1
chr1150814962150815056-intron-Distal,intron-Proximal6.6825623.40769HepG2U2AF2
chr1150808684150808756-intron-Distal,intron-Proximal5.027315.69951K562AQR
chr1150815449150815494-intron-Distal3.549433.06676K562U2AF2
chr1150815176150815266-intron-Distal5.305268.24653K562KHSRP
chr1150815397150815538-intron-Distal3.600917.63715K562KHSRP
chr1150814975150815054-intron-Distal,intron-Proximal3.683405.12778HepG2PCBP2
chr1150814761150814810-intron-Distal,intron-Proximal3.782253.00614K562U2AF2
chr1150815021150815059-intron-Distal,intron-Proximal3.721996.84055K562U2AF2
chr1150814779150814826-intron-Distal,intron-Proximal5.039476.40067K562PTBP1
chr1150815126150815206-intron-Distal4.7403411.35904HepG2U2AF2
chr1150815266150815355-intron-Distal4.346298.98664K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARNT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARNT is not available on ENCORE database.

  • 74 RBPs can affect the levels of ARNT.  








The Knockdown/knockout RNA-Seq assay for ARNT is not available on ENCORE database.





74 RBPs can affect the gene expression of ARNT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARNTENSG00000143437.162128.072701474.807200.528904.677903.48070HepG2ABCF1
ARNTENSG00000143437.16890.853601421.31810-0.674006.019905.26970HepG2AKAP1
ARNTENSG00000143437.16507.51300701.37280-0.466702.353001.49160HepG2BCCIP
ARNTENSG00000143437.16641.65250820.51900-0.354702.935901.74650HepG2DDX1
ARNTENSG00000143437.161004.69570793.124700.341002.611801.72580HepG2DDX24
ARNTENSG00000143437.16882.53060645.262300.451702.779601.48710HepG2DDX27
ARNTENSG00000143437.16891.394801361.50360-0.611105.735004.86450HepG2DDX3X
ARNTENSG00000143437.16564.16980765.03500-0.439403.580502.04600HepG2DDX52
ARNTENSG00000143437.16727.163701169.58710-0.685606.095705.20770HepG2DDX6
ARNTENSG00000143437.161399.83340953.084100.554509.503108.40020HepG2DKC1
ARNTENSG00000143437.161594.496801242.498400.359802.233301.65700HepG2EIF4A3
ARNTENSG00000143437.16837.817501253.66870-0.581405.319304.38030HepG2FXR1
ARNTENSG00000143437.16390.36220659.77870-0.757206.787605.38830HepG2GEMIN5
ARNTENSG00000143437.161352.173501082.378000.321001.914401.37570HepG2GPKOW
ARNTENSG00000143437.161152.58350812.255400.504804.415503.62460HepG2HNRNPA1
ARNTENSG00000143437.16713.01260903.51370-0.341602.246701.61520HepG2HNRNPC
ARNTENSG00000143437.161333.66170977.273400.448506.132105.12170HepG2HNRNPF
ARNTENSG00000143437.16870.805401177.63160-0.435503.514202.73190HepG2HNRNPK
ARNTENSG00000143437.161525.912401032.931700.562805.664404.79720HepG2HNRNPLL
ARNTENSG00000143437.16670.761101027.43840-0.615207.277505.84500HepG2HNRNPM
ARNTENSG00000143437.16687.76830897.53800-0.384104.233803.49670HepG2HNRNPU
ARNTENSG00000143437.161279.33690962.328400.410703.220902.44420HepG2IGF2BP1
ARNTENSG00000143437.16715.09780916.80030-0.358503.282902.49000HepG2ILF2
ARNTENSG00000143437.16949.811501254.10650-0.400902.792902.13530HepG2MAGOH
ARNTENSG00000143437.16854.553601261.11910-0.561504.470903.68660HepG2MATR3
ARNTENSG00000143437.16897.978501205.19200-0.424503.993103.02530HepG2MSI2
ARNTENSG00000143437.16871.358701121.97870-0.364703.495402.63890HepG2NOL12
ARNTENSG00000143437.16666.50680888.37180-0.414504.379203.34310HepG2PARN
ARNTENSG00000143437.16762.932201155.47940-0.598909.956308.91920HepG2PCBP1
ARNTENSG00000143437.161360.598701002.370700.440706.462005.33440HepG2PRPF4
ARNTENSG00000143437.16648.681601029.43460-0.666304.336102.83010HepG2PRPF6
ARNTENSG00000143437.16956.815601175.78420-0.297302.873502.31790HepG2PTBP1
ARNTENSG00000143437.16700.092801136.96190-0.6996015.4570014.28890HepG2PUM1
ARNTENSG00000143437.16670.31150945.07360-0.495602.155301.52760HepG2RAVER1
