UTP3      shRNA in K562      Control: NT-BGKLV38-D

General Information
RBPUTP3
Cell_LineK562
MethodshRNA
Exp_NameUTP3-BGKLV38-K562
ENCODE_series_IDENCSR084HQG
Batch_IDBGKLV38
Pool IDPool-181119
Local_Set_Nameset41_spikeins
ENCODE_KD_Exp_IDENCSR473KFO
ENCODE_CN_Exp_IDENCSR655JYC
Rep1UTP3-BGKLV38-103D
Rep2UTP3-BGKLV38-104D
CN1NT-BGKLV38-1D
CN2NT-BGKLV38-2D
Rep1_qPCR78.6
Rep2_qPCR76.4
Rep1_WB51.7
Rep2_WB50.8
Antibody Cat#A302-067A
Antibody Lot#A302-067A
Antibody DCC IDENCAB872CCU
StatusReleased
ProjectENCODE4
ID884




Experiment Information (Status: NotSatisfied)
BGKLV38-105BGKLV38-106
idx876877
TRCN#_or_BGC#TRCN0000136463TRCN0000136463
shRNA_or_gRNA_sequenceCCGGCCTGTCATAGAAAGGCTTGTTCTCGAGAACAAGCCTTTCTATGACAGGTTTTTTGCCGGCCTGTCATAGAAAGGCTTGTTCTCGAGAACAAGCCTTTCTATGACAGGTTTTTTG
PAM
NameUTP3UTP3
Sample_IDBGKLV38-105BGKLV38-106
transduction_Date9/15/169/15/16
days
RBP_nameUTP3UTP3
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc32993222
WB_result26.319.3
Ave_WB22.8
WB_DONE_date10/19/16
MW55kDa
IP11
antibody_Cat#A302-067AA302-067A
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM42.80
Rep2_TPM29.40
Action
Library_start_date
repeat_library
Note
ID973974




Western Blot
Western Blot info was not avaliable




Experiment Status
BGKLV38-105BGKLV38-106
Sample_IDBGKLV38-105BGKLV38-106
Sample Name
Sample Name
RBPUTP3UTP3
Cell_LineK562K562
Exp UID
StatusNotSatisfiedNotSatisfied
Status_date2019-06-262019-06-26
ProjectENCODE3ENCODE3
Note
ID17671768




Library-Prep Information
Library info was not avaliable




Sequencing Information
Sequencing info was not avaliable




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database