Experiment Information (Status: Released)

RBP	ELAVL4
gene_aliases
Status	Released
Status_date	2022-07-15
Project	ENCODE3
Note
ID	69

Motif Logo

Sample Information

Sample_Name	Sample_Type	Read_size_range	rbns_protein_concentration	FILE_ID
ELAVL4-1300	RBNS	20-20	1300	ELAVL4_1300.fastq.gz
ELAVL4-20	RBNS	20-20	20	ELAVL4_20.fastq.gz
ELAVL4-320	RBNS	20-20	320	ELAVL4_320.fastq.gz
ELAVL4-5	RBNS	20-20	5	ELAVL4_5.fastq.gz
ELAVL4-80	RBNS	20-20	80	ELAVL4_80.fastq.gz
ELAVL4-input	CN	20-20	0	ELAVL4_input.fastq.gz

Data Submission Information

ENCODE_alias	ENCODE_accession	object_type	assay_type	Sample_ID	SAMPLENAMEID	Selected	Status	Status_Date	Project	protocol_folder	protocol_file_name	ID
chris-burge:ELAVL4	ENCSR171TTH	experiment	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8005
chris-burge:ELAVL4-input-cntl	ENCSR593LSP	experiment	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8006
chris-burge:lib-ELAVL4-1	ENCLB530QER	library	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8197
chris-burge:lib-ELAVL4-2	ENCLB569TSJ	library	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8198
chris-burge:lib-ELAVL4-3	ENCLB688AUF	library	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8199
chris-burge:lib-ELAVL4-4	ENCLB345BZS	library	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8200
chris-burge:lib-ELAVL4-5	ENCLB778GDJ	library	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8201
chris-burge:lib-ELAVL4-input-cntl	ENCLB790MOR	library	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-12	ENCODE3			8202
chris-burge:ELAVL4_1300.fastq.gz	ENCFF639TKW	file_fastq	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			8671
chris-burge:ELAVL4_20.fastq.gz	ENCFF177IIK	file_fastq	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			8672
chris-burge:ELAVL4_320.fastq.gz	ENCFF729VNY	file_fastq	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			8673
chris-burge:ELAVL4_5.fastq.gz	ENCFF144IPW	file_fastq	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			8674
chris-burge:ELAVL4_80.fastq.gz	ENCFF947KRL	file_fastq	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			8675
chris-burge:ELAVL4_input.fastq.gz	ENCFF418KRY	file_fastq	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			8676
chris-burge:ELAVL4_enrichment_R.4mers.txt	ENCFF183CKH	file_enrichment	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9074
chris-burge:ELAVL4_enrichment_R.5mers.txt	ENCFF842JHX	file_enrichment	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9075
chris-burge:ELAVL4_enrichment_R.6mers.txt	ENCFF495WZV	file_enrichment	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9076
chris-burge:ELAVL4_enrichment_R.7mers.txt	ENCFF221RQV	file_enrichment	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9077
chris-burge:ELAVL4_est_binding_frac.4mers.txt	ENCFF803LGU	file_library-fraction	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9078
chris-burge:ELAVL4_est_binding_frac.5mers.txt	ENCFF797VXM	file_library-fraction	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9079
chris-burge:ELAVL4_est_binding_frac.6mers.txt	ENCFF733WCR	file_library-fraction	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9080
chris-burge:ELAVL4_est_binding_frac.7mers.txt	ENCFF736UWG	file_library-fraction	RNA Bind-n-Seq	ELAVL4		Yes	Released	2022-07-14	ENCODE3			9081

File Information

file_name	file_format	output_type	assay_type	lab	derived_from	controlled_by	Project	Note
ELAVL4.logo.png	png	document	RNA Bind-n-Seq	Burge Lab			ENCODE3
ELAVL4_1300.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		ELAVL4_input.fastq.gz	ENCODE3
ELAVL4_20.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		ELAVL4_input.fastq.gz	ENCODE3
ELAVL4_320.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		ELAVL4_input.fastq.gz	ENCODE3
ELAVL4_5.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		ELAVL4_input.fastq.gz	ENCODE3
ELAVL4_80.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab		ELAVL4_input.fastq.gz	ENCODE3
ELAVL4_input.fastq.gz	fastq	reads	RNA Bind-n-Seq	Burge Lab			ENCODE3
ELAVL4_enrichment_R.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_est_binding_frac.4mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_enrichment_R.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_est_binding_frac.5mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_enrichment_R.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_est_binding_frac.6mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_enrichment_R.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3
ELAVL4_est_binding_frac.7mers.txt	tsv	enrichment	RNA Bind-n-Seq	Burge Lab	ELAVL4_1300.fastq.gz,ELAVL4_20.fastq.gz,ELAVL4_320.fastq.gz,ELAVL4_5.fastq.gz,ELAVL4_80.fastq.gz,ELAVL4_input.fastq.gz		ENCODE3