ARNTENSG00000143437.161591.888101052.867100.596306.634205.64110HepG2RPLP0
ARNTENSG00000143437.161492.635501022.408600.545805.858904.86510HepG2SF3B1
ARNTENSG00000143437.16744.76550932.06570-0.323603.612702.89410HepG2SMN1
ARNTENSG00000143437.16636.72270963.05240-0.596904.057402.87810HepG2SMNDC1
ARNTENSG00000143437.161216.09950960.162900.340803.577902.80080HepG2SRSF7
ARNTENSG00000143437.162488.696501153.203401.1096048.3774046.88030HepG2SSB
ARNTENSG00000143437.16878.911401202.66280-0.452406.710605.81600HepG2SUCLG1
ARNTENSG00000143437.161199.30230872.014300.459703.440002.89470HepG2TIAL1
ARNTENSG00000143437.16561.56440879.92930-0.647907.568006.71270HepG2TRIM56
ARNTENSG00000143437.161215.158201446.95380-0.251902.478401.47700HepG2UTP18
ARNTENSG00000143437.16814.086801359.11170-0.7394015.6936014.43960HepG2UTP3
ARNTENSG00000143437.16636.352001015.22990-0.673904.936803.45930HepG2XPO5
ARNTENSG00000143437.161719.60920989.193500.7977024.3102022.67740HepG2ZC3H8
ARNTENSG00000143437.16682.64420944.02150-0.467702.712301.43350HepG2ZRANB2
ARNTENSG00000143437.165014.443203292.706100.6067020.3865018.96380K562AGGF1
ARNTENSG00000143437.164595.770803426.222300.423605.211504.30270K562AKAP8L
ARNTENSG00000143437.162506.071301932.429300.374903.215302.27340K562BOP1
ARNTENSG00000143437.162979.117002054.663100.535908.463507.07710K562CPSF6
ARNTENSG00000143437.161486.212301761.69720-0.245302.446701.76320K562EIF2S2
ARNTENSG00000143437.161656.036201267.345700.385804.120402.44030K562FUS
ARNTENSG00000143437.161164.597001914.91300-0.717406.645105.76470K562FXR1
ARNTENSG00000143437.16773.059301379.38860-0.8354010.501307.74890K562GEMIN5
ARNTENSG00000143437.161749.971702347.66520-0.423904.869803.86870K562GRSF1
ARNTENSG00000143437.161465.077001753.09320-0.258901.972001.45680K562HNRNPC
ARNTENSG00000143437.161356.349501722.52340-0.344802.305601.46030K562HNRNPM
ARNTENSG00000143437.164847.140903636.035000.414705.434004.19360K562KIF1C
ARNTENSG00000143437.161476.404602151.60310-0.543307.416806.01380K562MAGOH
ARNTENSG00000143437.164226.990803480.615200.280202.442101.45360K562MAK16
ARNTENSG00000143437.164089.208702855.080600.518202.374601.57140K562NAA15
ARNTENSG00000143437.163102.369402501.868200.310307.391906.25480K562NSUN2
ARNTENSG00000143437.163794.054602541.574600.577902.544201.60580K562PABPN1
ARNTENSG00000143437.161576.789501914.45360-0.279902.234801.36010K562PCBP2
ARNTENSG00000143437.161503.219101826.75820-0.281202.648901.86760K562POLR2G
ARNTENSG00000143437.161011.059701746.43540-0.788504.704202.31070K562PRPF6
ARNTENSG00000143437.16838.624901338.86510-0.674907.622206.37140K562PRPF8
ARNTENSG00000143437.161487.048502090.39280-0.491306.673305.67760K562PTBP1
ARNTENSG00000143437.165587.052403397.784500.717406.577905.78190K562PUS1
ARNTENSG00000143437.164649.307403310.701900.489809.998708.89850K562RBM15
ARNTENSG00000143437.161502.414802004.61540-0.416004.100803.05500K562RBM22
ARNTENSG00000143437.161609.524002109.49530-0.390303.368302.14790K562NELFE
ARNTENSG00000143437.162044.846002679.09040-0.389803.363602.25170K562RPS3
ARNTENSG00000143437.164111.293602669.326000.623002.640801.45140K562SNRNP200
ARNTENSG00000143437.162027.873402586.44500-0.351003.730702.48050K562SRSF4
ARNTENSG00000143437.162457.599102052.332400.259902.965201.75170K562SRSF7
ARNTENSG00000143437.161330.200002074.04880-0.640808.085206.79810K562TARDBP
ARNTENSG00000143437.161991.883901511.829200.397703.240402.22150K562TIAL1
ARNTENSG00000143437.163155.699002533.116000.316905.383103.60420K562TROVE2
ARNTENSG00000143437.163273.445802652.779000.303205.125604.17900K562UPF1
ARNTENSG00000143437.162877.686102269.907300.342203.096502.17290K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARNT is not available on ENCORE database.





