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APEX1
CRISPR
in K562
Control:
NT-BGKcLV13
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
APEX1
Cell_Line
K562
Method
CRISPR
Exp_Name
APEX1-BGKcLV13-K562
ENCODE_series_ID
ENCSR645SRS
Batch_ID
BGKcLV13
Pool ID
Pool-190423
Local_Set_Name
set42
ENCODE_KD_Exp_ID
ENCSR989ZNZ
ENCODE_CN_Exp_ID
ENCSR712CQC
Rep1
APEX1-BGKcLV13-3
Rep2
APEX1-BGKcLV13-4
CN1
NT-BGKcLV13-1
CN2
NT-BGKcLV13-2
Rep1_qPCR
28.3
Rep2_qPCR
39.9
Rep1_WB
70.4
Rep2_WB
71.9
Antibody Cat#
MA1-440
Antibody Lot#
LOT# TB260470
Antibody DCC ID
ENCAB328DHC
Status
Released
Project
ENCODE4
ID
164
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGKcLV13-7
BGKcLV13-8
idx
452
453
TRCN#_or_BGC#
BGC#0000306
BGC#0000306
shRNA_or_gRNA_sequence
AGGCCGAGGTCTGGTACGAC
AGGCCGAGGTCTGGTACGAC
PAM
tgg
tgg
Name
APEX1_96
APEX1_96
Sample_ID
BGKcLV13-7
BGKcLV13-8
transduction_Date
11/28/18
11/28/18
days
Day 6
Day 6
RBP_name
APEX1
APEX1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
4072
4225
WB_result
34.6
38.4
Ave_WB
36.5
WB_DONE_date
1/4/19
MW
35KD
IP
MOUSE
antibody_Cat#
MA1-440
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
0
0
Rep2_TPM
0
0
Action
Library_start_date
repeat_library
Note
ID
4556
4557
Western Blot
Western Blot info was not avaliable
Experiment Status
BGKcLV13-7
BGKcLV13-8
Sample_ID
BGKcLV13-7
BGKcLV13-8
Sample Name
Sample Name
RBP
APEX1
APEX1
Cell_Line
K562
K562
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2019-08-10
2019-08-10
Project
ENCODE4
ENCODE4
Note
ID
2919
2920
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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