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UPF1
shRNA
in K562
Control:
NT_BGKLV34
General Information
Experiment Information
Sequencing Information
Data Submission
Files
General Information
RBP
UPF1
Cell_Line
K562
Method
shRNA
Exp_Name
UPF1-BGKLV34-K562
ENCODE_series_ID
ENCSR531KGW
Batch_ID
BGKLV34
Pool ID
Pool-160912
Local_Set_Name
set34
ENCODE_KD_Exp_ID
ENCSR251ABP
ENCODE_CN_Exp_ID
ENCSR174OYC
Rep1
UPF1_BGKLV34-43
Rep2
UPF1_BGKLV34-44
CN1
NT_BGKLV34-1
CN2
NT_BGKLV34-2
Rep1_qPCR
59.7
Rep2_qPCR
51.8
Rep1_WB
66.6
Rep2_WB
53.2
Antibody Cat#
RN108PW
Antibody Lot#
RN108PW
Antibody DCC ID
ENCAB730BOO
Status
Released
Project
ENCODE3
ID
727
Experiment Information
Western Blot
Experiment Status
Experiment Information (Status:
NotSatisfied
)
BGKLV34-45
BGKLV34-46
idx
708
709
TRCN#_or_BGC#
TRCN0000022257
TRCN0000022257
shRNA_or_gRNA_sequence
PAM
Name
UPF1
UPF1
Sample_ID
BGKLV34-45
BGKLV34-46
transduction_Date
11/4/2015
11/4/2015
days
RBP_name
UPF1
UPF1
qPCR_result
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc
2032
2260
WB_result
Ave_WB
WB_DONE_date
MW
IP
antibody_Cat#
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM
27.21384307
0
Rep2_TPM
21.78873983
0
Action
Library_start_date
repeat_library
Note
ID
797
798
Western Blot
Western Blot info was not avaliable
Experiment Status
BGKLV34-45
BGKLV34-46
Sample_ID
BGKLV34-45
BGKLV34-46
Sample Name
Sample Name
RBP
UPF1
UPF1
Cell_Line
K562
K562
Exp UID
Status
NotSatisfied
NotSatisfied
Status_date
2019-06-26
2019-06-26
Project
ENCODE3
ENCODE3
Note
ID
1647
1648
Library-Prep
Sequencing
Library-Prep Information
Library info was not avaliable
Sequencing Information
Sequencing info was not avaliable
Data Submission Information
DCC submission information was not avaliable
File Information
Files of the experiment was not avaliable in the database
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