EXOSC1      CRISPR in HepG2      Batch: BGHcLV50

Experiment Information (Status: Sequenced)
BGHcLV50-49BGHcLV50-50
idx00
TRCN#_or_BGC#BGC#0001418BGC#0001418
shRNA_or_gRNA_sequenceCCTGTGAGATACTGCATCCCCCTGTGAGATACTGCATCCC
PAMCGGCGG
NameEXOSC1_86EXOSC1_86
Sample_IDBGHcLV50-49BGHcLV50-50
transduction_Date7/29/257/29/25
daysD6D6
RBP_nameEXOSC1EXOSC1
qPCR_result39.935.1
Ave_qPCR
RT-qPCR_primer-F
RT-qPCR_primer-R
protein_conc38833334
WB_result73.270.3
Ave_WB
WB_DONE_date8/19/25
MW21kd
IP
antibody_Cat#A303-885Alot # 1
Antibody DCC ID
submitted_to_DCC_date
Rep1_TPM00
Rep2_TPM00
ActionReadyReady
Library_start_date
repeat_library
Note
ID1005110052




Western Blot
Western Blot info was not avaliable




Experiment Status
BGHcLV50-49BGHcLV50-50
Sample_IDBGHcLV50-49BGHcLV50-50
Sample Name
Sample NameEXOSC1-BGHcLV50-49EXOSC1-BGHcLV50-50
RBPEXOSC1EXOSC1
Cell_LineHepG2HepG2
Exp UID
StatusSequencedSequenced
Status_date2025-10-302025-10-30
ProjectENCORE2ENCORE2
Note
ID1445614457




Library-Prep Information
BGHcLV50-49BGHcLV50-50
Sample #910
Sample NameEXOSC1-BGHcLV50-49EXOSC1-BGHcLV50-50
Sample_Name_Alias
Index Well PositionA11B11
Index_tableIDT_UniqueDualIndex_96_V2IDT_UniqueDualIndex_96_V2
LibPrep_date2025-10-012025-10-01
Lib_IDLib-251001Lib-251001
Tecan_Location
Tecan
Tecan_date
Size_bp287293
Peak_Molarity94.6085.80
libSampleQC_DNA_Well
RIN
libSample_RNA_Well
SampleQC_methodTapeStation_2022TapeStation_2022
SampleQC_date2025-10-032025-10-03
Sample_IDBGHcLV50-49BGHcLV50-50
RBPEXOSC1EXOSC1
Batch_IDBGHcLV50BGHcLV50
WB_result73.20070.300
Library DescriptionTruSeq mRNATruSeq mRNA
Repeat_Library_Suffix
Lib_StatusSendToSequenceSendToSequence
ProjectENCORE2ENCORE2
ID48244825




Sequencing Information
BGHcLV50-49BGHcLV50-50
Sample_IDBGHcLV50-49BGHcLV50-50
Sample NameEXOSC1-BGHcLV50-49EXOSC1-BGHcLV50-50
Pool IDPool-251003Pool-251003
LocalServer_folder
total_reads00
total_aligned_reads00
unique_aligned_reads00
percent_uniqueAligned
correlation_replicates
spikein_reads00
percent_spikeins
original_ReadLength
QC_StatusReadyToQCReadyToQC
ID34793480




Data Submission Information
DCC submission information was not avaliable




File Information
Files of the experiment was not avaliable in the database