AFF4      CRISPR in K562      Batch: BGKcLV53

Experiment Information (Status: Sequencing)
BGKcLV53-5BGKcLV53-6
idx00
TRCN#_or_BGC#BGC#0001311BGC#0001311
shRNA_or_gRNA_sequenceAGTAGCCAGCGGACCAGCGCAGTAGCCAGCGGACCAGCGC
PAMAGGAGG
NameAFF4_93AFF4_93
Sample_IDBGKcLV53-5BGKcLV53-6
transduction_Date2/24/262/24/26
daysD6D6
RBP_nameAFF4AFF4
qPCR_result37.718.7
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc40124131
WB_result63.780.4
Ave_WB
WB_DONE_date3/10/26
MW127kd
IP
antibody_Cat#A302-538Alot# 2
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID63636364




Western Blot
Western Blot info was not avaliable




Experiment Status
BGKcLV53-5BGKcLV53-6
Sample_IDBGKcLV53-5BGKcLV53-6
Sample Name
Sample NameAFF4-BGKcLV53-5AFF4-BGKcLV53-6
RBPAFF4AFF4
Cell_LineK562K562
Exp UID
StatusSequencingSequencing
Status_date2026-06-022026-06-02
ProjectENCORE2ENCORE2
Note
ID1478614787




Library-Prep Information
BGKcLV53-5BGKcLV53-6
Sample #3738
Sample NameAFF4-BGKcLV53-5AFF4-BGKcLV53-6
Sample_Name_Alias
Index Well PositionC06D06
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2026-05-262026-05-26
Lib_IDLib-260526Lib-260526
Tecan_Location
Tecan
Tecan_date
Size_bp284289
Peak_Molarity81.5065.50
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2026-05-272026-05-27
Sample_IDBGKcLV53-5BGKcLV53-6
RBPAFF4AFF4
Batch_IDBGKcLV53BGKcLV53
WB_result63.70080.400
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48764877




Sequencing Information
Sequencing info was not avaliable




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database