20 RBPs can affect the splicing of ARNT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARNTENSG00000143437.16chr1-1508148991508149441508120571508121301508187381508187830.118000.003300.05447includedK562SRSF1
SEARNTENSG00000143437.16chr1-150802379150802456150801568150801703150804293150804379-0.096000.000490.01162excludedK562SF3B4
SEARNTENSG00000143437.16chr1-150814899150814944150812083150812130150818738150818783-0.138000.006700.09222excludedK562SF3B4
SEARNTENSG00000143437.16chr1-150789263150789366150788734150788882150789557150789678-0.084000.000250.00622excludedHepG2U2AF1
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.133000.000280.01156excludedK562AKAP8L
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.275000.000020.03103excludedK562RBFOX2
SEARNTENSG00000143437.16chr1-150789263150789366150788734150788882150789557150789678-0.082000.002280.02810excludedHepG2U2AF2
SEARNTENSG00000143437.16chr1-150801568150801703150799018150799093150804293150804379-0.129000.005900.05329excludedK562AQR
SEARNTENSG00000143437.16chr1-150802379150802441150801568150801703150804293150804379-0.058000.005330.06532excludedK562PUS1
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.117000.007170.08157excludedK562PUS1
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.205000.000010.00465excludedK562MTPAP
SEARNTENSG00000143437.16chr1-150814899150814944150812057150812130150818738150818783-0.185000.000010.00143excludedHepG2FTO
SEARNTENSG00000143437.16chr1-1507903951507905061507898361507899091507956691507958210.139000.000500.06960includedK562LARP4
SEARNTENSG00000143437.16chr1-1507903951507905061507898361507899091507956691507958210.070000.000040.01659includedK562SBDS
SEARNTENSG00000143437.16chr1-150789263150789366150788734150788882150789557150789678-0.080000.000150.00659excludedHepG2SF3A3
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.186000.000230.00943excludedHepG2SF3A3
SEARNTENSG00000143437.16chr1-1508148991508149441508120831508121301508187381508187830.134000.000620.08816includedK562FXR2
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.202000.000000.00003excludedHepG2RBFOX2
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.306000.000060.00453excludedHepG2SF3B4
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.154000.002520.04204excludedK562U2AF2
SEARNTENSG00000143437.16chr1-150814899150814944150812057150812130150818738150818783-0.115000.002630.05646excludedK562RBM15
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.215000.000010.02097excludedK562QKI
SEARNTENSG00000143437.16chr1-150814899150814944150811916150812130150818738150818783-0.158000.000880.04050excludedK562HNRNPK
SEARNTENSG00000143437.16chr1-1508095611508096571508087551508089691508119161508121300.108000.002190.03664includedK562HNRNPC
A3SSARNTENSG00000143437.16chr1-1508070131508071811508070131508071161508087551508089690.071000.000070.00382longerK562U2AF2
A3SSARNTENSG00000143437.16chr1-1508070131508071811508070131508071161508087551508089690.196000.000000.00001longerHepG2U2AF2
A3SSARNTENSG00000143437.16chr1-1508070131508071811508070131508071161508087551508089690.090000.000000.00001longerK562AQR
A3SSARNTENSG00000143437.16chr1-1508070131508071811508070131508071161508087551508089690.100000.001480.05567longerHepG2U2AF1
A3SSARNTENSG00000143437.16chr1-1508252371508253161508252371508252821508308241508309360.083000.000250.01502longerK562U2AF1
MXEARNTENSG00000143437.16chr1-150811916150812130150825237150825282150808755150808969150830824150830936-0.100000.000550.020862includedK562RBM15
MXEARNTENSG00000143437.16chr1-1508148991508149441508187381508187831508119161508121301508308241508309360.125000.006650.085091includedK562PUS1
MXEARNTENSG00000143437.16chr1-150811916150812130150814899150814944150808755150808969150818738150818783-0.208000.002100.066282includedHepG2TAF15
MXEARNTENSG00000143437.16chr1-1508148991508149441508187381508187831508119161508121301508308241508309360.138000.000340.018961includedK562AKAP8L
MXEARNTENSG00000143437.16chr1-150818738150818783150825237150825282150811916150812130150830824150830936-0.056000.010350.098632includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARNT is not avaliable on ENCORE database.